Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|005800
Gene name
Locationscaffold_1:1423570..1424843
Strand-
Gene length (bp)1273
Transcript length (bp)1035
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05769 SIKE SIKE family 9.9E-07 14 240

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|005800
MENELHRFWLLFSDLSDQLTRNQELANSLKNQAVALKGRAEQTCSGFSLRRFNVDISQEEFDSEFERLNAQIIIE
NQTLLQENKQLSTLLKEYENTMETIMTKFRNHSVAAEQHELTLAKHYDTLVQTRESQSTAADLTVNANILHSLRR
LSHHLRLLLRSMVGEDSDSETSSSPALDLVTDPSSLSEGIEELQQLVQELSDQTDDEFDNKGRPDWTVQREWEIR
RLEEENAMLRKALEIDAENMEARGLEVDAGQIDVHRTMVIANHRAQAENSYWAGVPLETGSHTQRTPDSQFLSRL
NIQQQGQPQSPVQPTPQQSQKRATDSECPNSVVIATRFAGSACC*
Coding >AgabiH97|005800
ATGGAGAATGAATTGCATCGCTTCTGGCTGTTGTTTTCGGACCTCAGTGACCAGCTCACCCGCAACCAGGAGCTC
GCAAACTCATTGAAAAATCAAGCTGTGGCCCTCAAGGGTCGAGCGGAACAAACATGCTCAGGCTTTTCGCTGCGT
AGGTTCAATGTCGATATATCTCAAGAGGAATTTGACTCCGAATTCGAACGTCTGAACGCTCAGATCATCATCGAA
AACCAAACACTACTACAAGAGAACAAGCAGCTGAGCACTCTTCTCAAAGAATACGAAAATACCATGGAGACAATC
ATGACCAAGTTCCGGAATCACTCGGTTGCTGCTGAGCAGCACGAACTCACTCTTGCCAAACATTACGATACTCTC
GTCCAAACGCGCGAATCGCAAAGCACGGCTGCAGACCTGACAGTCAATGCCAACATACTCCACTCTCTCCGCAGA
CTTTCACATCACTTACGGTTACTTCTGCGGTCGATGGTGGGGGAGGACTCTGATTCTGAAACTTCATCTTCGCCC
GCGCTGGACCTCGTGACCGACCCCTCCTCGCTTTCGGAGGGAATTGAAGAGCTTCAGCAGCTGGTACAAGAACTT
AGTGACCAAACGGACGATGAGTTCGATAATAAGGGTAGACCGGACTGGACCGTACAGAGGGAATGGGAAATTAGG
AGACTGGAAGAAGAGAATGCGATGCTAAGGAAAGCGTTAGAAATCGATGCAGAGAACATGGAGGCGCGAGGTCTG
GAAGTTGATGCTGGACAAATTGATGTTCATCGAACAATGGTCATTGCAAACCATCGAGCACAGGCTGAAAACTCG
TATTGGGCAGGTGTACCCTTAGAGACTGGGTCGCACACGCAGCGAACGCCTGACTCGCAATTTCTATCCCGCTTG
AATATCCAACAACAGGGTCAGCCACAATCTCCAGTCCAACCAACGCCGCAACAGTCGCAGAAACGCGCAACAGAC
TCCGAGTGCCCTAACTCTGTGGTCATCGCAACCCGCTTCGCCGGCTCCGCCTGTTGTTGA
Transcript >AgabiH97|005800
ATGGAGAATGAATTGCATCGCTTCTGGCTGTTGTTTTCGGACCTCAGTGACCAGCTCACCCGCAACCAGGAGCTC
GCAAACTCATTGAAAAATCAAGCTGTGGCCCTCAAGGGTCGAGCGGAACAAACATGCTCAGGCTTTTCGCTGCGT
AGGTTCAATGTCGATATATCTCAAGAGGAATTTGACTCCGAATTCGAACGTCTGAACGCTCAGATCATCATCGAA
AACCAAACACTACTACAAGAGAACAAGCAGCTGAGCACTCTTCTCAAAGAATACGAAAATACCATGGAGACAATC
ATGACCAAGTTCCGGAATCACTCGGTTGCTGCTGAGCAGCACGAACTCACTCTTGCCAAACATTACGATACTCTC
GTCCAAACGCGCGAATCGCAAAGCACGGCTGCAGACCTGACAGTCAATGCCAACATACTCCACTCTCTCCGCAGA
CTTTCACATCACTTACGGTTACTTCTGCGGTCGATGGTGGGGGAGGACTCTGATTCTGAAACTTCATCTTCGCCC
GCGCTGGACCTCGTGACCGACCCCTCCTCGCTTTCGGAGGGAATTGAAGAGCTTCAGCAGCTGGTACAAGAACTT
AGTGACCAAACGGACGATGAGTTCGATAATAAGGGTAGACCGGACTGGACCGTACAGAGGGAATGGGAAATTAGG
AGACTGGAAGAAGAGAATGCGATGCTAAGGAAAGCGTTAGAAATCGATGCAGAGAACATGGAGGCGCGAGGTCTG
GAAGTTGATGCTGGACAAATTGATGTTCATCGAACAATGGTCATTGCAAACCATCGAGCACAGGCTGAAAACTCG
TATTGGGCAGGTGTACCCTTAGAGACTGGGTCGCACACGCAGCGAACGCCTGACTCGCAATTTCTATCCCGCTTG
AATATCCAACAACAGGGTCAGCCACAATCTCCAGTCCAACCAACGCCGCAACAGTCGCAGAAACGCGCAACAGAC
TCCGAGTGCCCTAACTCTGTGGTCATCGCAACCCGCTTCGCCGGCTCCGCCTGTTGTTGA
Gene >AgabiH97|005800
ATGGAGAATGAATTGCATCGCTTCTGGCTGTTGTTTTCGGACCTCAGTGACCAGCTCACCCGCAACCAGGAGCTC
GCAAACTCATTGAAAAATCAAGCTGTGGCCCTCAAGGTTAGCGCTTCAACCATTTCGGAAAGGAATGTCTGAGAA
TATGCCCTCCGCAGGGTCGAGCGGAACAAACATGCTCAGGCTTTTCGCTGCGTAGGTTCAATGTCGATATATCTC
AAGGTTTTTCACCTTTGTATTCAGCCGCATTGTCAAAACTGATACAAGGATTTAGAGGAATTTGACTCCGAATTC
GAACGTCTGAACGCTCAGATCATCATCGAAAACCAAACACTACTACAAGAGAACAAGCAGCTGAGCACTCTTCTC
AAAGAATACGAAAATACCATGGAGACAATCATGACCAAGTTCCGGAATCACTCGGTGAGTTCTTGGTTTAACTTT
TCGGTGTGTCTTATCTAGAACAATCCACACAGGTTGCTGCTGAGCAGCACGAACTCACTCTTGCCAAACATTACG
ATACTCTCGTCCAAACGCGCGAATCGCAAAGCACGGCTGCAGACCTGACAGTCAATGCCAACATACTCCACTCTC
TCCGCAGACTTTCACATCACTTACGGTTACTTCTGCGGTCGATGGTGGGGGAGGACTCTGATTCTGAAACTTCAT
CTTCGCCCGCGCTGGACCTCGTGACCGACCCCTCCTCGCTTTCGGAGGGAATTGAAGAGCTTCAGCAGCTGGTAC
AAGAACTTAGTGACCAAACGGACGATGAGTTCGATAATAAGGGTAGACCGGACTGGACCGTACAGAGGGAATGGG
AAATTAGGAGACTGGAAGAAGAGAATGCGATGCTAAGGAAAGCGTTAGAAATCGATGCAGAGAACATGGAGGCGC
GAGGTCTGGAAGTTGATGCTGGACAAATTGATGTTCATCGAACAATGGTCATTGCAAACCATCGAGCACAGGCTG
AAAACTCGTATTGGGCAGGTGTACCCTTAGAGACTGGGTCGCACACGCAGCGAACGCCTGACTCGCAATTTCTAT
CCCGCTTGAATATCCAACAACAGGGTCAGCCACAATCTCCAGTCCAACCAACGCCGCAACAGTCGCAGAAACGCG
CAACAGGTGTGTGGGGTACATCTACTTTGCCTGATCGAAGAGAGCGTAACAATGGGGCTGGACGACCACTGACAT
TTACGGGACAGACTCCGAGTGCCCTAACTCTGTGGTCATCGCAACCCGCTTCGCCGGCTCCGCCTGTTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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