Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|006170
Gene name
Locationscaffold_1:1504742..1507228
Strand-
Gene length (bp)2486
Transcript length (bp)1464
Coding sequence length (bp)1464
Protein length (aa) 488

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.4E-28 45 412

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 1 485 9.0E-154
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 22 470 2.0E-62
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 458 1.0E-57
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 16 487 5.0E-57
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 486 2.0E-50
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 1 485 9.0E-154
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 22 470 2.0E-62
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 458 1.0E-57
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 16 487 5.0E-57
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 486 2.0E-50
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 4 487 1.0E-33
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 32 485 7.0E-32
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 4 485 2.0E-31
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 2 485 6.0E-29
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 24 458 2.0E-26
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 20 424 2.0E-26
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 17 477 1.0E-23
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 23 479 9.0E-22
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 3 485 2.0E-21
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 15 473 9.0E-20
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 13 485 1.0E-19
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 17 460 2.0E-19
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 45 345 6.0E-19
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 30 344 2.0E-17
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 21 368 2.0E-17
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 1 455 1.0E-16
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 30 337 1.0E-15
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 48 297 3.0E-15
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 32 350 4.0E-11
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 113 252 2.0E-09
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 25 222 2.0E-08
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 22 222 1.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

Domain # Start End Length
1 78 100 22
2 107 129 22
3 133 155 22
4 167 189 22
5 199 221 22
6 269 291 22
7 306 325 19
8 334 356 22
9 361 383 22
10 395 416 21
11 426 448 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|006170
MKSDEFPSKHVEDVLEQDVSPSKDFSAAEEGKLRRKFDICLLAPLSFMYLCNALDKGNVGNAKTAGWDKDIGLTG
NQYYVLVMVFYVPFCLFGTPIALLAKRFSAARVLPIMMVGFGSMSLLSTIARGFSQVFAIRWFLGIFEAAMLPGV
LFYLSTFYKRNELASRLGVFYAMSAISGAFSGLIAFGVFQLKHSKYKGWQFLFWIEGGSTVIFAAFAFLWLPRSP
STWWYLNDREKKIARMRILADSSVTVDEELSLRDSIRPLASPMYWLWAVVNLTFGVPLASVNNFLPQIVASLDYP
TVKTNLFTVAPNIVGALTLVALTFSSDYFRERSIHICIPLVIGLVGFIILGSIDVVRNKGVAYFACFLLTMGAFV
PSVLVATWYSNNTPHESRRALIAGIMVAIANSAGLISTNVFREQDEPKYLPALITCAVSGAICFIVVAGIGLWMR
LDNRKRNKAQGVAIRPQDVKTENLAAGPESPLFRYMY*
Coding >AgabiH97|006170
ATGAAGTCAGACGAATTTCCAAGCAAACATGTGGAAGATGTCCTTGAACAGGATGTGTCGCCCTCTAAAGATTTC
AGTGCCGCCGAAGAAGGAAAACTGAGGCGCAAATTTGACATATGTTTGCTGGCACCCTTGTCATTCATGTATCTG
TGCAACGCGCTCGACAAGGGCAATGTTGGCAACGCAAAGACGGCGGGTTGGGACAAAGACATTGGCTTGACCGGA
AACCAGTATTACGTTCTCGTCATGGTTTTCTATGTACCATTTTGCCTCTTTGGCACACCGATAGCACTTCTTGCA
AAACGCTTTTCTGCAGCTCGTGTGCTTCCAATAATGATGGTCGGCTTCGGCTCTATGTCTCTTCTATCGACAATT
GCGCGAGGATTTTCTCAGGTGTTTGCGATTCGCTGGTTTTTGGGAATATTTGAGGCTGCAATGCTTCCCGGGGTA
TTGTTCTACCTTTCGACATTCTACAAGAGGAATGAGCTCGCTTCAAGGCTCGGCGTGTTCTATGCTATGTCCGCC
ATATCAGGCGCTTTCTCCGGGCTGATCGCATTTGGTGTGTTCCAACTCAAACACTCGAAGTACAAGGGGTGGCAA
TTTTTATTCTGGATTGAAGGTGGATCGACCGTTATTTTTGCTGCCTTTGCCTTCCTCTGGCTTCCCCGTTCACCT
TCCACGTGGTGGTACCTAAATGACCGCGAAAAAAAAATTGCACGAATGAGAATATTAGCAGATTCTTCCGTAACG
GTCGACGAAGAGCTTAGTCTTCGTGACAGTATCAGACCCCTTGCGAGTCCAATGTATTGGCTCTGGGCAGTTGTT
AACCTGACATTTGGTGTTCCTTTGGCGAGTGTCAATAATTTCTTGCCTCAAATTGTCGCTAGTCTCGACTATCCC
ACCGTCAAAACCAATCTCTTCACGGTGGCCCCGAACATAGTCGGGGCACTGACATTGGTTGCACTGACATTTTCC
TCTGATTATTTCCGGGAGCGGTCGATTCATATCTGCATACCACTCGTGATTGGACTCGTGGGCTTCATTATTCTG
GGAAGTATTGATGTTGTCCGTAACAAAGGTGTCGCCTACTTTGCGTGCTTCCTTCTTACCATGGGTGCATTTGTG
CCATCGGTCCTTGTAGCTACCTGGTATTCAAATAACACTCCGCATGAATCTCGGCGTGCATTGATTGCCGGAATA
ATGGTCGCCATCGCGAATTCTGCCGGGTTAATTTCAACGAACGTTTTTCGAGAACAGGATGAGCCGAAATATCTG
CCAGCGCTGATAACATGTGCTGTATCTGGGGCGATCTGTTTTATCGTCGTTGCGGGAATAGGTCTTTGGATGAGG
CTTGATAACAGAAAAAGAAATAAGGCACAGGGAGTCGCCATAAGACCACAGGACGTCAAGACGGAGAACCTGGCG
GCCGGACCAGAATCTCCCCTTTTCCGTTATATGTACTGA
Transcript >AgabiH97|006170
ATGAAGTCAGACGAATTTCCAAGCAAACATGTGGAAGATGTCCTTGAACAGGATGTGTCGCCCTCTAAAGATTTC
AGTGCCGCCGAAGAAGGAAAACTGAGGCGCAAATTTGACATATGTTTGCTGGCACCCTTGTCATTCATGTATCTG
TGCAACGCGCTCGACAAGGGCAATGTTGGCAACGCAAAGACGGCGGGTTGGGACAAAGACATTGGCTTGACCGGA
AACCAGTATTACGTTCTCGTCATGGTTTTCTATGTACCATTTTGCCTCTTTGGCACACCGATAGCACTTCTTGCA
AAACGCTTTTCTGCAGCTCGTGTGCTTCCAATAATGATGGTCGGCTTCGGCTCTATGTCTCTTCTATCGACAATT
GCGCGAGGATTTTCTCAGGTGTTTGCGATTCGCTGGTTTTTGGGAATATTTGAGGCTGCAATGCTTCCCGGGGTA
TTGTTCTACCTTTCGACATTCTACAAGAGGAATGAGCTCGCTTCAAGGCTCGGCGTGTTCTATGCTATGTCCGCC
ATATCAGGCGCTTTCTCCGGGCTGATCGCATTTGGTGTGTTCCAACTCAAACACTCGAAGTACAAGGGGTGGCAA
TTTTTATTCTGGATTGAAGGTGGATCGACCGTTATTTTTGCTGCCTTTGCCTTCCTCTGGCTTCCCCGTTCACCT
TCCACGTGGTGGTACCTAAATGACCGCGAAAAAAAAATTGCACGAATGAGAATATTAGCAGATTCTTCCGTAACG
GTCGACGAAGAGCTTAGTCTTCGTGACAGTATCAGACCCCTTGCGAGTCCAATGTATTGGCTCTGGGCAGTTGTT
AACCTGACATTTGGTGTTCCTTTGGCGAGTGTCAATAATTTCTTGCCTCAAATTGTCGCTAGTCTCGACTATCCC
ACCGTCAAAACCAATCTCTTCACGGTGGCCCCGAACATAGTCGGGGCACTGACATTGGTTGCACTGACATTTTCC
TCTGATTATTTCCGGGAGCGGTCGATTCATATCTGCATACCACTCGTGATTGGACTCGTGGGCTTCATTATTCTG
GGAAGTATTGATGTTGTCCGTAACAAAGGTGTCGCCTACTTTGCGTGCTTCCTTCTTACCATGGGTGCATTTGTG
CCATCGGTCCTTGTAGCTACCTGGTATTCAAATAACACTCCGCATGAATCTCGGCGTGCATTGATTGCCGGAATA
ATGGTCGCCATCGCGAATTCTGCCGGGTTAATTTCAACGAACGTTTTTCGAGAACAGGATGAGCCGAAATATCTG
CCAGCGCTGATAACATGTGCTGTATCTGGGGCGATCTGTTTTATCGTCGTTGCGGGAATAGGTCTTTGGATGAGG
CTTGATAACAGAAAAAGAAATAAGGCACAGGGAGTCGCCATAAGACCACAGGACGTCAAGACGGAGAACCTGGCG
GCCGGACCAGAATCTCCCCTTTTCCGTTATATGTACTGA
Gene >AgabiH97|006170
ATGAAGTCAGACGAATTTCCAAGCAAACATGTGGAAGATGTCCTTGAACAGGATGTGTCGCCCTCTAAAGATTTC
AGTGCCGCCGAAGAAGGAAAACTGAGGCGCAAATTTGACATATGTTTGCTGGCACCCTTGTCATTCATGTGAGTG
GTATTATATCTGATATACATAGTTTTCTCATCATTCAACTTTGTCTTTAGGTATCTGTGCAACGCGCTCGACAAG
GGCAATGTTGGCAACGCAAAGACGGCGGGTTGGGACAAAGTGAGGATCATTTGAACGATCGATTCCGATGCAGCT
AAAGAAGGTAACAATCAGGACATTGGCTTGACCGGAAACCAGGTATGCGACTACCAGCTTTACGATGAATGTGAA
CAATGGGAAAACCATAATTTCCTTTAGTATTACGTTCTCGTCATGGTTTTCTATGTGTGTCGTTTCCCGCTCCGA
TGCGCAGCTCAGACTCACATGTGCTAAAGGTACCATTTTGCCTGTGAGTAGGTCTCCTAAATCCGTTGCTTCTTA
CCATGCAAACGGTCGGATACAAAGCTTTGGCACACCGATAGCACTTCTTGCAAAACGCTTTTCTGCAGCTCGTGT
GCTTCCAATAATGATGGTCGGCTTCGTACGTTCCTTACGTTCCTTATCAGTCACATTTCTTTTATTTCAATTACG
TCGACAGGGCTCTATGTCAGTGTTTTCTCAATAATTATCAGGAAGCTAGTTCATTTACAGCTTCAGGTCTCTTCT
ATCGACAATTGCGCGAGGATTTTCTCGTAAGTCTAAATAATTATATCTATATGTCCAAGACGAGAGCTCACTCCC
ATTGAAGAGGTGTTTGCGATTCGCTGGTTTTTGGGAATATTTGAGGCTGCAATGCTTCCCGGGGTATTGTTCTAC
CTTTCGACATTCTACAAGAGGAATGAGCTCGCTTCAAGGCTCGGCGTGTTCTATGGTAACGATGTTCCGTTGGAA
TCTGTTTTCTTTCCACCTGACATTCTTCCTCTTTCCACAGCTATGTCCGCCATATCAGGCGCTTTCTCCGGTAAG
TAGACTGCGCTCAAAGTCCTAGAAGCAGGAAACTCGATTTTGTAGGGCTGATCGCATTTGGTGTGTTCCAACTCA
AACACTCGAAGTACAAGGGGTGGCAATTTTTATTCTGGATTGAAGGTATTCATCACAATGAATTCCTTAGGACAT
CCAGCGATTTTACTTACTCCAGGTGGATCGACCGTTATTTTTGCTGCCTTTGCCTTCCTCTGGCTTCCCCGTTCA
CCTTCCACGTGGTGGTACCTAAATGACCGCGAAAAAAAAATTGCACGAATGAGAATATTAGCAGATTCTTCCGTA
ACGGTCGACGAAGAGCTTAGTCTTCGTGACAGTATCAGACCCCTTGCGAGTCCAATGTATTGGTATGACCAGGAT
TTTCAGTGCCGCTGTTGATTAATGATTCTGATGTGGTGTGGTAGGCTCTGGGCAGTTGTTAACCTGACATTTGGT
GTTCCTTTGGCGAGTGTCAATAATTTCTTGCCTCAAATTGTCGCTAGTCTCGACTATCCCACCGTCAAAACCAAT
CTCTTCACGGTGGCCCCGAACATAGTCGGGGCACTGACATTGGTTGCACTGACATTTTCCTCTGATTATTTCCGG
GAGCGGTCGATTCATATGTAAGCTGAGTTGACCACGGAGACACCTCACTATGACTGATAAGGGACAGCTGCATAC
CACTCGTGATTGGACTCGTGGGCTTCATTATTCTGGGAAGTATTGATGTTGTCCGTAACAAAGGTGTCGCCTACT
TTGCGTGCTTCCTTCTTACCATGGGTGTAAGCCCCCATCATTGACTCTGCCACTGCTCTGACGGAAAATAAAGGC
ATTTGTGCCATCGGTCCTTGTAGCTACCTGGTAAGCGATTAGAACAAACACTTTATCTAAGGTTAACTCGTACGT
TTCTTCAGGTATTCAAATAACACTCCGCATGAATCTCGGCGTGCATTGATTGCCGGAATAATGGGTGAGAAAGGC
ATCGAAGAAAAATAATTGATGATCTTATTAACACGAATGACGCTCAGTCGCCATCGCGAATTCTGCCGGGTTAAT
TTCAACGAACGTTTTTCGAGAACAGGATGAGCCGAAATATCTGCCAGGTGTGTAAAGCAGTTCTTCGAAAAGCAG
CCATACCTATACGTAGAACAGCGCTGATAACATGTGGTACGTCCTGAGTGAGGTCCCTCCGTCTGAGAAATTCTC
ACTCGTCGGCCGAAGCTGTATCTGGGGCGATCTGTTTTATCGTCGTTGCGGGGTAAATCGGGTTCCGTCTTTGTT
TGGTTGGCATACCTAATACTCTCCATAGAATAGGTCTTTGGATGAGGCTTGATAACAGAAAAAGAAATAAGGCAC
AGGGAGTCGCCATAAGACCACAGGACGTCAAGACGGAGAACCTGGCGGCCGGACCAGAATCTCCCCTTTTCCGTT
ATATGTACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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