Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|004160
Gene name
Locationscaffold_1:1027189..1028949
Strand-
Gene length (bp)1760
Transcript length (bp)1500
Coding sequence length (bp)1500
Protein length (aa) 500

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|004160
MRHSVGRFIWFCVLTSFLAYYAIDAEHPISSHASKIDTEIRWRATYLSTGGQVNYRRPELKLPESLDTTAVILNW
SRLPNVVQLVKIMCNSLQGTFAQIFVWNNNPQPLNFEDFAEALCPRHILRIHNSPDNVYFQARFLACAQATTRYC
FIQDDDYFIQTPIIRAMRARIAESRHGAIFLLPAHEMLYSTLSTIKAGPSVQALFAWLGYGVMVESSQIQDFLSL
LRTINATEDVLRMADNYFTILSNRLPELWFDQNYELGGGTPFTVGTVGEERNKRHIVDAGSMLDSLVNMLTHNSA
DNIPYISFPTPPSSAVDATTRAACISFPCMVETNIKLLPELLNDTVSSASELVLHAANRLDALSDDSKRRYVEFS
PSSAVDANPATSFQSFGDAMEGDWIALDWMIADFEDKDLELALLIDPSTEAIMSNSRLESSVDSKHWHKVTGGAS
CAMVEGGVLLECGFALDRAPSRKVRVWLEREVACGWAVHEMWLREKWSG*
Coding >AgabiH97|004160
ATGCGCCATTCCGTCGGAAGATTTATTTGGTTTTGTGTCTTGACCTCTTTCCTTGCCTACTATGCCATCGACGCG
GAACATCCTATTTCCTCTCATGCATCAAAGATCGACACCGAAATCCGTTGGAGGGCAACTTATTTATCTACGGGT
GGCCAAGTCAACTATCGCAGACCTGAATTAAAGCTTCCAGAGTCACTGGACACAACGGCTGTGATACTTAACTGG
TCTCGTCTGCCGAATGTGGTCCAGCTGGTCAAGATCATGTGCAATTCTCTTCAAGGCACATTTGCGCAAATCTTC
GTCTGGAACAATAATCCTCAGCCATTGAATTTCGAAGATTTTGCAGAGGCCCTGTGTCCAAGACACATATTGAGG
ATCCACAACTCGCCCGACAATGTTTATTTTCAGGCTCGTTTTCTTGCCTGTGCACAGGCAACTACTCGATATTGT
TTTATACAGGACGATGACTATTTTATCCAAACACCGATTATTCGTGCTATGCGGGCAAGGATAGCAGAATCACGT
CACGGCGCGATATTCTTGCTTCCGGCACATGAGATGCTCTACTCGACACTCAGTACCATCAAGGCCGGTCCGTCC
GTCCAGGCACTATTTGCTTGGCTTGGTTATGGTGTTATGGTGGAAAGTTCCCAGATCCAGGATTTCCTGAGTCTT
CTTCGCACCATAAACGCTACAGAAGATGTCCTGAGAATGGCAGATAACTATTTCACGATTCTATCCAACAGATTG
CCTGAACTTTGGTTTGATCAGAATTACGAGCTTGGAGGAGGAACGCCGTTTACTGTTGGAACCGTCGGTGAGGAA
CGCAACAAACGACATATTGTAGATGCAGGTTCCATGCTCGATTCTCTTGTTAACATGCTCACCCATAATTCTGCG
GACAACATTCCTTACATTTCCTTTCCGACACCGCCCTCTTCGGCCGTAGATGCGACTACACGAGCTGCTTGCATT
TCATTCCCTTGTATGGTCGAAACCAATATCAAGCTTCTACCGGAACTGCTCAACGATACAGTATCTTCTGCCTCT
GAGTTGGTTCTGCATGCTGCCAACCGACTTGACGCGTTGAGCGACGACAGTAAAAGGCGTTATGTTGAGTTTTCA
CCTTCGTCTGCCGTTGATGCCAATCCGGCAACGAGTTTTCAGAGTTTCGGCGATGCCATGGAGGGAGACTGGATT
GCTTTGGACTGGATGATAGCCGATTTTGAAGACAAGGACCTTGAGCTCGCGTTATTAATTGATCCATCCACCGAG
GCTATCATGAGCAACAGTCGCCTAGAGAGTTCTGTGGATAGCAAACATTGGCACAAGGTAACAGGTGGGGCGTCG
TGTGCTATGGTCGAAGGCGGTGTGTTGCTGGAGTGCGGATTTGCGCTAGACAGGGCCCCGTCGAGAAAGGTACGT
GTGTGGCTCGAGAGGGAGGTTGCATGTGGATGGGCTGTTCATGAGATGTGGCTGCGGGAGAAATGGTCGGGGTAA
Transcript >AgabiH97|004160
ATGCGCCATTCCGTCGGAAGATTTATTTGGTTTTGTGTCTTGACCTCTTTCCTTGCCTACTATGCCATCGACGCG
GAACATCCTATTTCCTCTCATGCATCAAAGATCGACACCGAAATCCGTTGGAGGGCAACTTATTTATCTACGGGT
GGCCAAGTCAACTATCGCAGACCTGAATTAAAGCTTCCAGAGTCACTGGACACAACGGCTGTGATACTTAACTGG
TCTCGTCTGCCGAATGTGGTCCAGCTGGTCAAGATCATGTGCAATTCTCTTCAAGGCACATTTGCGCAAATCTTC
GTCTGGAACAATAATCCTCAGCCATTGAATTTCGAAGATTTTGCAGAGGCCCTGTGTCCAAGACACATATTGAGG
ATCCACAACTCGCCCGACAATGTTTATTTTCAGGCTCGTTTTCTTGCCTGTGCACAGGCAACTACTCGATATTGT
TTTATACAGGACGATGACTATTTTATCCAAACACCGATTATTCGTGCTATGCGGGCAAGGATAGCAGAATCACGT
CACGGCGCGATATTCTTGCTTCCGGCACATGAGATGCTCTACTCGACACTCAGTACCATCAAGGCCGGTCCGTCC
GTCCAGGCACTATTTGCTTGGCTTGGTTATGGTGTTATGGTGGAAAGTTCCCAGATCCAGGATTTCCTGAGTCTT
CTTCGCACCATAAACGCTACAGAAGATGTCCTGAGAATGGCAGATAACTATTTCACGATTCTATCCAACAGATTG
CCTGAACTTTGGTTTGATCAGAATTACGAGCTTGGAGGAGGAACGCCGTTTACTGTTGGAACCGTCGGTGAGGAA
CGCAACAAACGACATATTGTAGATGCAGGTTCCATGCTCGATTCTCTTGTTAACATGCTCACCCATAATTCTGCG
GACAACATTCCTTACATTTCCTTTCCGACACCGCCCTCTTCGGCCGTAGATGCGACTACACGAGCTGCTTGCATT
TCATTCCCTTGTATGGTCGAAACCAATATCAAGCTTCTACCGGAACTGCTCAACGATACAGTATCTTCTGCCTCT
GAGTTGGTTCTGCATGCTGCCAACCGACTTGACGCGTTGAGCGACGACAGTAAAAGGCGTTATGTTGAGTTTTCA
CCTTCGTCTGCCGTTGATGCCAATCCGGCAACGAGTTTTCAGAGTTTCGGCGATGCCATGGAGGGAGACTGGATT
GCTTTGGACTGGATGATAGCCGATTTTGAAGACAAGGACCTTGAGCTCGCGTTATTAATTGATCCATCCACCGAG
GCTATCATGAGCAACAGTCGCCTAGAGAGTTCTGTGGATAGCAAACATTGGCACAAGGTAACAGGTGGGGCGTCG
TGTGCTATGGTCGAAGGCGGTGTGTTGCTGGAGTGCGGATTTGCGCTAGACAGGGCCCCGTCGAGAAAGGTACGT
GTGTGGCTCGAGAGGGAGGTTGCATGTGGATGGGCTGTTCATGAGATGTGGCTGCGGGAGAAATGGTCGGGGTAA
Gene >AgabiH97|004160
ATGCGCCATTCCGTCGGAAGATTTATTTGGTTTTGTGTCTTGACCTCTTTCCTTGCCTACTATGCCATCGACGCG
GAACATCCTATTTCCTCTCATGCATCAAAGATCGACACCGAAATCCGTTGGAGGGCAACTTATTTATCTACGGGT
GGCCAAGTCAACTATCGCAGACCTGAATTAAAGCTTCCAGAGTCACTGGACACAACGGCTGTGATACTTAACTGG
TCTCGTCTGCCGAATGTGGTCCAGCTGGTCAAGATCATGTGCAATTCTCTTCAAGGCACATTTGCGCAAATCTTC
GTCTGGAACAATAATCCTCAGCCATTGAATTTCGAAGTTGGTTTGGGGAACCTATTCAAGATATCTTATCATCAT
CTCACATGGGCTAGGATTTTGCAGAGGCCCTGTGTCCAAGACACATATTGAGGATCCACAACTCGCCCGACAATG
TTTATTTTCAGGCTCGTTTTCTTGCCTGTGCACAGGCAACTACTCGATATTGTTTTATACAGGTCAAATCTACAC
TCCTTCTTAAAGCAGCCATTCACTCGTTCTTTAGGACGATGACTATTTTATCCAAACACCGATTATTCGTGCTAT
GCGGGCAAGGATAGCAGAATCACGTCACGGCGCGATATTCTTGCTTCCGGCACATGAGATGCTCTACTCGACACT
CAGTACCATCAAGGCCGGTCCGTCCGTCCAGGCACTATTTGCTTGGCTTGGTTATGGTGTTATGGTGGAAAGTTC
CCAGATCCAGGATTTCCTGAGTCTTCTTCGCACCATAAACGCTACAGAAGATGTCCTGAGAATGGCAGATAACTA
TTTCACGATTCTATCCAACAGATTGCCTGAACTTTGGTTTGATCAGAATTACGAGCTTGGAGGAGGAACGCCGTT
TACTGTTGGAACCGTCGGTGAGGAACGCAACAAACGACATATTGTGAGATCCAGCAATATGTACAGTATTCATGC
CCTGACTATTTGACAAGGTAGATGCAGGTTCCATGCTCGATTCTCTTGTTAACATGCTCACCCATAATTCTGCGG
ACAACATTCCTTACATTTCCTTTCCGACACCGCCCTCTTCGGCCGTAGATGCGACTACACGAGCTGCTTGCATTT
CATTCCCTTGTATGGTCGAAACCAATATCAAGCTTCTACCGGAACTGCTCAACGATACAGTATCTTCTGCCTCTG
AGTTGGTTCTGCATGCTGCCAACCGACTTGACGCGTTGAGCGACGACAGTAAAAGGCGTTATGTTGAGTTTTCAC
CTTCGTCTGCCGTTGATGCCAATCCGGCAACGAGTTTTCAGAGTTTCGGCGGTGAGGCATATTTGACAGACGCCG
AGTCCGGGAAGGGTTACTGAGCGATGTCTAGATGCCATGGAGGGAGACTGGATTGCTTTGGACTGGATGATAGCC
GATTTTGAAGACAAGGACCTTGAGCTCGCGTTATTAATTGATCCATCCACCGAGGCTATCATGAGCAACAGTCGC
CTAGAGAGTTCTGTGGATAGCAAACATTGGGTAAGTTTAACATACATGGGTTCCGGCAGACGCCTAATGACCCGT
CATTGGTGCAGCACAAGGTAACAGGTGGGGCGTCGTGTGCTATGGTCGAAGGCGGTGTGTTGCTGGAGTGCGGAT
TTGCGCTAGACAGGGCCCCGTCGAGAAAGGTACGTGTGTGGCTCGAGAGGGAGGTTGCATGTGGATGGGCTGTTC
ATGAGATGTGGCTGCGGGAGAAATGGTCGGGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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