Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|005800
Gene name
Location	scaffold_1:1423570..1424843
Strand	-
Gene length (bp)	1273
Transcript length (bp)	1035
Coding sequence length (bp)	1035
Protein length (aa)	345

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05769	SIKE	SIKE family	9.9E-07	14	240

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|005800 MENELHRFWLLFSDLSDQLTRNQELANSLKNQAVALKGRAEQTCSGFSLRRFNVDISQEEFDSEFERLNAQIIIE NQTLLQENKQLSTLLKEYENTMETIMTKFRNHSVAAEQHELTLAKHYDTLVQTRESQSTAADLTVNANILHSLRR LSHHLRLLLRSMVGEDSDSETSSSPALDLVTDPSSLSEGIEELQQLVQELSDQTDDEFDNKGRPDWTVQREWEIR RLEEENAMLRKALEIDAENMEARGLEVDAGQIDVHRTMVIANHRAQAENSYWAGVPLETGSHTQRTPDSQFLSRL NIQQQGQPQSPVQPTPQQSQKRATDSECPNSVVIATRFAGSACC*
Coding	>AgabiH97\|005800 ATGGAGAATGAATTGCATCGCTTCTGGCTGTTGTTTTCGGACCTCAGTGACCAGCTCACCCGCAACCAGGAGCTC GCAAACTCATTGAAAAATCAAGCTGTGGCCCTCAAGGGTCGAGCGGAACAAACATGCTCAGGCTTTTCGCTGCGT AGGTTCAATGTCGATATATCTCAAGAGGAATTTGACTCCGAATTCGAACGTCTGAACGCTCAGATCATCATCGAA AACCAAACACTACTACAAGAGAACAAGCAGCTGAGCACTCTTCTCAAAGAATACGAAAATACCATGGAGACAATC ATGACCAAGTTCCGGAATCACTCGGTTGCTGCTGAGCAGCACGAACTCACTCTTGCCAAACATTACGATACTCTC GTCCAAACGCGCGAATCGCAAAGCACGGCTGCAGACCTGACAGTCAATGCCAACATACTCCACTCTCTCCGCAGA CTTTCACATCACTTACGGTTACTTCTGCGGTCGATGGTGGGGGAGGACTCTGATTCTGAAACTTCATCTTCGCCC GCGCTGGACCTCGTGACCGACCCCTCCTCGCTTTCGGAGGGAATTGAAGAGCTTCAGCAGCTGGTACAAGAACTT AGTGACCAAACGGACGATGAGTTCGATAATAAGGGTAGACCGGACTGGACCGTACAGAGGGAATGGGAAATTAGG AGACTGGAAGAAGAGAATGCGATGCTAAGGAAAGCGTTAGAAATCGATGCAGAGAACATGGAGGCGCGAGGTCTG GAAGTTGATGCTGGACAAATTGATGTTCATCGAACAATGGTCATTGCAAACCATCGAGCACAGGCTGAAAACTCG TATTGGGCAGGTGTACCCTTAGAGACTGGGTCGCACACGCAGCGAACGCCTGACTCGCAATTTCTATCCCGCTTG AATATCCAACAACAGGGTCAGCCACAATCTCCAGTCCAACCAACGCCGCAACAGTCGCAGAAACGCGCAACAGAC TCCGAGTGCCCTAACTCTGTGGTCATCGCAACCCGCTTCGCCGGCTCCGCCTGTTGTTGA
Transcript	>AgabiH97\|005800 ATGGAGAATGAATTGCATCGCTTCTGGCTGTTGTTTTCGGACCTCAGTGACCAGCTCACCCGCAACCAGGAGCTC GCAAACTCATTGAAAAATCAAGCTGTGGCCCTCAAGGGTCGAGCGGAACAAACATGCTCAGGCTTTTCGCTGCGT AGGTTCAATGTCGATATATCTCAAGAGGAATTTGACTCCGAATTCGAACGTCTGAACGCTCAGATCATCATCGAA AACCAAACACTACTACAAGAGAACAAGCAGCTGAGCACTCTTCTCAAAGAATACGAAAATACCATGGAGACAATC ATGACCAAGTTCCGGAATCACTCGGTTGCTGCTGAGCAGCACGAACTCACTCTTGCCAAACATTACGATACTCTC GTCCAAACGCGCGAATCGCAAAGCACGGCTGCAGACCTGACAGTCAATGCCAACATACTCCACTCTCTCCGCAGA CTTTCACATCACTTACGGTTACTTCTGCGGTCGATGGTGGGGGAGGACTCTGATTCTGAAACTTCATCTTCGCCC GCGCTGGACCTCGTGACCGACCCCTCCTCGCTTTCGGAGGGAATTGAAGAGCTTCAGCAGCTGGTACAAGAACTT AGTGACCAAACGGACGATGAGTTCGATAATAAGGGTAGACCGGACTGGACCGTACAGAGGGAATGGGAAATTAGG AGACTGGAAGAAGAGAATGCGATGCTAAGGAAAGCGTTAGAAATCGATGCAGAGAACATGGAGGCGCGAGGTCTG GAAGTTGATGCTGGACAAATTGATGTTCATCGAACAATGGTCATTGCAAACCATCGAGCACAGGCTGAAAACTCG TATTGGGCAGGTGTACCCTTAGAGACTGGGTCGCACACGCAGCGAACGCCTGACTCGCAATTTCTATCCCGCTTG AATATCCAACAACAGGGTCAGCCACAATCTCCAGTCCAACCAACGCCGCAACAGTCGCAGAAACGCGCAACAGAC TCCGAGTGCCCTAACTCTGTGGTCATCGCAACCCGCTTCGCCGGCTCCGCCTGTTGTTGA
Gene	>AgabiH97\|005800 ATGGAGAATGAATTGCATCGCTTCTGGCTGTTGTTTTCGGACCTCAGTGACCAGCTCACCCGCAACCAGGAGCTC GCAAACTCATTGAAAAATCAAGCTGTGGCCCTCAAGGTTAGCGCTTCAACCATTTCGGAAAGGAATGTCTGAGAA TATGCCCTCCGCAGGGTCGAGCGGAACAAACATGCTCAGGCTTTTCGCTGCGTAGGTTCAATGTCGATATATCTC AAGGTTTTTCACCTTTGTATTCAGCCGCATTGTCAAAACTGATACAAGGATTTAGAGGAATTTGACTCCGAATTC GAACGTCTGAACGCTCAGATCATCATCGAAAACCAAACACTACTACAAGAGAACAAGCAGCTGAGCACTCTTCTC AAAGAATACGAAAATACCATGGAGACAATCATGACCAAGTTCCGGAATCACTCGGTGAGTTCTTGGTTTAACTTT TCGGTGTGTCTTATCTAGAACAATCCACACAGGTTGCTGCTGAGCAGCACGAACTCACTCTTGCCAAACATTACG ATACTCTCGTCCAAACGCGCGAATCGCAAAGCACGGCTGCAGACCTGACAGTCAATGCCAACATACTCCACTCTC TCCGCAGACTTTCACATCACTTACGGTTACTTCTGCGGTCGATGGTGGGGGAGGACTCTGATTCTGAAACTTCAT CTTCGCCCGCGCTGGACCTCGTGACCGACCCCTCCTCGCTTTCGGAGGGAATTGAAGAGCTTCAGCAGCTGGTAC AAGAACTTAGTGACCAAACGGACGATGAGTTCGATAATAAGGGTAGACCGGACTGGACCGTACAGAGGGAATGGG AAATTAGGAGACTGGAAGAAGAGAATGCGATGCTAAGGAAAGCGTTAGAAATCGATGCAGAGAACATGGAGGCGC GAGGTCTGGAAGTTGATGCTGGACAAATTGATGTTCATCGAACAATGGTCATTGCAAACCATCGAGCACAGGCTG AAAACTCGTATTGGGCAGGTGTACCCTTAGAGACTGGGTCGCACACGCAGCGAACGCCTGACTCGCAATTTCTAT CCCGCTTGAATATCCAACAACAGGGTCAGCCACAATCTCCAGTCCAACCAACGCCGCAACAGTCGCAGAAACGCG CAACAGGTGTGTGGGGTACATCTACTTTGCCTGATCGAAGAGAGCGTAACAATGGGGCTGGACGACCACTGACAT TTACGGGACAGACTCCGAGTGCCCTAACTCTGTGGTCATCGCAACCCGCTTCGCCGGCTCCGCCTGTTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail