Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF13975
Short namegag-asp_proteas
Long namegag-polyprotein putative aspartyl protease
Proteins with at least one of this domain29
Total domain count29
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
AgabiH97|012730 PF13650 Asp_protease_2 Aspartyl protease 2.1E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.5E-09 26 117
PF08284 RVP_2 Retroviral aspartyl protease 7.7E-10 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.4E-10 255 358
AgabiH97|013210 PF13650 Asp_protease_2 Aspartyl protease 1.0E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.7E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 2.6E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.4E-17 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.2E-19 723 780
PF00665 rve Integrase core domain 1.0E-11 798 894
AgabiH97|013410 PF13650 Asp_protease_2 Aspartyl protease 2.0E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.3E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 6.0E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-19 723 780
PF00665 rve Integrase core domain 1.0E-11 798 894
AgabiH97|016510 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.0E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.0E-09 34 133
AgabiH97|020610 PF13650 Asp_protease_2 Aspartyl protease 1.1E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.2E-07 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.0E-08 34 131
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.3E-19 724 780
PF00665 rve Integrase core domain 9.3E-12 798 894
AgabiH97|024950 PF13650 Asp_protease_2 Aspartyl protease 2.1E-05 573 656
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.6E-06 573 659
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-22 849 1011
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.2E-23 1077 1180
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.2E-30 1107 1210
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.2E-15 1343 1398
AgabiH97|025620 PF13650 Asp_protease_2 Aspartyl protease 9.8E-09 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 4.2E-09 26 117
PF08284 RVP_2 Retroviral aspartyl protease 2.4E-11 34 132
AgabiH97|032380 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.4E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 2.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-37 441 537
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-38 469 571
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.2E-19 685 741
PF00665 rve Integrase core domain 1.0E-10 759 855
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1055 1104
AgabiH97|039690 PF13650 Asp_protease_2 Aspartyl protease 4.0E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.3E-07 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-08 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.7E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.0E-19 724 780
PF00665 rve Integrase core domain 6.4E-11 798 894
AgabiH97|039720 PF13650 Asp_protease_2 Aspartyl protease 3.7E-07 166 255
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.0E-07 166 253
AgabiH97|039850 PF13650 Asp_protease_2 Aspartyl protease 2.1E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.6E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 4.4E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 508 610
AgabiH97|040720 PF13650 Asp_protease_2 Aspartyl protease 1.1E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.0E-09 26 117
PF08284 RVP_2 Retroviral aspartyl protease 6.9E-10 34 132
AgabiH97|041140 PF03732 Retrotrans_gag Retrotransposon gag protein 1.5E-06 136 199
PF00098 zf-CCHC Zinc knuckle 3.6E-04 306 321
PF13650 Asp_protease_2 Aspartyl protease 7.8E-07 362 452
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.3E-08 364 454
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-09 371 469
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.3E-11 645 730
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 796 892
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.6E-38 824 926
AgabiH97|044810 PF13650 Asp_protease_2 Aspartyl protease 9.1E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.6E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 2.3E-11 32 134
AgabiH97|048860 PF13650 Asp_protease_2 Aspartyl protease 5.3E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.5E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.7E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.3E-38 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.7E-39 508 610
AgabiH97|048890 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.2E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 4.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.3E-09 1094 1143
AgabiH97|059850 PF13650 Asp_protease_2 Aspartyl protease 5.8E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.1E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 7.6E-10 34 132
AgabiH97|068530 PF00240 ubiquitin Ubiquitin family 2.7E-08 4 71
PF09668 Asp_protease Aspartyl protease 1.7E-60 165 288
PF13650 Asp_protease_2 Aspartyl protease 1.2E-09 191 278
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.1E-20 191 281
AgabiH97|076080 PF13650 Asp_protease_2 Aspartyl protease 1.4E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.1E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 3.6E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-14 267 396
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-37 462 558
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.2E-38 490 592
AgabiH97|081830 PF13650 Asp_protease_2 Aspartyl protease 2.0E-07 466 549
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.3E-08 466 551
PF08284 RVP_2 Retroviral aspartyl protease 8.7E-06 469 564
AgabiH97|082290 PF13650 Asp_protease_2 Aspartyl protease 7.8E-08 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.7E-09 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-10 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.7E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 508 610
AgabiH97|082340 PF13650 Asp_protease_2 Aspartyl protease 3.3E-05 1 80
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.5E-06 1 82
PF08284 RVP_2 Retroviral aspartyl protease 4.7E-10 2 97
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.4E-19 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 445 541
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.6E-39 473 575
AgabiH97|086810 PF13650 Asp_protease_2 Aspartyl protease 3.8E-07 167 256
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.0E-07 167 254
AgabiH97|094020 PF13650 Asp_protease_2 Aspartyl protease 3.0E-07 120 209
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.7E-08 121 207
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.9E-08 709 807
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-10 738 841
AgabiH97|107800 PF13650 Asp_protease_2 Aspartyl protease 2.6E-07 166 255
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.7E-07 166 253
AgabiH97|108080 PF13650 Asp_protease_2 Aspartyl protease 5.0E-06 31 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.0E-07 32 117
PF08284 RVP_2 Retroviral aspartyl protease 2.1E-09 34 133
AgabiH97|110130 PF13650 Asp_protease_2 Aspartyl protease 4.0E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.6E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.0E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-19 255 414
AgabiH97|117630 PF13650 Asp_protease_2 Aspartyl protease 5.6E-08 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.1E-09 27 117
PF08284 RVP_2 Retroviral aspartyl protease 5.3E-10 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-19 255 414
AgabiH97|118430 PF03732 Retrotrans_gag Retrotransposon gag protein 1.9E-07 145 216
PF00098 zf-CCHC Zinc knuckle 1.3E-03 295 311
PF00098 zf-CCHC Zinc knuckle 4.1E-04 323 338
PF13650 Asp_protease_2 Aspartyl protease 1.8E-06 379 469
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.2E-07 381 471
PF08284 RVP_2 Retroviral aspartyl protease 5.4E-09 388 487
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-18 609 768
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-36 834 930
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.6E-38 862 964
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-19 1078 1134
PF00665 rve Integrase core domain 4.4E-10 1152 1248
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.7E-09 1448 1497

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