Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|000220
Gene name
Location	scaffold_1:45210..46200
Strand	+
Gene length (bp)	990
Transcript length (bp)	939
Coding sequence length (bp)	939
Protein length (aa)	313

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	5.6E-05	31	138

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|000220 MPELDLILTHSLKIMDAYTRHPKFYFNDGSIILDVERTHFRVHQSLLNRQSELFESMFSLKQPENATRVDGCLLV ELAGDSVSDMEEFLCTVYDPFYFDRLECTSDVDTLIKFISGILRISAKYDMTMIKRKCVSVLLEKFPITLAGCDR IMKSEYRYKTNAIVDAINLAHTANVPEILPWAYYISTHVSVKDLLHDPNLSWKDKALCLAGKERLWHAQKTRTHA FLFDELQSEECSVGCDGRPSVMAWSDSERLRMNPHPLEEYKKWSDLNICMNCQRDFQRRHKEARVWLWETLPELF ELGTWNGLRSDL*
Coding	>AgabiH97\|000220 ATGCCGGAGCTTGATCTCATCCTTACGCATTCTTTGAAGATAATGGACGCTTATACTCGACATCCGAAGTTCTAT TTCAACGATGGCTCGATCATCCTAGATGTAGAGCGAACACATTTCCGGGTCCATCAATCTCTTTTGAATAGACAG TCGGAGTTGTTCGAATCCATGTTTTCACTCAAGCAACCTGAGAATGCTACCCGAGTAGATGGATGTTTGCTCGTA GAACTAGCCGGAGACTCAGTTTCTGATATGGAAGAATTTCTTTGTACTGTATATGATCCATTCTACTTCGACCGA CTAGAATGTACCAGCGATGTTGATACCCTTATCAAATTCATCTCTGGCATCCTTCGCATCAGCGCAAAGTATGAC ATGACGATGATCAAACGAAAATGCGTTAGCGTTCTCCTCGAGAAATTCCCAATCACCCTCGCTGGTTGTGATAGG ATCATGAAGTCCGAGTATCGATATAAAACGAACGCTATCGTCGATGCGATCAATTTGGCACATACAGCCAATGTA CCAGAAATTTTACCATGGGCATATTATATTTCAACACACGTCTCGGTGAAAGACTTACTGCACGACCCGAATTTG TCTTGGAAAGACAAAGCATTATGTCTGGCAGGAAAGGAGCGTCTATGGCATGCCCAAAAAACTCGAACTCATGCA TTTCTTTTCGATGAATTACAATCGGAAGAGTGTAGTGTGGGATGTGATGGAAGGCCTTCGGTGATGGCATGGAGT GATAGTGAGCGATTAAGGATGAATCCACATCCGTTGGAGGAGTATAAAAAGTGGTCAGACCTTAATATTTGTATG AACTGTCAGAGGGATTTTCAGAGAAGACACAAAGAGGCGAGGGTGTGGTTATGGGAAACTTTGCCAGAGTTGTTC GAGCTTGGGACATGGAACGGTTTGAGGAGCGACTTGTAG
Transcript	>AgabiH97\|000220 ATGCCGGAGCTTGATCTCATCCTTACGCATTCTTTGAAGATAATGGACGCTTATACTCGACATCCGAAGTTCTAT TTCAACGATGGCTCGATCATCCTAGATGTAGAGCGAACACATTTCCGGGTCCATCAATCTCTTTTGAATAGACAG TCGGAGTTGTTCGAATCCATGTTTTCACTCAAGCAACCTGAGAATGCTACCCGAGTAGATGGATGTTTGCTCGTA GAACTAGCCGGAGACTCAGTTTCTGATATGGAAGAATTTCTTTGTACTGTATATGATCCATTCTACTTCGACCGA CTAGAATGTACCAGCGATGTTGATACCCTTATCAAATTCATCTCTGGCATCCTTCGCATCAGCGCAAAGTATGAC ATGACGATGATCAAACGAAAATGCGTTAGCGTTCTCCTCGAGAAATTCCCAATCACCCTCGCTGGTTGTGATAGG ATCATGAAGTCCGAGTATCGATATAAAACGAACGCTATCGTCGATGCGATCAATTTGGCACATACAGCCAATGTA CCAGAAATTTTACCATGGGCATATTATATTTCAACACACGTCTCGGTGAAAGACTTACTGCACGACCCGAATTTG TCTTGGAAAGACAAAGCATTATGTCTGGCAGGAAAGGAGCGTCTATGGCATGCCCAAAAAACTCGAACTCATGCA TTTCTTTTCGATGAATTACAATCGGAAGAGTGTAGTGTGGGATGTGATGGAAGGCCTTCGGTGATGGCATGGAGT GATAGTGAGCGATTAAGGATGAATCCACATCCGTTGGAGGAGTATAAAAAGTGGTCAGACCTTAATATTTGTATG AACTGTCAGAGGGATTTTCAGAGAAGACACAAAGAGGCGAGGGTGTGGTTATGGGAAACTTTGCCAGAGTTGTTC GAGCTTGGGACATGGAACGGTTTGAGGAGCGACTTGTAG
Gene	>AgabiH97\|000220 ATGCCGGAGCTTGATCTCATCCTTACGCATTCTTTGAAGATAATGGACGCTTATACTCGACATCCGAAGTTCTAT TTCAACGATGGCTCGATCATCCTAGATGTAGAGCGAACACATTTCCGGGTCCATCAATCTCTTTTGAATAGACAG TCGGAGTTGTTCGAATCCATGTTTTCACTCAAGCAACCTGAGAATGCTACCCGAGTAGATGGATGTTTGCTCGTA GAACTAGCCGGAGACTCAGTTTCTGATATGGAAGAATTTCTTTGTACTGTATATGATCCATTGTGCGCTATACGT CATCTCTTCCTATTTCTTCTAATCAAACAATCGCATAGCTACTTCGACCGACTAGAATGTACCAGCGATGTTGAT ACCCTTATCAAATTCATCTCTGGCATCCTTCGCATCAGCGCAAAGTATGACATGACGATGATCAAACGAAAATGC GTTAGCGTTCTCCTCGAGAAATTCCCAATCACCCTCGCTGGTTGTGATAGGATCATGAAGTCCGAGTATCGATAT AAAACGAACGCTATCGTCGATGCGATCAATTTGGCACATACAGCCAATGTACCAGAAATTTTACCATGGGCATAT TATATTTCAACACACGTCTCGGTGAAAGACTTACTGCACGACCCGAATTTGTCTTGGAAAGACAAAGCATTATGT CTGGCAGGAAAGGAGCGTCTATGGCATGCCCAAAAAACTCGAACTCATGCATTTCTTTTCGATGAATTACAATCG GAAGAGTGTAGTGTGGGATGTGATGGAAGGCCTTCGGTGATGGCATGGAGTGATAGTGAGCGATTAAGGATGAAT CCACATCCGTTGGAGGAGTATAAAAAGTGGTCAGACCTTAATATTTGTATGAACTGTCAGAGGGATTTTCAGAGA AGACACAAAGAGGCGAGGGTGTGGTTATGGGAAACTTTGCCAGAGTTGTTCGAGCTTGGGACATGGAACGGTTTG AGGAGCGACTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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