© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|004470 |
| Gene name | |
| Location | scaffold_1:1097949..1099892 |
| Strand | + |
| Gene length (bp) | 1943 |
| Transcript length (bp) | 1098 |
| Coding sequence length (bp) | 1098 |
| Protein length (aa) | 366 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00445 | Ribonuclease_T2 | Ribonuclease T2 family | 6.6E-44 | 64 | 237 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P81296|RNL2_LENED | Ribonuclease Le2 OS=Lentinula edodes PE=1 SV=1 | 35 | 270 | 2.0E-106 |
| sp|P24657|RNTR_HYPRU | Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 | 36 | 270 | 4.0E-85 |
| sp|P10281|RNT2_ASPOR | Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 | 39 | 277 | 3.0E-79 |
| sp|P19791|RNM_ASPPH | Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 | 39 | 272 | 6.0E-75 |
| sp|Q5B3K6|RNY1_EMENI | Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 | 46 | 314 | 4.0E-70 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P81296|RNL2_LENED | Ribonuclease Le2 OS=Lentinula edodes PE=1 SV=1 | 35 | 270 | 2.0E-106 |
| sp|P24657|RNTR_HYPRU | Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 | 36 | 270 | 4.0E-85 |
| sp|P10281|RNT2_ASPOR | Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 | 39 | 277 | 3.0E-79 |
| sp|P19791|RNM_ASPPH | Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 | 39 | 272 | 6.0E-75 |
| sp|Q5B3K6|RNY1_EMENI | Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 | 46 | 314 | 4.0E-70 |
| sp|Q4WXZ5|RNY1_ASPFU | Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 | 18 | 314 | 2.0E-68 |
| sp|Q5AK94|RNY1A_CANAL | Ribonuclease T2-like 1-A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-A PE=3 SV=1 | 31 | 273 | 2.0E-66 |
| sp|Q6CAV7|RNY1_YARLI | Ribonuclease T2-like OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RNY1 PE=3 SV=1 | 39 | 273 | 1.0E-61 |
| sp|Q5AKB1|RNY1B_CANAL | Ribonuclease T2-like 1-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-B PE=3 SV=1 | 44 | 314 | 5.0E-60 |
| sp|Q6BHB1|RNY1_DEBHA | Ribonuclease T2-like OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RNY1 PE=3 SV=2 | 6 | 314 | 2.0E-53 |
| sp|Q6CRT6|RNY1_KLULA | Ribonuclease T2-like OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RNY1 PE=3 SV=1 | 39 | 317 | 4.0E-50 |
| sp|Q6FP42|RNY1_CANGA | Ribonuclease T2-like OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RNY1 PE=3 SV=1 | 36 | 317 | 1.0E-48 |
| sp|Q02933|RNY1_YEAST | Ribonuclease T2-like OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNY1 PE=1 SV=1 | 30 | 269 | 5.0E-45 |
| sp|Q75BW5|RNY1_ASHGO | Ribonuclease T2-like OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RNY1 PE=3 SV=1 | 39 | 271 | 1.0E-41 |
| sp|P08056|RNRH_RHINI | Ribonuclease Rh OS=Rhizopus niveus PE=1 SV=1 | 19 | 269 | 7.0E-35 |
| sp|P42813|RNS1_ARATH | Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1 | 76 | 226 | 2.0E-15 |
| sp|P80022|RNLE_SOLLC | Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2 | 76 | 226 | 3.0E-14 |
| sp|O00584|RNT2_HUMAN | Ribonuclease T2 OS=Homo sapiens GN=RNASET2 PE=1 SV=2 | 80 | 225 | 5.0E-13 |
| sp|P80196|RNLX_SOLLC | Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2 | 76 | 229 | 2.0E-12 |
| sp|Q7M329|RNT2_PIG | Ribonuclease T2 OS=Sus scrofa GN=RNASET2 PE=1 SV=1 | 80 | 225 | 4.0E-12 |
| sp|P81477|PHYB_PHYPO | Ribonuclease Phyb OS=Physarum polycephalum PE=1 SV=1 | 84 | 233 | 4.0E-12 |
| sp|P42815|RNS3_ARATH | Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1 | 76 | 267 | 6.0E-12 |
| sp|Q9CQ01|RNT2_MOUSE | Ribonuclease T2 OS=Mus musculus GN=Rnaset2 PE=1 SV=1 | 66 | 225 | 3.0E-11 |
| sp|P42814|RNS2_ARATH | Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1 | 83 | 240 | 5.0E-11 |
| sp|Q7M438|RNDI_DICDI | Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3 | 82 | 234 | 4.0E-10 |
| sp|Q01796|RNS2_SOLTU | Ribonuclease S-2 OS=Solanum tuberosum PE=2 SV=1 | 80 | 236 | 6.0E-09 |
| sp|Q40381|RNS7_NICAL | Ribonuclease S-7 OS=Nicotiana alata PE=1 SV=1 | 65 | 234 | 5.0E-07 |
| sp|O80322|RNS1_PYRPY | Ribonuclease S-1 OS=Pyrus pyrifolia PE=1 SV=1 | 76 | 229 | 6.0E-07 |
| sp|P23540|RNMC_MOMCH | Ribonuclease MC OS=Momordica charantia PE=1 SV=1 | 76 | 235 | 2.0E-06 |
| sp|P83618|RN28_PANGI | Ribonuclease-like storage protein OS=Panax ginseng PE=1 SV=2 | 81 | 228 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003723 | RNA binding | Yes |
| GO:0033897 | ribonuclease T2 activity | Yes |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0004518 | nuclease activity | No |
| GO:0140098 | catalytic activity, acting on RNA | No |
| GO:0004521 | endoribonuclease activity | No |
| GO:0004519 | endonuclease activity | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0003676 | nucleic acid binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0016787 | hydrolase activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0016849 | phosphorus-oxygen lyase activity | No |
| GO:0004540 | ribonuclease activity | No |
| GO:0005488 | binding | No |
| GO:0016829 | lyase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|004470 MRSAIVLGVLVSAAAAIALRSPVGRTSLLGRSASISSGCSTSGPTSCHNTSPVSDTCCFESPGGLLLQTQFWDTD PSTGPIDSWTIHGLWPDKCDGTFDQNCDPSRAYTGISSLLTSQGASDTLSFMNTHWVDINGQNERFWEHEWETHG TCMSTLETSCLPSGSPRGAEAVAFFETVVRLFKTLPTYDWLSDAGITPSTSRTFSRSTLSSALENVAGVTPSLGC NGNTLNAISWYYNLKGSIIDGEFIPINAIESGSCPSSGIRYPPKSGSGTPTSTLPPGPTGNPGSLPTKATIHAIH SGSDLGGLLSLGTWGLRLEWRYVQVREWSVLDHLFCEIVGWVLTSGIWRLNQLFKRRHPERNNGV* |
| Coding | >AgabiH97|004470 ATGCGTAGCGCCATTGTTTTGGGTGTTTTGGTCTCTGCCGCTGCAGCGATTGCTCTGCGATCTCCCGTAGGAAGG ACCAGTCTTCTTGGCAGGAGCGCGAGCATTTCCTCTGGTTGTTCAACGAGTGGGCCTACTTCTTGCCATAACACT TCACCGGTCTCGGACACTTGTTGTTTTGAAAGTCCAGGGGGTCTCTTGCTTCAAACCCAGTTTTGGGATACAGAT CCGTCCACCGGGCCAATTGATAGCTGGACAATACATGGATTGTGGCCCGACAAGTGTGATGGAACCTTTGACCAG AATTGCGATCCCTCGCGTGCTTACACGGGAATAAGTTCATTGTTGACTTCTCAGGGAGCGAGCGATACGTTGTCA TTTATGAACACACATTGGGTTGATATTAACGGACAAAATGAACGATTCTGGGAGCATGAGTGGGAAACGCACGGA ACTTGTATGAGCACTTTGGAGACTTCTTGTTTGCCAAGCGGAAGCCCGAGAGGTGCAGAGGCAGTTGCCTTCTTC GAAACTGTTGTCAGATTATTCAAAACATTGCCAACCTACGACTGGCTGTCAGATGCAGGGATCACTCCCAGCACA TCCAGAACCTTCAGTCGATCAACCCTGTCCTCGGCACTCGAAAATGTGGCAGGCGTAACGCCGTCATTGGGTTGT AACGGAAATACACTAAACGCCATATCCTGGTATTATAACTTGAAGGGTTCAATAATCGATGGCGAGTTCATTCCA ATTAATGCTATCGAGAGCGGATCGTGCCCTTCGTCGGGCATCAGGTATCCACCCAAGTCTGGTTCCGGAACCCCA ACATCCACTCTTCCCCCAGGTCCGACAGGGAATCCAGGATCTCTCCCAACAAAGGCAACCATACATGCCATTCAT TCGGGGTCTGATTTGGGCGGGCTTCTTTCCCTTGGGACGTGGGGACTGCGGCTTGAGTGGAGGTATGTTCAAGTG CGAGAGTGGAGTGTCCTCGACCACCTTTTCTGCGAAATCGTCGGATGGGTCCTTACTTCTGGCATCTGGAGGCTC AACCAGCTTTTCAAGCGACGGCATCCCGAGCGGAACAACGGTGTTTGA |
| Transcript | >AgabiH97|004470 ATGCGTAGCGCCATTGTTTTGGGTGTTTTGGTCTCTGCCGCTGCAGCGATTGCTCTGCGATCTCCCGTAGGAAGG ACCAGTCTTCTTGGCAGGAGCGCGAGCATTTCCTCTGGTTGTTCAACGAGTGGGCCTACTTCTTGCCATAACACT TCACCGGTCTCGGACACTTGTTGTTTTGAAAGTCCAGGGGGTCTCTTGCTTCAAACCCAGTTTTGGGATACAGAT CCGTCCACCGGGCCAATTGATAGCTGGACAATACATGGATTGTGGCCCGACAAGTGTGATGGAACCTTTGACCAG AATTGCGATCCCTCGCGTGCTTACACGGGAATAAGTTCATTGTTGACTTCTCAGGGAGCGAGCGATACGTTGTCA TTTATGAACACACATTGGGTTGATATTAACGGACAAAATGAACGATTCTGGGAGCATGAGTGGGAAACGCACGGA ACTTGTATGAGCACTTTGGAGACTTCTTGTTTGCCAAGCGGAAGCCCGAGAGGTGCAGAGGCAGTTGCCTTCTTC GAAACTGTTGTCAGATTATTCAAAACATTGCCAACCTACGACTGGCTGTCAGATGCAGGGATCACTCCCAGCACA TCCAGAACCTTCAGTCGATCAACCCTGTCCTCGGCACTCGAAAATGTGGCAGGCGTAACGCCGTCATTGGGTTGT AACGGAAATACACTAAACGCCATATCCTGGTATTATAACTTGAAGGGTTCAATAATCGATGGCGAGTTCATTCCA ATTAATGCTATCGAGAGCGGATCGTGCCCTTCGTCGGGCATCAGGTATCCACCCAAGTCTGGTTCCGGAACCCCA ACATCCACTCTTCCCCCAGGTCCGACAGGGAATCCAGGATCTCTCCCAACAAAGGCAACCATACATGCCATTCAT TCGGGGTCTGATTTGGGCGGGCTTCTTTCCCTTGGGACGTGGGGACTGCGGCTTGAGTGGAGGTATGTTCAAGTG CGAGAGTGGAGTGTCCTCGACCACCTTTTCTGCGAAATCGTCGGATGGGTCCTTACTTCTGGCATCTGGAGGCTC AACCAGCTTTTCAAGCGACGGCATCCCGAGCGGAACAACGGTGTTTGA |
| Gene | >AgabiH97|004470 ATGCGTAGCGCCATTGTTTTGGGTGTTTTGGTCTCTGCCGCTGCAGCGATTGCTCTGCGATCTCCCGTAGGAAGG ACCAGTCTTCTTGGCAGGAGCGCGAGCATTTCCTCTGGTTGTTCAACGAGTGGGCCTACTTCTTGCCATAACACT TCACCGGTCTCGGACACTTGTTGTTTTGAAAGTCCAGGGGTATGCATCTCCGAGTCGTCTTTGCCCTCAAATTAC AAAAGGAATTAAAATCCGGTTTATTAGGGTCTCTTGCTTCAAACCCAGGTGCATTCATCAGTTTAAAATCTTTTT AGATTCGTATAACTGAGGGAAGAAATTTGTGGGGGATAGTTTTGGGATACAGATCCGTCCACCGGGCCAATTGAT AGCTGGACAATACATGGTGAGCCTAATTGATAGCCTCCACTATAGATTTTGTGACGTTATGCCAGGATTGTGGCC CGACAAGTGAGCATCGCTCTAAAAGCACATGGCGGAAGCACTCACATGTATACACATTTCTTAAGGTGTGATGGA ACCTTTGACCAGAATTGCGATCCCTCGCGTGCTTACACGGGAATAAGTTCAGTAAGTACCATGTCGTCTGGCTTT TCCAGGTTCAATCGGGTTAATCTTGTGCTGCTGTAGTTGTTGACTTCTCAGGGAGCGAGCGATACGTTGTCATTT ATGAACACAGTGTGTCCCTATACCATCCTCCTTTTCTGAACCAGGATTCATTTTCTATAGCATTGGGTTGATATT AACGGACAAAATGAACGATTCTGGGAGGTCCGTCGTTTGATTGTAGTCACCGTAATGAAAAGCTGAATGGCAGAA CAGCATGAGTGGGAAACGCACGGAACTTGTATGAGCACTTTGGAGACTTCTTGTTTGCCAAGCGGAAGCCCGAGA GGTGCAGAGGTATGATTTACGTTCCTGGTATACCAACAAGTCACCATTGGAGATTTAGGCAGTTGCCTTCTTCGA AACTGTTGTCAGATTATTCAAAGTCAGGTCACCAAAAGAGAAACTTTGGGATTGTATTCACTGACCGATACGCAG ACATTGCCAACCTACGACTGGCTGTCAGATGCAGGGATCACTCCCAGCACATCCAGAACCTTCAGTCGATCAACC CTGTCCTCGGCACTCGAAAATGTGGCAGGCGTAACGCCGTCATTGGGTTGTAACGGAAATACACTAAACGCCATA TCCTGGTATTATAACTTGAAGGGTTCAATAATCGATGGCGAGTTCATTCCAATTAGTACGTTGACAATGGAATGA AGAAGGCAGTATACTGAATCTTCCATAGATGCTATCGAGAGCGGATCGTGCCCTTCGTCGGGCATCAGGTATCCA CCCAAGTCTGGTTCCGGAACCCCAACATCCGTAAGTTCGAGACCTCAGTTGACGTGAAATAAGACTCACCTACAT GAATTAGACTCTTCCCGTAAGCTGAATTGCACATAGGTCAATTGCGATTACTCACAAAAGAAATCCGGAACGAGC AGCCAGGTCCGACAGGGGTGAGCGGGAAAAAACTCTGAATTGAAATGAGCAACTATTGACTGGAGGTTCTTCCAG AATCCAGGATCTCTCCCAACAAAGGCAACCATACATGCCATTCATTCGGGGTCTGATTTGGGCGGGCTTCTTTCC CTTGGGACGTGGTCAACACAGACCTTGGCGACTTTCACGATTTCCGGATCAGCTGATAGCTTCACGATGAAATCG TCTAAAGGGGACTGCGGCTTGAGTGGAGGTATGTTCAAGTGCGAGAGTGGAGTGTCCTCGACCACCTTTTCTGCG GTAAGTGTCAGTCTGACAGTTGTGAATTTAAATCGACGGGGTTATCCACCACAGAAATCGTCGGATGGGTCCTTA CTTCTGGCATCTGGAGGCTCAACCAGCTTTTCAAGCGACGGCATCCCGAGCGGAACAACGGTGTTTGA |