Protein ID | AgabiH97|000320 |
Gene name | |
Location | scaffold_1:74547..76202 |
Strand | - |
Gene length (bp) | 1655 |
Transcript length (bp) | 1341 |
Coding sequence length (bp) | 1341 |
Protein length (aa) | 447 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01207 | Dus | Dihydrouridine synthase (Dus) | 1.3E-68 | 24 | 273 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P53759|DUS1_YEAST | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS1 PE=1 SV=1 | 6 | 393 | 2.0E-110 |
sp|Q6P1R4|DUS1L_HUMAN | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens GN=DUS1L PE=1 SV=1 | 7 | 424 | 5.0E-108 |
sp|Q8K582|DUS1L_RAT | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus GN=Dus1l PE=2 SV=1 | 7 | 401 | 7.0E-108 |
sp|Q8C2P3|DUS1L_MOUSE | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus GN=Dus1l PE=2 SV=1 | 7 | 401 | 4.0E-107 |
sp|Q9HGN6|DUS1_SCHPO | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus1 PE=3 SV=1 | 3 | 393 | 9.0E-106 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P53759|DUS1_YEAST | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS1 PE=1 SV=1 | 6 | 393 | 2.0E-110 |
sp|Q6P1R4|DUS1L_HUMAN | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens GN=DUS1L PE=1 SV=1 | 7 | 424 | 5.0E-108 |
sp|Q8K582|DUS1L_RAT | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus GN=Dus1l PE=2 SV=1 | 7 | 401 | 7.0E-108 |
sp|Q8C2P3|DUS1L_MOUSE | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus GN=Dus1l PE=2 SV=1 | 7 | 401 | 4.0E-107 |
sp|Q9HGN6|DUS1_SCHPO | tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus1 PE=3 SV=1 | 3 | 393 | 9.0E-106 |
sp|O95620|DUS4L_HUMAN | tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS4L PE=2 SV=2 | 24 | 255 | 3.0E-36 |
sp|O74553|DUS4_SCHPO | tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus4 PE=3 SV=1 | 21 | 255 | 2.0E-35 |
sp|Q32M08|DUS4L_MOUSE | tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus4l PE=2 SV=1 | 24 | 255 | 4.0E-35 |
sp|Q09504|YQI2_CAEEL | Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 OS=Caenorhabditis elegans GN=C45G9.2 PE=3 SV=2 | 28 | 279 | 9.0E-33 |
sp|Q06063|DUS4_YEAST | tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS4 PE=1 SV=1 | 19 | 258 | 1.0E-32 |
sp|Q9NX74|DUS2L_HUMAN | tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS2 PE=1 SV=1 | 22 | 283 | 9.0E-31 |
sp|Q9D7B1|DUS2L_MOUSE | tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus2 PE=1 SV=1 | 22 | 253 | 1.0E-30 |
sp|Q4UNJ4|DUS_RICFE | Probable tRNA-dihydrouridine synthase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=dus PE=3 SV=1 | 7 | 279 | 1.0E-29 |
sp|Q9ZED2|DUS_RICPR | Probable tRNA-dihydrouridine synthase OS=Rickettsia prowazekii (strain Madrid E) GN=dus PE=3 SV=2 | 7 | 279 | 1.0E-28 |
sp|P41504|DUS_RHILP | Probable tRNA-dihydrouridine synthase OS=Rhizobium leguminosarum bv. phaseoli GN=dus PE=3 SV=1 | 22 | 325 | 3.0E-28 |
sp|Q92JQ6|DUS_RICCN | Probable tRNA-dihydrouridine synthase OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=dus PE=3 SV=2 | 16 | 279 | 4.0E-28 |
sp|P45672|DUS_AZOBR | Probable tRNA-dihydrouridine synthase OS=Azospirillum brasilense GN=dus PE=3 SV=1 | 24 | 279 | 1.0E-27 |
sp|Q1RH84|DUS_RICBR | Probable tRNA-dihydrouridine synthase OS=Rickettsia bellii (strain RML369-C) GN=dus PE=3 SV=1 | 16 | 279 | 2.0E-27 |
sp|Q68XZ3|DUS_RICTY | Probable tRNA-dihydrouridine synthase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=dus PE=3 SV=1 | 7 | 279 | 2.0E-27 |
sp|Q9CLW3|DUSB_PASMU | tRNA-dihydrouridine synthase B OS=Pasteurella multocida (strain Pm70) GN=dusB PE=3 SV=2 | 7 | 259 | 2.0E-26 |
sp|Q7VNP2|DUSB_HAEDU | tRNA-dihydrouridine synthase B OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) GN=dusB PE=3 SV=1 | 20 | 279 | 2.0E-24 |
sp|P44965|DUSB_HAEIN | tRNA-dihydrouridine synthase B OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=dusB PE=3 SV=1 | 7 | 259 | 2.0E-24 |
sp|Q55724|DUS1_SYNY3 | Probable tRNA-dihydrouridine synthase 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dus1 PE=3 SV=1 | 7 | 252 | 5.0E-24 |
sp|Q9HUW1|DUSB_PSEAE | tRNA-dihydrouridine synthase B OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=dusB PE=3 SV=1 | 22 | 254 | 8.0E-24 |
sp|Q8ZAX7|DUSB_YERPE | tRNA-dihydrouridine synthase B OS=Yersinia pestis GN=dusB PE=3 SV=1 | 24 | 264 | 1.0E-23 |
sp|P37567|DUS1_BACSU | Probable tRNA-dihydrouridine synthase 1 OS=Bacillus subtilis (strain 168) GN=dus1 PE=3 SV=1 | 22 | 254 | 7.0E-23 |
sp|O52539|DUSB_PECCA | tRNA-dihydrouridine synthase B OS=Pectobacterium carotovorum GN=dusB PE=3 SV=2 | 22 | 253 | 1.0E-22 |
sp|Q88DK5|DUSB_PSEPK | tRNA-dihydrouridine synthase B OS=Pseudomonas putida (strain KT2440) GN=dusB PE=3 SV=1 | 7 | 279 | 1.0E-22 |
sp|Q8PCH1|DUSB_XANCP | tRNA-dihydrouridine synthase B OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=dusB PE=3 SV=1 | 20 | 279 | 5.0E-22 |
sp|Q8PP72|DUSB_XANAC | tRNA-dihydrouridine synthase B OS=Xanthomonas axonopodis pv. citri (strain 306) GN=dusB PE=3 SV=1 | 20 | 279 | 7.0E-22 |
sp|O52533|DUSB_PROVU | tRNA-dihydrouridine synthase B OS=Proteus vulgaris GN=dusB PE=3 SV=2 | 7 | 264 | 3.0E-21 |
sp|Q87KU1|DUSB_VIBPA | tRNA-dihydrouridine synthase B OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusB PE=3 SV=2 | 7 | 254 | 3.0E-21 |
sp|Q87VS1|DUSB_PSESM | tRNA-dihydrouridine synthase B OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=dusB PE=3 SV=1 | 24 | 279 | 5.0E-21 |
sp|P0A2R6|DUSB_SALTY | tRNA-dihydrouridine synthase B OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=dusB PE=3 SV=1 | 22 | 264 | 1.0E-20 |
sp|P0A2R7|DUSB_SALTI | tRNA-dihydrouridine synthase B OS=Salmonella typhi GN=dusB PE=3 SV=1 | 22 | 264 | 1.0E-20 |
sp|O52536|DUSB_KLEPN | tRNA-dihydrouridine synthase B OS=Klebsiella pneumoniae GN=dusB PE=3 SV=1 | 7 | 264 | 5.0E-20 |
sp|P0ABT5|DUSB_ECOLI | tRNA-dihydrouridine synthase B OS=Escherichia coli (strain K12) GN=dusB PE=3 SV=1 | 7 | 264 | 7.0E-20 |
sp|P0ABT6|DUSB_ECOL6 | tRNA-dihydrouridine synthase B OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dusB PE=3 SV=1 | 7 | 264 | 7.0E-20 |
sp|P0ABT7|DUSB_ECO57 | tRNA-dihydrouridine synthase B OS=Escherichia coli O157:H7 GN=dusB PE=3 SV=1 | 7 | 264 | 7.0E-20 |
sp|Q8EJR8|DUSB_SHEON | tRNA-dihydrouridine synthase B OS=Shewanella oneidensis (strain MR-1) GN=dusB PE=3 SV=1 | 22 | 297 | 2.0E-19 |
sp|Q83PZ5|DUSB_SHIFL | tRNA-dihydrouridine synthase B OS=Shigella flexneri GN=dusB PE=3 SV=1 | 7 | 264 | 9.0E-19 |
sp|Q3KRC5|DUS3L_RAT | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Rattus norvegicus GN=Dus3l PE=2 SV=1 | 20 | 253 | 1.0E-18 |
sp|P44606|DUSC_HAEIN | tRNA-dihydrouridine(16) synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=dusC PE=3 SV=1 | 71 | 264 | 1.0E-18 |
sp|O67533|DUS_AQUAE | Probable tRNA-dihydrouridine synthase OS=Aquifex aeolicus (strain VF5) GN=dus PE=3 SV=1 | 24 | 253 | 1.0E-18 |
sp|Q8CWL2|DUSB_VIBVU | tRNA-dihydrouridine synthase B OS=Vibrio vulnificus (strain CMCP6) GN=dusB PE=3 SV=2 | 7 | 263 | 2.0E-18 |
sp|O52532|DUSB_SERMA | tRNA-dihydrouridine synthase B OS=Serratia marcescens GN=dusB PE=3 SV=2 | 24 | 264 | 3.0E-18 |
sp|Q91XI1|DUS3L_MOUSE | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Mus musculus GN=Dus3l PE=1 SV=1 | 20 | 253 | 3.0E-18 |
sp|P0CN29|DUS3_CRYNB | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=DUS3 PE=3 SV=1 | 25 | 253 | 4.0E-18 |
sp|P0CN28|DUS3_CRYNJ | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=DUS3 PE=3 SV=1 | 25 | 253 | 4.0E-18 |
sp|Q28BT8|DUS3L_XENTR | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus tropicalis GN=dus3l PE=2 SV=2 | 22 | 253 | 5.0E-18 |
sp|Q54CU9|DUS3L_DICDI | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Dictyostelium discoideum GN=dus3l PE=3 SV=1 | 24 | 253 | 8.0E-18 |
sp|Q7ZWS1|DUS3L_XENLA | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Xenopus laevis GN=dus3l PE=2 SV=1 | 22 | 253 | 9.0E-18 |
sp|A8NZY7|DUS3_COPC7 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=DUS3 PE=3 SV=1 | 22 | 253 | 9.0E-18 |
sp|Q96G46|DUS3L_HUMAN | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Homo sapiens GN=DUS3L PE=1 SV=2 | 22 | 253 | 1.0E-17 |
sp|Q9KV66|DUSB_VIBCH | tRNA-dihydrouridine synthase B OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=dusB PE=3 SV=2 | 7 | 279 | 1.0E-17 |
sp|O74731|DUS2_SCHPO | tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus2 PE=3 SV=1 | 20 | 253 | 2.0E-17 |
sp|Q9AMN9|DUSC_PSEAC | tRNA-dihydrouridine(16) synthase OS=Pseudomonas alcaligenes GN=dusC PE=3 SV=1 | 86 | 277 | 2.0E-17 |
sp|Q8XYX1|DUSC_RALSO | tRNA-dihydrouridine(16) synthase OS=Ralstonia solanacearum (strain GMI1000) GN=dusC PE=3 SV=1 | 86 | 269 | 8.0E-17 |
sp|P9WNS7|DUS_MYCTU | Probable tRNA-dihydrouridine synthase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=dus PE=1 SV=1 | 18 | 279 | 1.0E-16 |
sp|P9WNS6|DUS_MYCTO | Probable tRNA-dihydrouridine synthase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=dus PE=3 SV=1 | 18 | 279 | 1.0E-16 |
sp|Q87N01|DUSC_VIBPA | tRNA-dihydrouridine(16) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusC PE=3 SV=1 | 71 | 262 | 1.0E-16 |
sp|A8PTG4|DUS3_MALGO | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) GN=DUS3 PE=3 SV=1 | 25 | 253 | 4.0E-16 |
sp|Q9JZL5|DUSC_NEIMB | tRNA-dihydrouridine(16) synthase OS=Neisseria meningitidis serogroup B (strain MC58) GN=dusC PE=3 SV=1 | 86 | 269 | 5.0E-16 |
sp|Q08111|DUS_RHOCB | Probable tRNA-dihydrouridine synthase OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=dus PE=3 SV=1 | 21 | 250 | 7.0E-16 |
sp|Q9JUP6|DUSC_NEIMA | tRNA-dihydrouridine(16) synthase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=dusC PE=3 SV=1 | 86 | 269 | 1.0E-15 |
sp|Q1E2F4|DUS3_COCIM | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coccidioides immitis (strain RS) GN=DUS3 PE=3 SV=1 | 15 | 253 | 2.0E-15 |
sp|Q8XEC6|DUSC_ECO57 | tRNA-dihydrouridine(16) synthase OS=Escherichia coli O157:H7 GN=dusC PE=3 SV=1 | 89 | 252 | 3.0E-15 |
sp|Q8FFV5|DUSC_ECOL6 | tRNA-dihydrouridine(16) synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dusC PE=3 SV=2 | 89 | 252 | 5.0E-15 |
sp|Q8ZNM4|DUSC_SALTY | tRNA-dihydrouridine(16) synthase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=dusC PE=3 SV=1 | 86 | 252 | 6.0E-15 |
sp|P33371|DUSC_ECOLI | tRNA-dihydrouridine(16) synthase OS=Escherichia coli (strain K12) GN=dusC PE=1 SV=1 | 89 | 252 | 7.0E-15 |
sp|A7EKL8|DUS3_SCLS1 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dus3 PE=3 SV=1 | 15 | 254 | 7.0E-15 |
sp|Q8ZGV2|DUSC_YERPE | tRNA-dihydrouridine(16) synthase OS=Yersinia pestis GN=dusC PE=3 SV=2 | 89 | 252 | 8.0E-15 |
sp|Q7UC91|DUSC_SHIFL | tRNA-dihydrouridine(16) synthase OS=Shigella flexneri GN=dusC PE=3 SV=1 | 89 | 252 | 8.0E-15 |
sp|O68273|DUSC_CUPNH | tRNA-dihydrouridine(16) synthase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dusC PE=3 SV=2 | 86 | 269 | 8.0E-15 |
sp|Q50049|DUS_MYCLE | Probable tRNA-dihydrouridine synthase OS=Mycobacterium leprae (strain TN) GN=dus PE=3 SV=1 | 24 | 279 | 3.0E-14 |
sp|Q88LF2|DUSC_PSEPK | tRNA-dihydrouridine(16) synthase OS=Pseudomonas putida (strain KT2440) GN=dusC PE=3 SV=1 | 86 | 276 | 3.0E-14 |
sp|Q8Z5B2|DUSC_SALTI | tRNA-dihydrouridine(16) synthase OS=Salmonella typhi GN=dusC PE=3 SV=1 | 86 | 252 | 3.0E-14 |
sp|A6RMI1|DUS3_BOTFB | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Botryotinia fuckeliana (strain B05.10) GN=dus3 PE=3 SV=1 | 15 | 254 | 5.0E-14 |
sp|Q9CJW1|DUSC_PASMU | tRNA-dihydrouridine(16) synthase OS=Pasteurella multocida (strain Pm70) GN=dusC PE=3 SV=1 | 77 | 252 | 5.0E-14 |
sp|Q4P1U2|DUS3_USTMA | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Ustilago maydis (strain 521 / FGSC 9021) GN=DUS3 PE=3 SV=1 | 25 | 253 | 5.0E-14 |
sp|Q9KT00|DUSC_VIBCH | tRNA-dihydrouridine(16) synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=dusC PE=3 SV=1 | 86 | 252 | 1.0E-13 |
sp|Q8DAH1|DUSC_VIBVU | tRNA-dihydrouridine(16) synthase OS=Vibrio vulnificus (strain CMCP6) GN=dusC PE=3 SV=2 | 86 | 252 | 2.0E-13 |
sp|P72872|DUSAL_SYNY3 | tRNA-dihydrouridine(20/20a) synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dus2 PE=3 SV=1 | 25 | 188 | 6.0E-13 |
sp|A6QYC6|DUS3_AJECN | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=DUS3 PE=3 SV=1 | 24 | 253 | 7.0E-13 |
sp|Q7VKU5|DUSC_HAEDU | tRNA-dihydrouridine(16) synthase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) GN=dusC PE=3 SV=1 | 78 | 252 | 7.0E-13 |
sp|Q0CZL3|DUS3_ASPTN | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dus3 PE=3 SV=1 | 15 | 253 | 1.0E-12 |
sp|Q9HZ95|DUSC_PSEAE | tRNA-dihydrouridine(16) synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=dusC PE=3 SV=1 | 86 | 252 | 1.0E-12 |
sp|Q9CL29|DUSA_PASMU | tRNA-dihydrouridine(20/20a) synthase OS=Pasteurella multocida (strain Pm70) GN=dusA PE=3 SV=1 | 13 | 188 | 2.0E-12 |
sp|Q7SG01|DUS3_NEUCR | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dus-3 PE=3 SV=1 | 15 | 258 | 4.0E-12 |
sp|Q8EFG7|DUSC_SHEON | tRNA-dihydrouridine(16) synthase OS=Shewanella oneidensis (strain MR-1) GN=dusC PE=3 SV=1 | 86 | 262 | 7.0E-12 |
sp|Q5SMC7|DUSAL_THET8 | tRNA-dihydrouridine(20/20a) synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dus PE=1 SV=1 | 21 | 188 | 1.0E-11 |
sp|O25427|DUS_HELPY | Probable tRNA-dihydrouridine synthase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=dus PE=3 SV=1 | 24 | 327 | 2.0E-11 |
sp|Q884C6|DUSC_PSESM | tRNA-dihydrouridine(16) synthase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=dusC PE=3 SV=1 | 86 | 252 | 2.0E-11 |
sp|P44794|DUSA_HAEIN | tRNA-dihydrouridine(20/20a) synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=dusA PE=3 SV=1 | 13 | 253 | 2.0E-11 |
sp|A5DBS1|DUS3_PICGU | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=DUS3 PE=3 SV=2 | 24 | 253 | 3.0E-11 |
sp|A3LUK5|DUS3_PICST | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=DUS3 PE=3 SV=1 | 24 | 253 | 4.0E-11 |
sp|Q2HDP2|DUS3_CHAGB | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DUS3 PE=3 SV=2 | 15 | 253 | 7.0E-11 |
sp|A1CNY3|DUS3_ASPCL | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dus3 PE=3 SV=1 | 15 | 253 | 8.0E-11 |
sp|Q9ZLB6|DUS_HELPJ | Probable tRNA-dihydrouridine synthase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=dus PE=3 SV=1 | 24 | 279 | 8.0E-11 |
sp|Q9KUX9|DUSA_VIBCH | tRNA-dihydrouridine(20/20a) synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=dusA PE=3 SV=1 | 20 | 188 | 9.0E-11 |
sp|Q5ALL3|DUS3_CANAL | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DUS3 PE=3 SV=1 | 24 | 253 | 1.0E-10 |
sp|Q7VNV2|DUSA_HAEDU | tRNA-dihydrouridine(20/20a) synthase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) GN=dusA PE=3 SV=1 | 13 | 253 | 1.0E-10 |
sp|A4RLF4|DUS3_MAGO7 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DUS3 PE=3 SV=1 | 15 | 258 | 2.0E-10 |
sp|Q8P3X4|DUSA_XANCP | tRNA-dihydrouridine(20/20a) synthase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=dusA PE=3 SV=1 | 20 | 265 | 3.0E-10 |
sp|Q8ZJ14|DUSA_YERPE | tRNA-dihydrouridine(20/20a) synthase OS=Yersinia pestis GN=dusA PE=3 SV=1 | 22 | 253 | 5.0E-10 |
sp|A5DTS1|DUS3_LODEL | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=DUS3 PE=3 SV=1 | 24 | 253 | 7.0E-10 |
sp|Q4WRX4|DUS3_ASPFU | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dus3 PE=3 SV=1 | 15 | 253 | 2.0E-09 |
sp|Q0U9D6|DUS3_PHANO | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=DUS3 PE=3 SV=2 | 24 | 253 | 2.0E-09 |
sp|Q2UL89|DUS3_ASPOR | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=dus3 PE=3 SV=1 | 15 | 253 | 2.0E-09 |
sp|Q6BS64|DUS3_DEBHA | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DUS3 PE=3 SV=1 | 24 | 253 | 2.0E-09 |
sp|Q5BF62|DUS3_EMENI | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dus3 PE=3 SV=1 | 15 | 254 | 6.0E-09 |
sp|P53720|DUS2_YEAST | tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMM1 PE=1 SV=1 | 22 | 253 | 6.0E-09 |
sp|Q8NYV4|DUS_STAAW | Probable tRNA-dihydrouridine synthase OS=Staphylococcus aureus (strain MW2) GN=dus PE=3 SV=1 | 18 | 253 | 1.0E-08 |
sp|Q6GD38|DUS_STAAS | Probable tRNA-dihydrouridine synthase OS=Staphylococcus aureus (strain MSSA476) GN=dus PE=3 SV=1 | 18 | 253 | 1.0E-08 |
sp|Q5HJT5|DUS_STAAC | Probable tRNA-dihydrouridine synthase OS=Staphylococcus aureus (strain COL) GN=dus PE=3 SV=2 | 18 | 253 | 1.0E-08 |
sp|P67717|DUS_STAAN | Probable tRNA-dihydrouridine synthase OS=Staphylococcus aureus (strain N315) GN=dus PE=1 SV=1 | 18 | 253 | 1.0E-08 |
sp|P67716|DUS_STAAM | Probable tRNA-dihydrouridine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dus PE=3 SV=1 | 18 | 253 | 1.0E-08 |
sp|Q6GKK9|DUS_STAAR | Probable tRNA-dihydrouridine synthase OS=Staphylococcus aureus (strain MRSA252) GN=dus PE=3 SV=1 | 14 | 253 | 1.0E-08 |
sp|A2QAU6|DUS3_ASPNC | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dus3 PE=3 SV=1 | 15 | 253 | 1.0E-08 |
sp|O83945|DUS_TREPA | Probable tRNA-dihydrouridine synthase OS=Treponema pallidum (strain Nichols) GN=dus PE=3 SV=1 | 24 | 261 | 1.0E-08 |
sp|Q8EAJ0|DUSA_SHEON | tRNA-dihydrouridine(20/20a) synthase OS=Shewanella oneidensis (strain MR-1) GN=dusA PE=3 SV=1 | 23 | 161 | 2.0E-08 |
sp|Q757E3|DUS3_ASHGO | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DUS3 PE=3 SV=1 | 22 | 253 | 2.0E-08 |
sp|Q8ZKH4|DUSA_SALTY | tRNA-dihydrouridine(20/20a) synthase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=dusA PE=3 SV=1 | 16 | 161 | 2.0E-08 |
sp|A1D1U0|DUS3_NEOFI | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dus3 PE=3 SV=1 | 15 | 253 | 2.0E-08 |
sp|Q8Z1T1|DUSA_SALTI | tRNA-dihydrouridine(20/20a) synthase OS=Salmonella typhi GN=dusA PE=3 SV=1 | 16 | 161 | 2.0E-08 |
sp|Q6CWM0|DUS3_KLULA | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DUS3 PE=3 SV=1 | 22 | 253 | 6.0E-08 |
sp|P32695|DUSA_ECOLI | tRNA-dihydrouridine(20/20a) synthase OS=Escherichia coli (strain K12) GN=dusA PE=1 SV=4 | 16 | 161 | 1.0E-07 |
sp|Q8X5V6|DUSA_ECO57 | tRNA-dihydrouridine(20/20a) synthase OS=Escherichia coli O157:H7 GN=dusA PE=3 SV=3 | 16 | 161 | 1.0E-07 |
sp|Q7UBC5|DUSA_SHIFL | tRNA-dihydrouridine(20/20a) synthase OS=Shigella flexneri GN=dusA PE=3 SV=3 | 16 | 161 | 1.0E-07 |
sp|Q88KX0|DUSA_PSEPK | tRNA-dihydrouridine(20/20a) synthase OS=Pseudomonas putida (strain KT2440) GN=dusA PE=3 SV=1 | 20 | 196 | 1.0E-07 |
sp|Q8PFF8|DUSA_XANAC | tRNA-dihydrouridine(20/20a) synthase OS=Xanthomonas axonopodis pv. citri (strain 306) GN=dusA PE=3 SV=1 | 19 | 258 | 3.0E-07 |
sp|Q06053|DUS3_YEAST | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS3 PE=1 SV=2 | 22 | 258 | 4.0E-07 |
sp|A7A1S5|DUS3_YEAS7 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain YJM789) GN=DUS3 PE=3 SV=1 | 22 | 258 | 4.0E-07 |
sp|Q8FB30|DUSA_ECOL6 | tRNA-dihydrouridine(20/20a) synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dusA PE=3 SV=1 | 22 | 161 | 4.0E-07 |
sp|Q5HKD5|DUS_STAEQ | Probable tRNA-dihydrouridine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dus PE=3 SV=1 | 14 | 253 | 8.0E-07 |
sp|Q9I048|DUSA_PSEAE | tRNA-dihydrouridine(20/20a) synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=dusA PE=3 SV=1 | 20 | 278 | 9.0E-07 |
sp|Q87L85|DUSA_VIBPA | tRNA-dihydrouridine(20/20a) synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=dusA PE=3 SV=1 | 20 | 188 | 1.0E-06 |
sp|Q8CU07|DUS_STAES | Probable tRNA-dihydrouridine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dus PE=3 SV=1 | 14 | 253 | 1.0E-06 |
sp|Q8CWK7|DUSA_VIBVU | tRNA-dihydrouridine(20/20a) synthase OS=Vibrio vulnificus (strain CMCP6) GN=dusA PE=3 SV=2 | 20 | 188 | 2.0E-06 |
sp|Q9HL35|PYRDB_THEAC | Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=pyrD PE=3 SV=1 | 85 | 183 | 9.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.353 | 0.7991 | 0.0987 | 0.0311 | 0.2148 | 0.0009 | 0.0316 | 0.0413 | 0.0266 | 0.0025 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 44.36 | 25.84 | 62.88 |
Initials | Initials knots | 36.95 | 21.46 | 52.45 |
Pileal_Stipeal_center | Stage I stipe center | 44.83 | 26.17 | 63.48 |
Pileal_Stipeal_shell | Stage I stipe shell | 50.47 | 29.24 | 71.71 |
DIF_stipe_center | Stage II stipe center | 49.43 | 29.30 | 69.55 |
DIF_stipe_shell | Stage II stipe shell | 40.54 | 23.56 | 57.53 |
DIF_stipe_skin | Stage II stipe skin | 39.65 | 23.03 | 56.28 |
DIF_cap_skin | Stage II cap skin | 51.68 | 30.59 | 72.78 |
DIF_cap_tissue | Stage II cap tissue | 61.57 | 36.63 | 86.50 |
DIF_gill_tissue | Stage II gill tissue | 62.98 | 37.47 | 88.49 |
YFB_stipe_center | Young fruiting body stipe center | 47.43 | 28.08 | 66.79 |
YFB_stipe_shell | Young fruiting body stipe shell | 44.04 | 25.95 | 62.13 |
YFB_stipe_skin | Young fruiting body stipe skin | 36.67 | 21.33 | 52.02 |
YFB_cap_skin | Young fruiting body cap skin | 39.00 | 22.78 | 55.22 |
YFB_cap_tissue | Young fruiting body cap tissue | 48.00 | 28.44 | 67.56 |
YFB_gill_tissue | Young fruiting body gill tissue | 39.72 | 22.80 | 56.63 |
YFB_veil | Young fruiting body veil | 49.14 | 29.15 | 69.14 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.271064 | no |
Casing | YFB_stipe_center | 0.896904 | no |
Casing | YFB_stipe_shell | 0.989150 | no |
Casing | YFB_stipe_skin | 0.629878 | no |
Casing | YFB_cap_skin | 0.776327 | no |
Casing | YFB_cap_tissue | 0.875835 | no |
Casing | YFB_gill_tissue | 0.819449 | no |
Casing | YFB_veil | 0.830197 | no |
Casing | Initials | 0.647355 | no |
Casing | Pileal_Stipeal_center | 0.985598 | no |
Casing | Pileal_Stipeal_shell | 0.773791 | no |
Casing | DIF_stipe_center | 0.821391 | no |
Casing | DIF_stipe_shell | 0.857647 | no |
Casing | DIF_stipe_skin | 0.814191 | no |
Casing | DIF_cap_skin | 0.714893 | no |
Casing | DIF_cap_tissue | 0.312684 | no |
DIF_gill_tissue | YFB_stipe_center | 0.392277 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.240509 | no |
DIF_gill_tissue | YFB_stipe_skin | 0.044418 | yes |
DIF_gill_tissue | YFB_cap_skin | 0.086585 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.419706 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.109622 | no |
DIF_gill_tissue | YFB_veil | 0.476917 | no |
YFB_stipe_center | YFB_stipe_shell | 0.880340 | no |
YFB_stipe_center | YFB_stipe_skin | 0.454633 | no |
YFB_stipe_center | YFB_cap_skin | 0.610015 | no |
YFB_stipe_center | YFB_cap_tissue | 0.982217 | no |
YFB_stipe_center | YFB_gill_tissue | 0.660176 | no |
YFB_stipe_center | YFB_veil | 0.949040 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.642028 | no |
YFB_stipe_shell | YFB_cap_skin | 0.789034 | no |
YFB_stipe_shell | YFB_cap_tissue | 0.858524 | no |
YFB_stipe_shell | YFB_gill_tissue | 0.830158 | no |
YFB_stipe_shell | YFB_veil | 0.810350 | no |
YFB_stipe_skin | YFB_cap_skin | 0.909839 | no |
YFB_stipe_skin | YFB_cap_tissue | 0.429259 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.875855 | no |
YFB_stipe_skin | YFB_veil | 0.374329 | no |
YFB_cap_skin | YFB_cap_tissue | 0.578865 | no |
YFB_cap_skin | YFB_gill_tissue | 0.974427 | no |
YFB_cap_skin | YFB_veil | 0.523257 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.633120 | no |
YFB_cap_tissue | YFB_veil | 0.966776 | no |
YFB_gill_tissue | YFB_veil | 0.571041 | no |
Initials | DIF_gill_tissue | 0.050294 | no |
Initials | YFB_stipe_center | 0.472318 | no |
Initials | YFB_stipe_shell | 0.662490 | no |
Initials | YFB_stipe_skin | 0.989627 | no |
Initials | YFB_cap_skin | 0.921998 | no |
Initials | YFB_cap_tissue | 0.445917 | no |
Initials | YFB_gill_tissue | 0.888157 | no |
Initials | YFB_veil | 0.391490 | no |
Initials | Pileal_Stipeal_center | 0.618860 | no |
Initials | Pileal_Stipeal_shell | 0.337682 | no |
Initials | DIF_stipe_center | 0.387685 | no |
Initials | DIF_stipe_shell | 0.848533 | no |
Initials | DIF_stipe_skin | 0.890764 | no |
Initials | DIF_cap_skin | 0.283169 | no |
Initials | DIF_cap_tissue | 0.061844 | no |
Pileal_Stipeal_center | DIF_gill_tissue | 0.289477 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.915040 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.974203 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.605922 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.754627 | no |
Pileal_Stipeal_center | YFB_cap_tissue | 0.893765 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.795675 | no |
Pileal_Stipeal_center | YFB_veil | 0.851105 | no |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.796897 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.841706 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.835968 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.790558 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.741277 | no |
Pileal_Stipeal_center | DIF_cap_tissue | 0.331182 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.544796 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.906344 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.758983 | no |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.325777 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.465177 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.926263 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.515541 | no |
Pileal_Stipeal_shell | YFB_veil | 0.963050 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.970918 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.558645 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.509833 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.965068 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.605439 | no |
DIF_stipe_center | DIF_gill_tissue | 0.489311 | no |
DIF_stipe_center | YFB_stipe_center | 0.940437 | no |
DIF_stipe_center | YFB_stipe_shell | 0.801138 | no |
DIF_stipe_center | YFB_stipe_skin | 0.359349 | no |
DIF_stipe_center | YFB_cap_skin | 0.506327 | no |
DIF_stipe_center | YFB_cap_tissue | 0.958545 | no |
DIF_stipe_center | YFB_gill_tissue | 0.560479 | no |
DIF_stipe_center | YFB_veil | 0.990921 | no |
DIF_stipe_center | DIF_stipe_shell | 0.604092 | no |
DIF_stipe_center | DIF_stipe_skin | 0.553376 | no |
DIF_stipe_center | DIF_cap_skin | 0.933726 | no |
DIF_stipe_center | DIF_cap_tissue | 0.544746 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.128378 | no |
DIF_stipe_shell | YFB_stipe_center | 0.705536 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.869023 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.832912 | no |
DIF_stipe_shell | YFB_cap_skin | 0.945956 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.675104 | no |
DIF_stipe_shell | YFB_gill_tissue | 0.971198 | no |
DIF_stipe_shell | YFB_veil | 0.619845 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.968938 | no |
DIF_stipe_shell | DIF_cap_skin | 0.495365 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.150303 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.105702 | no |
DIF_stipe_skin | YFB_stipe_center | 0.651099 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.826699 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.877517 | no |
DIF_stipe_skin | YFB_cap_skin | 0.976502 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.619611 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.997502 | no |
DIF_stipe_skin | YFB_veil | 0.561898 | no |
DIF_stipe_skin | DIF_cap_skin | 0.440253 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.127200 | no |
DIF_cap_skin | DIF_gill_tissue | 0.598975 | no |
DIF_cap_skin | YFB_stipe_center | 0.857375 | no |
DIF_cap_skin | YFB_stipe_shell | 0.696474 | no |
DIF_cap_skin | YFB_stipe_skin | 0.274857 | no |
DIF_cap_skin | YFB_cap_skin | 0.404825 | no |
DIF_cap_skin | YFB_cap_tissue | 0.880678 | no |
DIF_cap_skin | YFB_gill_tissue | 0.456864 | no |
DIF_cap_skin | YFB_veil | 0.923483 | no |
DIF_cap_skin | DIF_cap_tissue | 0.659105 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.968382 | no |
DIF_cap_tissue | YFB_stipe_center | 0.443780 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.289869 | no |
DIF_cap_tissue | YFB_stipe_skin | 0.058732 | no |
DIF_cap_tissue | YFB_cap_skin | 0.113653 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.474218 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.138696 | no |
DIF_cap_tissue | YFB_veil | 0.532264 | no |
Orthofinder run ID | 1 |
Orthogroup | 2999 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Agaricus bisporus var bisporus H39 | AgabiH39|000320 |
Agaricus bisporus var bisporus H97 | AgabiH97|000320 (this protein) |
Rhodonia placenta FPRL280 | RhoplFPRL280|8_42 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|000320 MSLPTKKLGGYDFYRNVLGSPKYIVAPMVDQSELAWRKLSRRYGAQVVYSPMINAKMFATQSNKHYREINFNTVC GEEGDLTVDRPLVVQFCANDPDQLLASAKIIEPHCDAIDINLGCPQDIAKKGKYGAYLQDDWDLIYKLINILHTN LSIPVTAKFRVFPTVEKTVAYAKMLESAGAQILTCHGRIREQRGVNTGLADWTKIRAVKEAVSVPVFANGNVLYQ SDIFDCLKATGADGVMSAEGQLYNPALFHGLTSLSTPPPKDTTYLSDEDILLRHPRHCDLAIEYLDIVLSQKTPT IVSAVKGHLFKIMRPGLTKEKDLRERLGKVRVNPKAPREGYQEYLRICHELKERMERDEKSVGGRLLTELIETEP VTGIQVMPHWLAQPYFRPPPSKSQPEPKASTLIKRVHTDIEEIRDDEEVKRVKMDDNYPTMGVSSEIQIPG* |
Coding | >AgabiH97|000320 ATGTCGCTGCCCACAAAAAAGCTGGGAGGCTATGATTTCTACAGAAATGTATTGGGCAGTCCAAAATACATTGTT GCCCCGATGGTTGACCAGAGCGAGCTGGCCTGGCGAAAACTGTCGCGGAGATATGGAGCACAAGTGGTGTACTCG CCCATGATCAATGCCAAAATGTTTGCAACACAGTCAAATAAACACTACCGCGAAATAAATTTCAACACTGTCTGC GGCGAGGAGGGCGATTTAACAGTCGATCGGCCTCTTGTCGTCCAGTTCTGCGCCAACGACCCCGACCAATTGTTG GCGTCTGCCAAAATTATCGAACCCCACTGTGATGCCATTGACATCAACCTTGGTTGCCCTCAGGACATCGCCAAG AAGGGCAAATATGGCGCCTACCTCCAGGACGACTGGGATCTCATATATAAACTCATCAATATCCTCCATACAAAC CTCTCGATACCTGTCACCGCCAAATTCCGTGTCTTTCCTACTGTTGAAAAGACGGTAGCCTACGCGAAGATGCTG GAAAGTGCTGGTGCTCAAATCCTTACTTGCCATGGCCGAATACGAGAACAACGGGGTGTCAATACCGGTCTTGCT GATTGGACCAAAATTCGGGCGGTCAAAGAGGCTGTTTCCGTTCCCGTTTTTGCCAACGGCAACGTCTTATACCAA TCCGATATTTTTGACTGCCTCAAAGCAACGGGTGCTGATGGCGTTATGAGCGCCGAAGGACAGTTGTACAACCCT GCACTCTTTCATGGTCTCACATCCCTCTCTACCCCTCCACCGAAAGACACGACGTATCTGTCAGATGAAGATATC TTGTTGCGACACCCTCGACATTGTGATCTCGCCATCGAATACCTTGATATCGTTCTTTCTCAAAAGACCCCGACG ATAGTTAGCGCTGTAAAAGGCCACTTGTTCAAGATCATGCGCCCCGGCTTGACGAAGGAAAAGGACTTGAGAGAA CGCTTGGGCAAGGTTAGGGTGAATCCCAAGGCTCCAAGGGAGGGATATCAAGAATATTTGAGAATATGCCATGAA TTGAAAGAACGAATGGAGCGCGATGAGAAGTCTGTGGGAGGTAGACTCCTGACTGAACTCATCGAAACAGAACCT GTGACGGGAATACAAGTCATGCCTCACTGGCTTGCACAACCGTATTTTAGGCCACCTCCATCCAAATCGCAACCC GAACCCAAAGCATCCACTCTTATCAAGCGCGTCCATACGGACATAGAGGAAATCAGAGACGATGAAGAGGTGAAA CGAGTGAAAATGGACGATAATTATCCCACAATGGGAGTAAGTTCAGAAATTCAGATACCCGGATAG |
Transcript | >AgabiH97|000320 ATGTCGCTGCCCACAAAAAAGCTGGGAGGCTATGATTTCTACAGAAATGTATTGGGCAGTCCAAAATACATTGTT GCCCCGATGGTTGACCAGAGCGAGCTGGCCTGGCGAAAACTGTCGCGGAGATATGGAGCACAAGTGGTGTACTCG CCCATGATCAATGCCAAAATGTTTGCAACACAGTCAAATAAACACTACCGCGAAATAAATTTCAACACTGTCTGC GGCGAGGAGGGCGATTTAACAGTCGATCGGCCTCTTGTCGTCCAGTTCTGCGCCAACGACCCCGACCAATTGTTG GCGTCTGCCAAAATTATCGAACCCCACTGTGATGCCATTGACATCAACCTTGGTTGCCCTCAGGACATCGCCAAG AAGGGCAAATATGGCGCCTACCTCCAGGACGACTGGGATCTCATATATAAACTCATCAATATCCTCCATACAAAC CTCTCGATACCTGTCACCGCCAAATTCCGTGTCTTTCCTACTGTTGAAAAGACGGTAGCCTACGCGAAGATGCTG GAAAGTGCTGGTGCTCAAATCCTTACTTGCCATGGCCGAATACGAGAACAACGGGGTGTCAATACCGGTCTTGCT GATTGGACCAAAATTCGGGCGGTCAAAGAGGCTGTTTCCGTTCCCGTTTTTGCCAACGGCAACGTCTTATACCAA TCCGATATTTTTGACTGCCTCAAAGCAACGGGTGCTGATGGCGTTATGAGCGCCGAAGGACAGTTGTACAACCCT GCACTCTTTCATGGTCTCACATCCCTCTCTACCCCTCCACCGAAAGACACGACGTATCTGTCAGATGAAGATATC TTGTTGCGACACCCTCGACATTGTGATCTCGCCATCGAATACCTTGATATCGTTCTTTCTCAAAAGACCCCGACG ATAGTTAGCGCTGTAAAAGGCCACTTGTTCAAGATCATGCGCCCCGGCTTGACGAAGGAAAAGGACTTGAGAGAA CGCTTGGGCAAGGTTAGGGTGAATCCCAAGGCTCCAAGGGAGGGATATCAAGAATATTTGAGAATATGCCATGAA TTGAAAGAACGAATGGAGCGCGATGAGAAGTCTGTGGGAGGTAGACTCCTGACTGAACTCATCGAAACAGAACCT GTGACGGGAATACAAGTCATGCCTCACTGGCTTGCACAACCGTATTTTAGGCCACCTCCATCCAAATCGCAACCC GAACCCAAAGCATCCACTCTTATCAAGCGCGTCCATACGGACATAGAGGAAATCAGAGACGATGAAGAGGTGAAA CGAGTGAAAATGGACGATAATTATCCCACAATGGGAGTAAGTTCAGAAATTCAGATACCCGGATAG |
Gene | >AgabiH97|000320 ATGTCGCTGCCCACAAAAAAGCTGGGAGGCTATGATTTCTACAGAAATGTATTGGGCAGTCCAAAATACATTGTT GCCCCGATGGTTGACCAGAGCGAGCTGGTGCGTGCGCCGCCGTTTTTACCGAGTTCTGTGACTCTTACCGTGGCT AGGCCTGGCGAAAACTGTCGCGGAGATATGGAGCACAAGTACGCTTTGGCCATGCTCTTTAGTCGACCTTGACTG ACACGAATCTAGGTGGTGTACTCGCCCATGATCAATGCCAAAGTCGGTGTGGCCCCTCCAGACCCCTCCAAGTTA TGACCGGAACTGACGTGACCAGATGTTTGCAACACAGTCAAATAAACACTACCGCGAAATAAATTTCAACACTGT CTGCGGCGAGGAGGGCGATTTAACAGTCGATCGGCCTCTTGTCGTCCAGTTCTGCGCCAACGACCCCGACCAATT GTTGGCGTCTGCCAAAATTATCGAACCCCACTGTGATGCCATTGACATCAACCTTGGTTGCCCTCAGGACATCGC CAAGAAGGGCAAATATGGCGCCTACCTCCAGGACGACTGGGATCTCATATATAAACTCAGTAAGCTGCGACCTTT TTACTTTGTTCATCCAATTGATTACGAACCAAAGTCAATATCCTCCATACAAACCTCTCGATACCTGTCACCGCC AAATTCCGTGTCTTTCCTACTGTTGAAAAGACGGTAGCCTACGCGAAGATGCTGGAAAGTGCTGGTGCTCAAATC CTTACTTGCCATGGCCGAATACGAGAACAACGGGGTGTCAATACCGGTCTTGCTGATTGGACCAAAATTCGGGCG GTCAAAGAGGCTGTTTCCGTTCCCGTTTTTGCCAACGGCAACGTCTTATACCAATCCGATATTTTTGACTGCCTC AAAGCAACGGGTGCTGATGGCGTTATGAGCGCCGAAGGACAGTTGTACAACCCTGCACTCTTTCATGGTCTCACA TCCCTCTCTACCCCTCCACCGAAAGACACGACGTATCTGTCAGATGAAGATATCTTGTTGCGACACCCTCGACAT TGTGATCTCGCCATCGAATACCTTGATATCGTTCTTTCTCAAAAGACCCCGACGATAGTTAGCGCTGTAAAAGGC CACTTGTTCAAGATCATGCGCCCCGGCTTGACGAAGGAAAAGGACTTGAGAGAACGCTTGGGCAAGGTTAGGGTG AATCCCAAGGCTCCAAGGGAGGGATATCAAGAATATTTGAGAATATGCCATGAATTGAAAGAACGAATGGAGGTA CATATCTTATTTCTTCTGCTCGCTATTTTCAAGCGATCTTATCTGTTATCATAGCGCGATGAGAAGTCTGTGGGA GGTAGACTCCTGACTGAACTCATCGAAACAGAACCTGTGACGGGAATACAAGTCATGCCTCACTGGCTTGCACAA CCGTATTTTAGGCCACCTCCATCCAAATCGCAACCCGAACCCAGTGCGTTTTCTCACATTTCTAAGTTTCTATAG CTACATCCTAATCATACTCAGAAGCATCCACTCTTATCAAGCGCGTCCATACGGACATAGAGGAAATCAGAGACG ATGAAGAGGTGAAACGAGTGAAAATGGACGATAATTATCCCACAATGGGAGTAAGTTCAGAAATTCAGATACCCG GATAG |