Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|000200
Gene name
Location	scaffold_1:39324..40407
Strand	+
Gene length (bp)	1083
Transcript length (bp)	1026
Coding sequence length (bp)	1026
Protein length (aa)	342

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	2.5E-07	47	155

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 64	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|000200 MSSGSPNSSFDCPSPAHTSSSISPPSIDWKLMASQHPDFWFHDGSIVLCADKMLFRVHQTVLAKHSEVFEDLFSL SPPAAEEDDIVDGCRVVLLHDSKEDFIDLLNAIYNPSYFDDLPSDAGVGQVLTYISGVLRLSTKYLIRSLRQRCI TLLISKFPTTFDDYVAKSNRDPPEKYDSDSVMRAAVLAQENNVPEILPYAYYCIARMKPRRMLSQRHCDISWRDK VVCLVGRERLREAEMTLSYLFLLVFQRAPTCETYLCADARLPHAEWHVIEAAKSPSPLREYTTWSRLNLCQACVA HCQREHAKGRREVWERLPGIFGLASWEQLRKQQGFLDGDPK*
Coding	>AgabiH97\|000200 ATGTCTTCCGGATCCCCCAACTCCAGTTTCGACTGTCCCTCACCCGCGCACACGTCGTCCTCGATATCACCCCCT AGCATAGACTGGAAGCTAATGGCTTCCCAGCATCCGGATTTTTGGTTTCATGATGGGTCTATTGTCCTGTGCGCA GACAAGATGCTCTTTCGTGTGCATCAGACTGTTCTAGCGAAACATTCGGAGGTGTTTGAAGACCTATTCTCCCTG TCACCACCCGCAGCGGAAGAAGACGACATTGTGGATGGCTGCAGAGTCGTTCTACTTCATGACTCCAAGGAAGAC TTCATTGATTTGTTGAATGCCATATATAATCCGTCGTATTTTGATGACCTGCCTTCAGACGCCGGCGTCGGCCAA GTGCTGACCTATATCAGCGGTGTTCTCCGTCTCAGTACAAAATATCTCATCCGTTCACTTCGACAACGATGTATC ACTCTCCTTATTTCAAAATTCCCGACTACCTTTGACGACTACGTTGCCAAGTCAAATCGTGATCCTCCCGAAAAA TACGATTCTGATTCGGTCATGCGGGCCGCAGTGCTTGCTCAAGAAAATAATGTACCGGAGATTCTCCCCTATGCA TATTATTGTATAGCTCGCATGAAACCCCGGAGAATGCTTTCCCAACGCCATTGCGATATCTCGTGGAGAGACAAG GTGGTCTGTCTCGTTGGGAGAGAGCGACTACGGGAGGCAGAAATGACTCTCTCCTATCTATTTCTTCTCGTCTTT CAACGAGCGCCAACATGCGAAACATACCTATGTGCTGACGCGCGATTACCGCATGCCGAATGGCATGTCATCGAG GCGGCGAAATCACCGAGTCCTTTACGCGAGTATACCACATGGAGTAGGTTGAACCTTTGTCAGGCGTGTGTAGCG CATTGTCAGAGAGAACATGCAAAGGGTCGTAGGGAAGTTTGGGAACGATTGCCGGGGATTTTTGGATTGGCGAGT TGGGAACAGCTGAGGAAGCAACAAGGGTTCTTGGATGGAGATCCCAAGTAG
Transcript	>AgabiH97\|000200 ATGTCTTCCGGATCCCCCAACTCCAGTTTCGACTGTCCCTCACCCGCGCACACGTCGTCCTCGATATCACCCCCT AGCATAGACTGGAAGCTAATGGCTTCCCAGCATCCGGATTTTTGGTTTCATGATGGGTCTATTGTCCTGTGCGCA GACAAGATGCTCTTTCGTGTGCATCAGACTGTTCTAGCGAAACATTCGGAGGTGTTTGAAGACCTATTCTCCCTG TCACCACCCGCAGCGGAAGAAGACGACATTGTGGATGGCTGCAGAGTCGTTCTACTTCATGACTCCAAGGAAGAC TTCATTGATTTGTTGAATGCCATATATAATCCGTCGTATTTTGATGACCTGCCTTCAGACGCCGGCGTCGGCCAA GTGCTGACCTATATCAGCGGTGTTCTCCGTCTCAGTACAAAATATCTCATCCGTTCACTTCGACAACGATGTATC ACTCTCCTTATTTCAAAATTCCCGACTACCTTTGACGACTACGTTGCCAAGTCAAATCGTGATCCTCCCGAAAAA TACGATTCTGATTCGGTCATGCGGGCCGCAGTGCTTGCTCAAGAAAATAATGTACCGGAGATTCTCCCCTATGCA TATTATTGTATAGCTCGCATGAAACCCCGGAGAATGCTTTCCCAACGCCATTGCGATATCTCGTGGAGAGACAAG GTGGTCTGTCTCGTTGGGAGAGAGCGACTACGGGAGGCAGAAATGACTCTCTCCTATCTATTTCTTCTCGTCTTT CAACGAGCGCCAACATGCGAAACATACCTATGTGCTGACGCGCGATTACCGCATGCCGAATGGCATGTCATCGAG GCGGCGAAATCACCGAGTCCTTTACGCGAGTATACCACATGGAGTAGGTTGAACCTTTGTCAGGCGTGTGTAGCG CATTGTCAGAGAGAACATGCAAAGGGTCGTAGGGAAGTTTGGGAACGATTGCCGGGGATTTTTGGATTGGCGAGT TGGGAACAGCTGAGGAAGCAACAAGGGTTCTTGGATGGAGATCCCAAGTAG
Gene	>AgabiH97\|000200 ATGTCTTCCGGATCCCCCAACTCCAGTTTCGACTGTCCCTCACCCGCGCACACGTCGTCCTCGATATCACCCCCT AGCATAGACTGGAAGCTAATGGCTTCCCAGCATCCGGATTTTTGGTTTCATGATGGGTCTATTGTCCTGTGCGCA GACAAGATGCTCTTTCGTGTGCATCAGACTGTTCTAGCGAAACATTCGGAGGTGTTTGAAGACCTATTCTCCCTG TCACCACCCGCAGCGGAAGAAGACGACATTGTGGATGGCTGCAGAGTCGTTCTACTTCATGACTCCAAGGAAGAC TTCATTGATTTGTTGAATGCCATATATAATCCGTCGTACGTTTGTAGCAACCTTGTGTTCCGTGGTATCGGGTCT TCATGACAAATATCCAGGTATTTTGATGACCTGCCTTCAGACGCCGGCGTCGGCCAAGTGCTGACCTATATCAGC GGTGTTCTCCGTCTCAGTACAAAATATCTCATCCGTTCACTTCGACAACGATGTATCACTCTCCTTATTTCAAAA TTCCCGACTACCTTTGACGACTACGTTGCCAAGTCAAATCGTGATCCTCCCGAAAAATACGATTCTGATTCGGTC ATGCGGGCCGCAGTGCTTGCTCAAGAAAATAATGTACCGGAGATTCTCCCCTATGCATATTATTGTATAGCTCGC ATGAAACCCCGGAGAATGCTTTCCCAACGCCATTGCGATATCTCGTGGAGAGACAAGGTGGTCTGTCTCGTTGGG AGAGAGCGACTACGGGAGGCAGAAATGACTCTCTCCTATCTATTTCTTCTCGTCTTTCAACGAGCGCCAACATGC GAAACATACCTATGTGCTGACGCGCGATTACCGCATGCCGAATGGCATGTCATCGAGGCGGCGAAATCACCGAGT CCTTTACGCGAGTATACCACATGGAGTAGGTTGAACCTTTGTCAGGCGTGTGTAGCGCATTGTCAGAGAGAACAT GCAAAGGGTCGTAGGGAAGTTTGGGAACGATTGCCGGGGATTTTTGGATTGGCGAGTTGGGAACAGCTGAGGAAG CAACAAGGGTTCTTGGATGGAGATCCCAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail