© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| PFAM domain | PF00642 |
| Short name | zf-CCCH |
| Long name | Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
| Proteins with at least one of this domain | 13 |
| Total domain count | 16 |
| More information | PFAM website |
| Short name | Long name | E-value | Start | End | Name | ||
|---|---|---|---|---|---|---|---|
| protein ID | PFAM | ||||||
| AgabiH97|007400 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 3.4E-05 | 94 | 113 | |
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 4.0E-05 | 120 | 144 | ||
| PF00098 | zf-CCHC | Zinc knuckle | 5.0E-04 | 254 | 269 | ||
| PF01894 | UPF0047 | Uncharacterised protein family UPF0047 | 2.0E-37 | 315 | 431 | ||
| AgabiH97|011010 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 1.8E-08 | 598 | 624 | |
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 1.8E-07 | 636 | 660 | ||
| AgabiH97|011740 | PF01480 | PWI | PWI domain | 1.3E-09 | 11 | 75 | |
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 4.3E-05 | 201 | 226 | ||
| AgabiH97|029810 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 1.4E-04 | 13 | 32 | |
| PF18044 | zf-CCCH_4 | CCCH-type zinc finger | 1.3E-07 | 13 | 32 | ||
| PF14608 | zf-CCCH_2 | RNA-binding, Nab2-type zinc finger | 9.3E-04 | 14 | 32 | ||
| PF18044 | zf-CCCH_4 | CCCH-type zinc finger | 5.9E-08 | 79 | 100 | ||
| PF14608 | zf-CCCH_2 | RNA-binding, Nab2-type zinc finger | 1.9E-01 | 80 | 99 | ||
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 1.1E-04 | 706 | 739 | ||
| PF01485 | IBR | IBR domain, a half RING-finger domain | 3.8E-09 | 775 | 835 | ||
| PF01485 | IBR | IBR domain, a half RING-finger domain | 3.0E-07 | 851 | 893 | ||
| AgabiH97|041990 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 4.1E-09 | 177 | 202 | |
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 2.1E-07 | 240 | 281 | ||
| AgabiH97|046540 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 2.9E-07 | 14 | 37 | |
| AgabiH97|063870 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 2.0E-06 | 226 | 248 | |
| AgabiH97|076520 | PF08711 | Med26 | TFIIS helical bundle-like domain | 3.0E-08 | 400 | 450 | |
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 1.3E-06 | 909 | 932 | ||
| PF18044 | zf-CCCH_4 | CCCH-type zinc finger | 1.3E-05 | 911 | 932 | ||
| AgabiH97|091870 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 2.4E-05 | 208 | 230 | |
| AgabiH97|093430 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 6.6E-05 | 714 | 736 | |
| AgabiH97|093840 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 2.4E-05 | 44 | 64 | |
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 7.3E-07 | 83 | 136 | ||
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 1.3E-07 | 86 | 132 | ||
| PF13639 | zf-RING_2 | Ring finger domain | 3.0E-06 | 86 | 133 | ||
| AgabiH97|101630 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 5.6E-07 | 251 | 276 | |
| PF18044 | zf-CCCH_4 | CCCH-type zinc finger | 1.6E-06 | 254 | 275 | ||
| AgabiH97|116330 | PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 1.4E-07 | 19 | 41 | |
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 2.7E-07 | 122 | 148 |