Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF05000
Short nameRNA_pol_Rpb1_4
Long nameRNA polymerase Rpb1, domain 4
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
AgabiH97|012220 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.8E-111 14 352
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 1.1E-73 354 516
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.4E-52 521 680
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 2.7E-36 706 811
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 2.1E-104 818 1413
PF04992 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 3.4E-67 884 1069
PF04990 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 1.9E-47 1154 1289
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 7.9E-02 1615 1626
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.8E-02 1620 1633
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.3E-01 1627 1640
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 4.6E-02 1634 1647
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.4E-01 1641 1654
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.3E-02 1648 1661
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.0E+00 1655 1668
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 3.4E-02 1662 1673
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 4.7E-02 1669 1682
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 2.7E+00 1684 1696
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 1.7E-01 1697 1710
PF05001 RNA_pol_Rpb1_R RNA polymerase Rpb1 C-terminal repeat 9.7E-02 1711 1722
AgabiH97|069940 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 3.1E-23 10 226
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 2.8E-62 519 709
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 5.6E-36 713 891
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 9.9E-21 954 1042
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 1.3E-87 1049 1697
AgabiH97|076390 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 6.0E-84 11 349
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 4.5E-72 351 516
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.2E-36 519 702
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 9.4E-32 731 833
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 2.5E-81 840 1334

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