Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF17919
Short nameRT_RNaseH_2
Long nameRNase H-like domain found in reverse transcriptase
Proteins with at least one of this domain139
Total domain count139
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
AgabiH97|001780 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|012750 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.4E-38 95 191
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-39 123 225
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.3E-20 338 395
PF00665 rve Integrase core domain 5.5E-12 413 509
AgabiH97|012780 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.2E-17 234 393
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-37 459 555
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-38 487 589
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 702 759
PF00665 rve Integrase core domain 1.1E-11 777 873
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.9E-09 1073 1122
AgabiH97|012870 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.4E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 850 908
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1222 1271
AgabiH97|012940 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|013030 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.3E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 919 977
AgabiH97|013050 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|013140 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.2E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|013200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.2E-19 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|013210 PF13650 Asp_protease_2 Aspartyl protease 1.0E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.7E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 2.6E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.4E-17 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.2E-19 723 780
PF00665 rve Integrase core domain 1.0E-11 798 894
AgabiH97|013410 PF13650 Asp_protease_2 Aspartyl protease 2.0E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.3E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 6.0E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-19 723 780
PF00665 rve Integrase core domain 1.0E-11 798 894
AgabiH97|016300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.4E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 850 908
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1222 1271
AgabiH97|016330 PF00098 zf-CCHC Zinc knuckle 2.1E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 833 994
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1057 1157
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1083 1188
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1302 1360
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1674 1723
AgabiH97|016500 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-36 94 190
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-37 122 224
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.6E-19 340 394
PF00665 rve Integrase core domain 1.0E-10 412 508
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-09 708 757
AgabiH97|018070 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.3E-31 474 574
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-34 500 605
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.1E-20 719 777
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.7E-13 1074 1123
AgabiH97|018360 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|019410 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.3E-23 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-13 1289 1338
AgabiH97|019450 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|020510 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.5E-24 326 487
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.6E-31 550 650
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.5E-34 576 681
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-19 795 853
AgabiH97|020580 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.0E-25 62 223
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.9E-18 286 354
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.5E-07 312 354
AgabiH97|020610 PF13650 Asp_protease_2 Aspartyl protease 1.1E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.2E-07 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.0E-08 34 131
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.3E-19 724 780
PF00665 rve Integrase core domain 9.3E-12 798 894
AgabiH97|023420 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.7E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|023970 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.8E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.1E-20 734 792
AgabiH97|024010 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.3E-13 172 270
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-10 204 302
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.2E-15 469 519
AgabiH97|024950 PF13650 Asp_protease_2 Aspartyl protease 2.1E-05 573 656
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.6E-06 573 659
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-22 849 1011
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.2E-23 1077 1180
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.2E-30 1107 1210
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.2E-15 1343 1398
AgabiH97|025070 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.0E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.5E-19 377 433
AgabiH97|025630 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 36 195
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.0E-37 261 357
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.1E-39 289 391
AgabiH97|025670 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.2E-26 2 128
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.6E-35 191 286
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-32 216 322
AgabiH97|025690 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.2E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.8E-34 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.9E-11 850 894
AgabiH97|025740 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.6E-20 3 119
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.1E-31 188 288
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-33 214 319
AgabiH97|025820 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.2E-26 2 128
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.6E-35 191 286
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-32 216 322
AgabiH97|026110 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|027180 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-23 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-13 1291 1340
AgabiH97|027810 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.6E-30 674 771
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|028600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|028990 PF00098 zf-CCHC Zinc knuckle 1.8E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.0E-24 833 994
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-30 1057 1157
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-33 1083 1188
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.6E-20 1302 1360
AgabiH97|032350 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|032380 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.4E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 2.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-37 441 537
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-38 469 571
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.2E-19 685 741
PF00665 rve Integrase core domain 1.0E-10 759 855
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1055 1104
AgabiH97|035280 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|035290 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.5E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-33 698 803
AgabiH97|035310 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-20 3 125
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-30 188 288
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 214 319
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.0E-20 433 491
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 805 854
AgabiH97|035330 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|036420 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.3E-32 58 153
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.8E-30 83 177
AgabiH97|036800 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.7E-12 710 808
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-09 742 840
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.9E-15 1007 1058
AgabiH97|036920 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-07 1 51
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.5E-35 114 209
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 139 245
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.0E-19 331 387
AgabiH97|039110 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|039210 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-25 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.7E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.3E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|039280 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|039310 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|039690 PF13650 Asp_protease_2 Aspartyl protease 4.0E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.3E-07 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-08 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.7E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.0E-19 724 780
PF00665 rve Integrase core domain 6.4E-11 798 894
AgabiH97|039730 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-07 455 555
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.2E-09 484 587
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-17 802 856
AgabiH97|039850 PF13650 Asp_protease_2 Aspartyl protease 2.1E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.6E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 4.4E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 508 610
AgabiH97|039880 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.2E-24 1224 1385
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.9E-30 1448 1548
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.8E-33 1474 1579
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.3E-20 1693 1751
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.3E-13 2065 2114
AgabiH97|041140 PF03732 Retrotrans_gag Retrotransposon gag protein 1.5E-06 136 199
PF00098 zf-CCHC Zinc knuckle 3.6E-04 306 321
PF13650 Asp_protease_2 Aspartyl protease 7.8E-07 362 452
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.3E-08 364 454
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-09 371 469
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.3E-11 645 730
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 796 892
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.6E-38 824 926
AgabiH97|044720 PF08284 RVP_2 Retroviral aspartyl protease 3.3E-04 376 476
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.8E-23 835 996
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.3E-08 1059 1102
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-19 1104 1169
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.6E-20 1283 1341
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1655 1704
AgabiH97|044800 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 377 433
PF00665 rve Integrase core domain 4.1E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.3E-09 747 796
AgabiH97|048800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.6E-22 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|048860 PF13650 Asp_protease_2 Aspartyl protease 5.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.5E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.7E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.3E-38 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.7E-39 508 610
AgabiH97|048890 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.2E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 4.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.3E-09 1094 1143
AgabiH97|050310 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.9E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.2E-20 917 975
AgabiH97|050320 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-20 3 125
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.2E-31 188 288
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.8E-34 214 319
AgabiH97|050330 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.4E-20 734 792
AgabiH97|051070 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|051180 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-18 167 326
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-37 392 488
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.6E-39 421 522
AgabiH97|059860 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.9E-30 161 244
AgabiH97|059920 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.3E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-29 161 244
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 328 384
PF00665 rve Integrase core domain 7.8E-12 402 498
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.1E-07 698 735
AgabiH97|060290 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-31 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.6E-13 1106 1155
AgabiH97|060470 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-17 78 237
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 303 399
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.5E-38 331 433
AgabiH97|062770 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-23 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.4E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1287 1336
AgabiH97|063990 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 361 522
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.7E-30 585 685
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.9E-34 611 716
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 830 888
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1202 1251
AgabiH97|066170 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|066760 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|069720 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-05 108 195
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 830 991
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1054 1154
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1080 1185
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.6E-20 1299 1357
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1671 1720
AgabiH97|076030 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-32 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.7E-16 1010 1068
AgabiH97|076080 PF13650 Asp_protease_2 Aspartyl protease 1.4E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.1E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 3.6E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-14 267 396
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-37 462 558
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.2E-38 490 592
AgabiH97|076140 PF16297 DUF4939 Domain of unknown function (DUF4939) 8.8E-08 161 253
PF19259 Ty3_capsid Ty3 transposon capsid-like protein 5.0E-11 162 330
PF03732 Retrotrans_gag Retrotransposon gag protein 7.9E-09 209 306
PF08284 RVP_2 Retroviral aspartyl protease 5.6E-05 525 623
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-32 788 947
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.4E-30 1011 1106
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.4E-33 1036 1141
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-13 1262 1311
AgabiH97|076190 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.7E-29 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-12 1289 1338
AgabiH97|077340 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-24 62 223
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-30 286 386
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-33 312 417
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.4E-20 531 589
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.0E-14 903 952
AgabiH97|077360 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-24 212 373
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-30 436 536
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-33 462 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-20 681 739
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1053 1102
AgabiH97|077380 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|078540 PF03732 Retrotrans_gag Retrotransposon gag protein 3.8E-08 144 215
PF00098 zf-CCHC Zinc knuckle 3.8E-06 323 338
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-31 809 896
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.8E-20 837 896
AgabiH97|078570 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.2E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.2E-20 919 977
AgabiH97|078600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-12 213 348
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-38 378 474
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.9E-33 406 495
AgabiH97|078640 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-18 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|078660 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-35 57 152
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.2E-34 82 188
AgabiH97|079530 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.6E-30 454 554
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 480 585
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.1E-20 699 757
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.6E-14 1071 1120
AgabiH97|081740 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-29 187 346
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.9E-30 410 505
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-32 435 540
AgabiH97|081750 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.1E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.4E-20 919 977
AgabiH97|082290 PF13650 Asp_protease_2 Aspartyl protease 7.8E-08 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.7E-09 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-10 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.7E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 508 610
AgabiH97|082310 PF08284 RVP_2 Retroviral aspartyl protease 1.4E-05 54 154
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-16 371 532
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-20 598 701
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.7E-28 630 731
AgabiH97|082340 PF13650 Asp_protease_2 Aspartyl protease 3.3E-05 1 80
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.5E-06 1 82
PF08284 RVP_2 Retroviral aspartyl protease 4.7E-10 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.4E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 445 541
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.6E-39 473 575
AgabiH97|082470 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-20 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-28 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-32 516 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.2E-19 735 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|082500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.7E-22 813 973
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.8E-30 1037 1137
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-33 1063 1168
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.5E-19 1283 1340
AgabiH97|084900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 212 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.6E-38 437 533
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.2E-39 465 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.9E-19 681 737
PF00665 rve Integrase core domain 5.9E-12 755 851
AgabiH97|084980 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.4E-20 162 321
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.5E-18 385 486
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.2E-27 416 516
AgabiH97|085010 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-29 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.1E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|087600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.9E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.1E-20 917 975
AgabiH97|089430 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|089500 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.7E-07 522 622
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.7E-09 551 654
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.0E-18 869 923
AgabiH97|089910 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-23 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|092290 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.2E-20 674 745
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.3E-09 700 745
AgabiH97|094020 PF13650 Asp_protease_2 Aspartyl protease 3.0E-07 120 209
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.7E-08 121 207
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.9E-08 709 807
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-10 738 841
AgabiH97|094110 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-08 379 477
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-10 408 511
AgabiH97|094290 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.4E-19 166 325
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.2E-38 372 468
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.6E-38 400 502
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.5E-19 601 657
AgabiH97|096330 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.5E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.7E-10 1291 1331
AgabiH97|097630 PF00098 zf-CCHC Zinc knuckle 2.2E-05 381 396
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-24 934 1094
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.1E-30 1158 1258
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 1185 1289
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.7E-20 1403 1461
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.1E-13 1775 1824
AgabiH97|097670 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-08 1 69
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-30 132 232
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.8E-34 158 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-20 377 435
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.2E-13 749 798
AgabiH97|097940 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.4E-30 89 189
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 115 220
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-20 334 392
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.2E-14 706 755
AgabiH97|097960 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.1E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|097980 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|098700 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.5E-09 167 265
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.9E-09 196 299
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.4E-19 519 570
AgabiH97|100720 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-15 5 91
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.0E-30 154 251
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 180 285
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.9E-20 399 457
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.8E-14 771 820
AgabiH97|100730 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-24 97 258
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.9E-30 321 421
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 347 452
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.6E-20 566 624
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.4E-14 938 987
AgabiH97|100750 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|100780 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-24 97 258
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.0E-31 321 421
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 347 452
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.6E-20 566 624
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.4E-14 938 987
AgabiH97|106570 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-24 834 995
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.8E-30 1058 1158
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1084 1189
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1303 1361
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.3E-13 1675 1724
AgabiH97|107050 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|107880 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-34 133 220
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-21 161 225
AgabiH97|107890 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|108160 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.8E-29 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-13 423 470
AgabiH97|108240 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-19 190 349
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.9E-38 415 511
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 443 545
AgabiH97|110090 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-22 495 656
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.1E-21 729 805
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 731 836
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.8E-20 950 1008
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1238 1287
AgabiH97|110160 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|110200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|110240 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|113120 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.5E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-19 917 975
AgabiH97|113140 PF08284 RVP_2 Retroviral aspartyl protease 3.2E-04 76 176
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.8E-22 535 699
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-29 744 844
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.6E-33 770 875
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.6E-20 989 1047
AgabiH97|113160 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-30 280 380
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.3E-33 306 411
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.4E-20 525 583
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 897 946
AgabiH97|117640 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-23 1 72
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.7E-10 1 38
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.9E-19 186 242
AgabiH97|117650 PF00098 zf-CCHC Zinc knuckle 2.0E-05 262 277
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-24 790 951
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-29 1014 1114
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-33 1040 1145
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.5E-20 1259 1317
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.9E-13 1631 1680
AgabiH97|117670 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.7E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.5E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-06 1010 1046
AgabiH97|117740 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-27 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.8E-14 1010 1059
AgabiH97|117810 PF00098 zf-CCHC Zinc knuckle 2.0E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-24 809 970
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 1033 1133
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.5E-33 1059 1164
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.0E-20 1278 1336
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1626 1675
AgabiH97|118340 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.1E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-15 1010 1068
AgabiH97|118430 PF03732 Retrotrans_gag Retrotransposon gag protein 1.9E-07 145 216
PF00098 zf-CCHC Zinc knuckle 1.3E-03 295 311
PF00098 zf-CCHC Zinc knuckle 4.1E-04 323 338
PF13650 Asp_protease_2 Aspartyl protease 1.8E-06 379 469
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.2E-07 381 471
PF08284 RVP_2 Retroviral aspartyl protease 5.4E-09 388 487
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-18 609 768
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-36 834 930
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.6E-38 862 964
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-19 1078 1134
PF00665 rve Integrase core domain 4.4E-10 1152 1248
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.7E-09 1448 1497
AgabiH97|119090 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.9E-19 639 695
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.4E-13 1009 1058
AgabiH97|119520 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-18 275 390
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-10 453 505
AgabiH97|119560 PF08284 RVP_2 Retroviral aspartyl protease 3.4E-09 2 98
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.7E-20 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-16 445 496
AgabiH97|119630 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.7E-31 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 698 798

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