© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|005860 |
| Gene name | |
| Location | scaffold_1:1437781..1439656 |
| Strand | + |
| Gene length (bp) | 1875 |
| Transcript length (bp) | 1263 |
| Coding sequence length (bp) | 1263 |
| Protein length (aa) | 421 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 1.0E-17 | 136 | 312 |
| PF16916 | ZT_dimer | Dimerisation domain of Zinc Transporter | 2.1E-11 | 344 | 403 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 113 | 417 | 3.0E-45 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 89 | 413 | 5.0E-45 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 79 | 413 | 8.0E-45 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 88 | 413 | 1.0E-40 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 116 | 412 | 5.0E-40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 113 | 417 | 3.0E-45 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 89 | 413 | 5.0E-45 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 79 | 413 | 8.0E-45 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 88 | 413 | 1.0E-40 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 116 | 412 | 5.0E-40 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 139 | 412 | 1.0E-35 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 112 | 412 | 5.0E-35 |
| sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 90 | 415 | 6.0E-27 |
| sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 92 | 415 | 8.0E-27 |
| sp|C0SP78|YDFM_BACSU | Uncharacterized transporter YdfM OS=Bacillus subtilis (strain 168) GN=ydfM PE=3 SV=1 | 136 | 403 | 5.0E-12 |
| sp|Q57891|Y449_METJA | Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0449 PE=3 SV=1 | 155 | 403 | 6.0E-09 |
| sp|Q57HF4|FIEF_SALCH | Cation-efflux pump FieF OS=Salmonella choleraesuis (strain SC-B67) GN=fieF PE=3 SV=1 | 125 | 418 | 1.0E-06 |
| sp|A8AL14|FIEF_CITK8 | Cation-efflux pump FieF OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fieF PE=3 SV=1 | 125 | 389 | 2.0E-06 |
| sp|Q8ZKR4|FIEF_SALTY | Cation-efflux pump FieF OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|C0Q413|FIEF_SALPC | Cation-efflux pump FieF OS=Salmonella paratyphi C (strain RKS4594) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|A9MZE6|FIEF_SALPB | Cation-efflux pump FieF OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|B4T048|FIEF_SALNS | Cation-efflux pump FieF OS=Salmonella newport (strain SL254) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|B4TCJ9|FIEF_SALHS | Cation-efflux pump FieF OS=Salmonella heidelberg (strain SL476) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|B5RFB0|FIEF_SALG2 | Cation-efflux pump FieF OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|B5QWZ4|FIEF_SALEP | Cation-efflux pump FieF OS=Salmonella enteritidis PT4 (strain P125109) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|B5FPR1|FIEF_SALDC | Cation-efflux pump FieF OS=Salmonella dublin (strain CT_02021853) GN=fieF PE=3 SV=1 | 143 | 418 | 5.0E-06 |
| sp|Q9ZCC5|P34_RICPR | Protein p34 OS=Rickettsia prowazekii (strain Madrid E) GN=p34 PE=3 SV=1 | 134 | 403 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0006811 | ion transport | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 131 | 153 | 22 |
| 2 | 157 | 179 | 22 |
| 3 | 200 | 222 | 22 |
| 4 | 237 | 259 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|005860 MVISHEPTPASSSSSSIASKHSPPSSPDLTVPQCHLTSRPHAVVTDHSFKFATDIERASSSGSNTWDPYEFRNGI LDDTTLSQLSRRKKGKRIARYQRRQNDLISSLLKPMEEHTEEAQSEEEAARLPVRIAVYGSLICNFALCILQMYA AVSSASLSLLATGIDSVFDIGSNVVLFWLHKKAQKLDSNKWPVGGSRLETIGNVVYGSLMGMVNLVVIVESIRTI ITKKGDALAPFHLPSIIAVAAALVVKFVLFLYSYSIRKRSSQVQVLWEDHRNDLWINAFGILMSCGGSKLVWYLD PMGGTIESIIHFLWLTRNSFPSYRLLRVSLFPGAEPFTAATFSEDIVKIDTVRAYHSGPEYFVEIDVVMDANVPL WKAHDISQQLQDKIEVLPNVERAFVHVDHETSHTPEHRKSKLIVI* |
| Coding | >AgabiH97|005860 ATGGTCATCAGCCATGAACCCACCCCTGCCTCGTCCTCGTCGTCCTCCATAGCCAGCAAGCACTCCCCTCCATCC TCTCCAGATCTCACTGTCCCCCAATGCCATTTAACGTCTAGGCCCCACGCAGTGGTAACAGATCACAGTTTTAAA TTCGCCACTGATATCGAAAGAGCATCTTCCTCCGGCTCCAATACCTGGGATCCCTACGAGTTTAGAAATGGCATC CTCGACGATACCACACTCTCTCAGCTTAGTCGCAGGAAAAAGGGCAAGCGAATCGCCAGGTACCAGCGCAGGCAG AATGATCTCATCTCTTCCCTTCTCAAACCCATGGAAGAACATACTGAAGAAGCCCAATCCGAAGAGGAAGCTGCC CGCCTCCCTGTCAGGATTGCCGTCTATGGCAGCTTAATATGCAATTTTGCCCTTTGTATTCTCCAAATGTATGCC GCCGTATCCTCCGCCTCCCTCTCCCTTTTGGCCACTGGTATCGATTCAGTTTTCGACATCGGAAGCAACGTTGTC CTCTTTTGGCTCCATAAAAAGGCTCAGAAACTCGATTCCAACAAATGGCCGGTCGGAGGCTCGCGGCTAGAGACT ATTGGAAACGTTGTATATGGCTCTCTCATGGGCATGGTTAATCTAGTCGTCATTGTCGAATCTATTAGGACTATC ATCACTAAAAAAGGCGACGCACTTGCACCCTTTCATCTACCCTCGATCATCGCAGTCGCTGCTGCTTTAGTTGTT AAATTTGTCCTATTTCTCTACTCGTATTCCATTCGAAAGAGATCTAGCCAGGTTCAAGTCCTTTGGGAGGATCAC AGAAATGACTTGTGGATCAACGCTTTTGGCATCCTCATGTCGTGCGGCGGCAGCAAGCTTGTTTGGTATCTTGAC CCCATGGGCGGTACCATCGAAAGTATCATTCATTTCCTATGGCTTACGCGGAACTCATTTCCTTCGTACAGATTG CTGCGGGTATCATTATTTCCTGGGGCAGAACCATTTACGGCGGCCACATTTAGCGAAGATATTGTAAAAATTGAT ACCGTTCGTGCCTATCATAGCGGACCGGAATATTTTGTAGAGATTGACGTGGTCATGGACGCTAATGTGCCGTTG TGGAAAGCTCATGATATCAGTCAGCAGCTTCAAGATAAGATCGAGGTGCTCCCGAACGTCGAACGTGCATTTGTA CACGTCGACCATGAAACTTCGCATACCCCAGAGCATCGGAAGTCGAAGCTGATTGTAATATGA |
| Transcript | >AgabiH97|005860 ATGGTCATCAGCCATGAACCCACCCCTGCCTCGTCCTCGTCGTCCTCCATAGCCAGCAAGCACTCCCCTCCATCC TCTCCAGATCTCACTGTCCCCCAATGCCATTTAACGTCTAGGCCCCACGCAGTGGTAACAGATCACAGTTTTAAA TTCGCCACTGATATCGAAAGAGCATCTTCCTCCGGCTCCAATACCTGGGATCCCTACGAGTTTAGAAATGGCATC CTCGACGATACCACACTCTCTCAGCTTAGTCGCAGGAAAAAGGGCAAGCGAATCGCCAGGTACCAGCGCAGGCAG AATGATCTCATCTCTTCCCTTCTCAAACCCATGGAAGAACATACTGAAGAAGCCCAATCCGAAGAGGAAGCTGCC CGCCTCCCTGTCAGGATTGCCGTCTATGGCAGCTTAATATGCAATTTTGCCCTTTGTATTCTCCAAATGTATGCC GCCGTATCCTCCGCCTCCCTCTCCCTTTTGGCCACTGGTATCGATTCAGTTTTCGACATCGGAAGCAACGTTGTC CTCTTTTGGCTCCATAAAAAGGCTCAGAAACTCGATTCCAACAAATGGCCGGTCGGAGGCTCGCGGCTAGAGACT ATTGGAAACGTTGTATATGGCTCTCTCATGGGCATGGTTAATCTAGTCGTCATTGTCGAATCTATTAGGACTATC ATCACTAAAAAAGGCGACGCACTTGCACCCTTTCATCTACCCTCGATCATCGCAGTCGCTGCTGCTTTAGTTGTT AAATTTGTCCTATTTCTCTACTCGTATTCCATTCGAAAGAGATCTAGCCAGGTTCAAGTCCTTTGGGAGGATCAC AGAAATGACTTGTGGATCAACGCTTTTGGCATCCTCATGTCGTGCGGCGGCAGCAAGCTTGTTTGGTATCTTGAC CCCATGGGCGGTACCATCGAAAGTATCATTCATTTCCTATGGCTTACGCGGAACTCATTTCCTTCGTACAGATTG CTGCGGGTATCATTATTTCCTGGGGCAGAACCATTTACGGCGGCCACATTTAGCGAAGATATTGTAAAAATTGAT ACCGTTCGTGCCTATCATAGCGGACCGGAATATTTTGTAGAGATTGACGTGGTCATGGACGCTAATGTGCCGTTG TGGAAAGCTCATGATATCAGTCAGCAGCTTCAAGATAAGATCGAGGTGCTCCCGAACGTCGAACGTGCATTTGTA CACGTCGACCATGAAACTTCGCATACCCCAGAGCATCGGAAGTCGAAGCTGATTGTAATATGA |
| Gene | >AgabiH97|005860 ATGGTCATCAGCCATGAACCCACCCCTGCCTCGTCCTCGTCGTCCTCCATAGCCAGCAAGCACTCCCCTCCATCC TCTCCAGATCTCACTGTCCCCCAATGCCATTTAACGTCTAGGCCCCACGCAGTGGTAACAGATCACAGTTTTAAA TTCGCCACTGATATCGAAAGAGCATCTTCCTCCGGCTCCAATACCTGGGATCCCTACGAGTTTAGAAATGGCATC CTCGACGATACCACACTCTCTCAGCTTAGTCGCAGGAAAAAGGGCAAGCGAATCGCCAGGTACCAGCGCAGGCAG AATGATGTCAGTTTTCGCTTTTTCCCCCTTCCGCTGTCCCTTTTTTAACTCTTTCTCAAGCTCATCTCTTCCCTT CTCAAACCCATGGAAGAACATACTGAAGAAGCCCAATCCGAAGAGGAAGCTGCCCGCCTCCCTGTAATCTTACGT TTTACCCTGTCACCGTTCCACTCTTCTAATCCTGAGCCAATCTCCCCAGGTCAGGATTGCCGTCTATGGCAGCTT AATATGCAATTTTGCCCTTTGTATTCTCCAAAGTAGATTACCCTACCTCATTGTCCTTATCATCTTCTCAATCTG CCGTTCCAGTGTATGCCGCCGTATCCTCCGCCTCCCTCTCCCTTTTGGCCACTGGTATCGATTCAGTTTTCGACA TCGGAAGCAACGTTGTCCTCTTTTGGCTCCATAAAAAGGCTCAGAAACTCGATTCCAACAAATGGCCGGTCGGAG GCTCGCGGCTAGAGACTATTGGAAACGTTGTATATGGTGAGCAGCTCACTTTCACTCCCTCTGTATTTTTGTTTT CTAAAAACAAATTGCTTCCCGACTAGGCTCTCTGTAAGTCTACTCTCGCCTCTGCACACCGGGAAAGCTACTGAT AGTTATGGCATCTCGAAGCATGGGCATGGTTAATCTAGTCGTCATTGTCGAATCTATTAGGACTATCATCACTAA AAAAGGCGACGCACTTGCACCCTTTCATCTACCCTCGATCATCGCAGTCGCTGCTGCTTTAGGTAAGTGTATCTC CCCTGTCTTCTCCCATCTATTTTGACTCGGCCATAGTTGTTAAATTTGTCCTATTTCTCTACTCGTATTCCATTC GAAAGAGATCTAGCCAGGTTCAAGTCCTTTGGGAGGATCACAGAAATGACTTGTGGATCAACGCTTTTGGTGTGT GATTCATTTATCCTCTGCTCATGGTCATCAACTGATCATACCACCCCAAGGCATCCTCATGTCGTGCGGCGGCAG CAAGCTTGTTTGGTGTGAGTGCTGAAGATCTACGATCCGTTTTTATCCCTCATGGAGCCAACAGATCTTGACCCC ATGGGCGGTACCATCGAAAGTATCATTCATTTCCTATGGCTTACGCGGAACTCATTTCCTTCGTACAGATTGCTG CGGGTATCATTATTTCCTGGGGCAGAACCATTTACGGTCAATTTGAACTCCTCGCCGGAAAATCTGCCCCGCATG ATTTCCTCCAACTCTTGATCTTCAAGGCGGCCACATTTAGCGAAGATATTGTAAAAATTGATACCGTTCGTGCCT ATCATAGCGGACCGGTGGGTTTGTATTGTTATCGACTTGATCGCGTCTAAAGGGGAGATTAGGAATATTTTGTAG AGATTGACGTGGTCATGGACGCTAATGTGCCGTTGTGGAAAGCTCATGATATCAGTCAGCAGCTTCAAGATAAGA TCGAGGTGCTCCCGAACGTCGAACGTGCATTTGTACACGTCGACCATGAAACTTCGCATACCCCAGTCCGTCTCG CTGTCTCTCCACCCATTGTACCCTCTTGACTTTGATTTACAGGAGCATCGGAAGTCGAAGCTGATTGTAATATGA |