© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|006040 |
| Gene name | |
| Location | scaffold_1:1476683..1478162 |
| Strand | - |
| Gene length (bp) | 1479 |
| Transcript length (bp) | 1056 |
| Coding sequence length (bp) | 1056 |
| Protein length (aa) | 352 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13230 | GATase_4 | Glutamine amidotransferases class-II | 1.1E-19 | 16 | 283 |
| PF13522 | GATase_6 | Glutamine amidotransferase domain | 5.4E-09 | 88 | 162 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53871|DUG3_YEAST | Probable glutamine amidotransferase DUG3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUG3 PE=1 SV=1 | 1 | 324 | 2.0E-103 |
| sp|P54004|Y199_SYNY3 | Putative glutamine amidotransferase slr0199 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0199 PE=3 SV=1 | 1 | 283 | 1.0E-29 |
| sp|A0R5M9|EGTC_MYCS2 | Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=egtC PE=1 SV=1 | 1 | 125 | 9.0E-07 |
| sp|O69670|EGTC_MYCTU | Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=egtC PE=1 SV=1 | 1 | 125 | 6.0E-06 |
| sp|P44098|Y1037_HAEIN | Putative glutamine amidotransferase HI_1037 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1037 PE=3 SV=1 | 87 | 214 | 7.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|006040 MCRFVIYKGTSPVQLSHLLTRPCHSIINQAFDSRLRLDRRRPMNGDGFGVGWYDSVYDPELGGQPCIFTSVTPAW NNANLARLAVKIKSPLVFAHVRATTAGSLSLDNCHPFAYENLMFMHNGNIADFHLFKRRLQADLPDHLFSFVQGN TDSEWSFALFLSKVPDPNARSFSPEILRNAMLETITSLNQYAEDAGVTEPSLMNFCVTDGSSIVVSRYISSRKDE AASLWFSSGTEFNEYAEGGHYRMSKSDKRENIIMIASEPLTFERADWMEIKTNHLVVITPKMNLLQIPIEDKYFV SPSDPASLARDTDFAEEKGLLNPLTRQSKLAHDAAATAHESPFKRQVTAEH* |
| Coding | >AgabiH97|006040 ATGTGTCGATTCGTCATATATAAAGGAACTTCACCTGTACAACTCTCCCATCTTCTCACACGACCATGTCATTCT ATCATCAACCAAGCCTTTGATTCTCGACTTCGACTGGATAGACGGAGGCCAATGAATGGCGACGGATTTGGCGTT GGATGGTACGATTCGGTCTATGATCCAGAACTCGGAGGTCAACCTTGCATATTCACGTCTGTGACGCCTGCGTGG AACAATGCTAATCTAGCTCGACTAGCTGTCAAGATCAAGTCTCCCCTTGTATTTGCTCACGTTCGCGCCACCACT GCGGGATCGCTGTCCTTGGACAACTGCCACCCTTTCGCTTACGAAAACTTGATGTTTATGCACAACGGAAATATT GCAGATTTCCATCTTTTCAAACGGCGCCTCCAAGCCGACCTACCGGACCACTTATTCTCTTTCGTCCAAGGCAAT ACAGACTCCGAATGGTCGTTTGCACTTTTTCTATCCAAAGTACCTGACCCCAATGCACGGAGTTTCTCTCCAGAG ATCCTGCGCAACGCCATGCTGGAAACCATTACATCACTAAATCAGTATGCTGAAGATGCTGGAGTGACTGAACCA AGTTTGATGAATTTTTGTGTGACCGATGGGTCAAGCATCGTAGTATCGCGTTACATCTCCTCGAGAAAGGACGAG GCAGCATCCTTGTGGTTCTCTTCTGGAACAGAGTTCAACGAATACGCTGAGGGTGGCCATTACAGAATGTCAAAG TCGGACAAGCGGGAAAACATAATAATGATTGCAAGCGAACCCTTAACATTTGAGAGGGCGGACTGGATGGAGATC AAGACAAACCACTTGGTGGTAATTACACCCAAGATGAATCTATTACAGATTCCGATCGAAGACAAGTATTTTGTT TCCCCGTCAGACCCGGCTTCACTTGCTCGCGATACAGACTTTGCCGAGGAGAAGGGGTTGTTAAATCCATTGACT CGACAGAGCAAGCTGGCACACGACGCGGCCGCTACAGCGCATGAATCTCCATTCAAACGACAGGTCACTGCTGAG CATTGA |
| Transcript | >AgabiH97|006040 ATGTGTCGATTCGTCATATATAAAGGAACTTCACCTGTACAACTCTCCCATCTTCTCACACGACCATGTCATTCT ATCATCAACCAAGCCTTTGATTCTCGACTTCGACTGGATAGACGGAGGCCAATGAATGGCGACGGATTTGGCGTT GGATGGTACGATTCGGTCTATGATCCAGAACTCGGAGGTCAACCTTGCATATTCACGTCTGTGACGCCTGCGTGG AACAATGCTAATCTAGCTCGACTAGCTGTCAAGATCAAGTCTCCCCTTGTATTTGCTCACGTTCGCGCCACCACT GCGGGATCGCTGTCCTTGGACAACTGCCACCCTTTCGCTTACGAAAACTTGATGTTTATGCACAACGGAAATATT GCAGATTTCCATCTTTTCAAACGGCGCCTCCAAGCCGACCTACCGGACCACTTATTCTCTTTCGTCCAAGGCAAT ACAGACTCCGAATGGTCGTTTGCACTTTTTCTATCCAAAGTACCTGACCCCAATGCACGGAGTTTCTCTCCAGAG ATCCTGCGCAACGCCATGCTGGAAACCATTACATCACTAAATCAGTATGCTGAAGATGCTGGAGTGACTGAACCA AGTTTGATGAATTTTTGTGTGACCGATGGGTCAAGCATCGTAGTATCGCGTTACATCTCCTCGAGAAAGGACGAG GCAGCATCCTTGTGGTTCTCTTCTGGAACAGAGTTCAACGAATACGCTGAGGGTGGCCATTACAGAATGTCAAAG TCGGACAAGCGGGAAAACATAATAATGATTGCAAGCGAACCCTTAACATTTGAGAGGGCGGACTGGATGGAGATC AAGACAAACCACTTGGTGGTAATTACACCCAAGATGAATCTATTACAGATTCCGATCGAAGACAAGTATTTTGTT TCCCCGTCAGACCCGGCTTCACTTGCTCGCGATACAGACTTTGCCGAGGAGAAGGGGTTGTTAAATCCATTGACT CGACAGAGCAAGCTGGCACACGACGCGGCCGCTACAGCGCATGAATCTCCATTCAAACGACAGGTCACTGCTGAG CATTGA |
| Gene | >AgabiH97|006040 ATGTGTCGATTCGTCATATATAAAGGAACTTCACCTGTACAACTCTCCCATGTTTGTCCCTTAGAGTGTTCGTTG AGGTTAGCTGAAGTTGACAGTCGTTCTCTCCAGCTTCTCACACGACCATGTCATTCTATCATCAACCAAGCCTTT GATTCTCGACTTCGACTGGATAGACGGAGGCCAATGAATGGCGACGGATTTGGCGTTGGTTAGAGTTTGAAATTG AGGTCTGCCTTAGCCTGAATAACCTCAACAACAGGATGGTACGATTCGGTCTATGATCCAGAACTCGGAGGTCAA CCTTGCATATTCACGTCTGTGACGCCTGTGAGCTTCTTTAGACGTGGTTCATCGTCGGAAAACGTGCTCACAGAG TGACCAGGCGTGGAACAATGCTAATCTAGCTCGACTAGCTGTCAAGATCAAGTCTCCCCTTGTATTGTGCATACT CTCTCTTCTTGGGTCCTGCTTTAGTACCTTAATATCCGTACCAGTGCTCACGTTCGCGCCACCACTGCGGGATCG CTGTCCTTGGACAACTGCCACCCTTTCGCTTACGAAAACTTGATGGTACGAGTCTTTCTGCATCCATACCAGAAA AGGCGCTCATCAAAAATGGTAGTTTATGCACAACGGAAATATTGCAGATTTCCATCTTTTCAAACGGCGCCTCCA AGCCGACCTACCGGACCACTTATTCTCTTTCGTCCAAGGCAATACAGACTCCGAATGGTCGTTTGCACTTTTTCT ATCCAAAGTCTGTTGTGCAACTTGTCTCTTGTCCTTTGCTGTTACTTACACAGCATCAGGTACCTGACCCCAATG CACGGAGTTTCTCTCCAGAGATCCTGCGCAACGCCATGCTGGAAACCATTACATCACTAAATCAGTATGCTGAAG ATGCTGGAGTGACTGAACCAAGTTTGATGAATTTTTGTGTGACCGATGGGTCAAGCATCGTAGTATCGCGTTACA TCTCCTCGAGAAAGGACGAGGCAGCATCCTTGGTATCTATGATTTAATGTTATCCGCTCCATGCACTGATCATTT GTACTAGTGGTTCTCTTCTGGAACAGAGTTCAACGAATACGCTGAGGGTGGCCATTACAGAATGTCAAAGTCGGA CAAGCGGGAAAACATAATAATGATTGCAAGCGAACCCTTAACATTTGAGAGGGGTAAGCACTGGGTTTGAACGGG TTCAGCTTGGTTACTGACATAATCTGGCTAGCGGACTGGATGGAGATCAAGACAAACCACTTGGTGGTAATTACA CCCAAGATGAATCTATTACAGATTCCGATCGAAGACAAGTATTTTGTTTCCCCGTCAGACCCGGCTTCACTTGCT CGCGATACAGACTTTGCCGAGGAGAAGGGGTTGTTAAATCCATTGACTCGACAGAGCAAGCTGGCACACGACGCG GCCGCTACAGCGCATGAATCTCCATTCAAACGACAGGTCACTGCTGAGCATTGA |