Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF00385
Short nameChromo
Long nameChromo (CHRromatin Organisation MOdifier) domain
Proteins with at least one of this domain116
Total domain count116
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
AgabiH97|000000 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.2E-14 267 316
AgabiH97|001780 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|008500 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.1E-12 25 82
AgabiH97|012450 PF17921 Integrase_H2C2 Integrase zinc binding domain 6.3E-11 1 33
PF00665 rve Integrase core domain 4.9E-13 51 147
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-09 347 396
AgabiH97|012780 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.2E-17 234 393
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-37 459 555
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-38 487 589
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 702 759
PF00665 rve Integrase core domain 1.1E-11 777 873
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.9E-09 1073 1122
AgabiH97|012870 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.4E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 850 908
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1222 1271
AgabiH97|012940 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|013050 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|013140 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.2E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|013200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.2E-19 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|013370 PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-11 1 33
PF00665 rve Integrase core domain 4.9E-13 51 147
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.3E-09 347 396
AgabiH97|016300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.4E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 850 908
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1222 1271
AgabiH97|016330 PF00098 zf-CCHC Zinc knuckle 2.1E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 833 994
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1057 1157
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1083 1188
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1302 1360
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1674 1723
AgabiH97|016500 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-36 94 190
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-37 122 224
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.6E-19 340 394
PF00665 rve Integrase core domain 1.0E-10 412 508
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-09 708 757
AgabiH97|018070 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.3E-31 474 574
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-34 500 605
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.1E-20 719 777
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.7E-13 1074 1123
AgabiH97|018360 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|019410 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.3E-23 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-13 1289 1338
AgabiH97|019450 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|020620 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-10 103 152
AgabiH97|023420 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.7E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|023950 PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 346 404
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.3E-14 718 767
AgabiH97|023980 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-14 149 198
AgabiH97|024930 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.0E-06 217 264
AgabiH97|025060 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.2E-11 109 158
AgabiH97|025700 PF00665 rve Integrase core domain 5.3E-08 12 105
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.5E-14 306 355
AgabiH97|026110 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|027180 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-23 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-13 1291 1340
AgabiH97|027810 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.6E-30 674 771
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|028600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|029000 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-14 120 169
AgabiH97|032340 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.7E-20 103 161
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-14 475 524
AgabiH97|032350 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|032380 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.4E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 2.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-37 441 537
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-38 469 571
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.2E-19 685 741
PF00665 rve Integrase core domain 1.0E-10 759 855
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 1055 1104
AgabiH97|035260 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.5E-14 306 355
AgabiH97|035280 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|035310 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-20 3 125
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-30 188 288
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 214 319
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.0E-20 433 491
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 805 854
AgabiH97|035330 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|036560 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 306 355
AgabiH97|037380 PF18723 aGPT-Pplase1 alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1 2.6E-109 136 421
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-11 469 519
AgabiH97|039110 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|039210 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-25 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.7E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.3E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|039280 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|039310 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|039700 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.0E-11 167 216
AgabiH97|039830 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.1E-10 167 216
AgabiH97|039880 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.2E-24 1224 1385
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.9E-30 1448 1548
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.8E-33 1474 1579
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.3E-20 1693 1751
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.3E-13 2065 2114
AgabiH97|041130 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.4E-19 80 136
PF00665 rve Integrase core domain 3.8E-12 154 250
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.1E-09 450 499
AgabiH97|042800 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-15 298 349
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-07 403 550
PF00176 SNF2-rel_dom SNF2-related domain 5.2E-62 405 669
PF00271 Helicase_C Helicase conserved C-terminal domain 8.8E-19 696 806
PF18196 Cdh1_DBD_1 Chromodomain helicase DNA-binding domain 1 1.7E-08 1017 1095
PF13907 DUF4208 Domain of unknown function (DUF4208) 9.9E-24 1296 1390
AgabiH97|044720 PF08284 RVP_2 Retroviral aspartyl protease 3.3E-04 376 476
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.8E-23 835 996
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.3E-08 1059 1102
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-19 1104 1169
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.6E-20 1283 1341
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1655 1704
AgabiH97|044800 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-38 161 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 377 433
PF00665 rve Integrase core domain 4.1E-12 451 547
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.3E-09 747 796
AgabiH97|048800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.6E-22 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|048890 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.2E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 4.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.3E-09 1094 1143
AgabiH97|050360 PF17921 Integrase_H2C2 Integrase zinc binding domain 2.1E-19 119 175
PF00665 rve Integrase core domain 4.0E-12 193 289
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.9E-10 489 538
AgabiH97|051070 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|051190 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.0E-10 220 269
AgabiH97|056630 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.0E-09 7 66
AgabiH97|059920 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.3E-37 133 229
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.2E-29 161 244
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-19 328 384
PF00665 rve Integrase core domain 7.8E-12 402 498
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.1E-07 698 735
AgabiH97|060290 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-31 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.6E-13 1106 1155
AgabiH97|062770 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-23 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.4E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1287 1336
AgabiH97|063990 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 361 522
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.7E-30 585 685
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.9E-34 611 716
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 830 888
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1202 1251
AgabiH97|066170 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|066760 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|068860 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-14 149 198
AgabiH97|069720 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-05 108 195
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 830 991
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1054 1154
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1080 1185
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.6E-20 1299 1357
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1671 1720
AgabiH97|076030 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-32 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.7E-16 1010 1068
AgabiH97|076190 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.7E-29 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-12 1289 1338
AgabiH97|077320 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.2E-14 267 316
AgabiH97|077340 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-24 62 223
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-30 286 386
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-33 312 417
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.4E-20 531 589
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.0E-14 903 952
AgabiH97|077360 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-24 212 373
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-30 436 536
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-33 462 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-20 681 739
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1053 1102
AgabiH97|077380 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|078550 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-19 119 175
PF00665 rve Integrase core domain 4.0E-12 193 289
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-09 489 538
AgabiH97|078640 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-18 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|079530 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.6E-30 454 554
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 480 585
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.1E-20 699 757
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.6E-14 1071 1120
AgabiH97|082260 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.0E-09 178 225
AgabiH97|082280 PF00665 rve Integrase core domain 4.1E-11 25 121
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.6E-07 321 370
AgabiH97|082350 PF00665 rve Integrase core domain 4.1E-11 25 121
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.0E-10 321 370
AgabiH97|082470 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-20 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-28 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-32 516 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.2E-19 735 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|082490 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-14 149 198
AgabiH97|085010 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-29 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.1E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|087590 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-14 120 169
AgabiH97|089430 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|089910 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-23 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|092310 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.5E-14 306 355
AgabiH97|095390 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.0E-10 38 91
PF01393 Chromo_shadow Chromo shadow domain 2.0E-16 182 237
AgabiH97|096330 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.5E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.7E-10 1291 1331
AgabiH97|097630 PF00098 zf-CCHC Zinc knuckle 2.2E-05 381 396
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-24 934 1094
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.1E-30 1158 1258
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 1185 1289
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.7E-20 1403 1461
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.1E-13 1775 1824
AgabiH97|097670 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-08 1 69
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-30 132 232
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.8E-34 158 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-20 377 435
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.2E-13 749 798
AgabiH97|097940 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.4E-30 89 189
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 115 220
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.6E-20 334 392
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.2E-14 706 755
AgabiH97|097960 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.1E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|097980 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|100720 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-15 5 91
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.0E-30 154 251
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 180 285
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.9E-20 399 457
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.8E-14 771 820
AgabiH97|100730 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-24 97 258
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.9E-30 321 421
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 347 452
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.6E-20 566 624
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.4E-14 938 987
AgabiH97|100750 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|100780 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-24 97 258
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.0E-31 321 421
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 347 452
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.6E-20 566 624
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.4E-14 938 987
AgabiH97|106570 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-24 834 995
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.8E-30 1058 1158
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1084 1189
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1303 1361
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.3E-13 1675 1724
AgabiH97|107050 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|107890 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH97|107910 PF17921 Integrase_H2C2 Integrase zinc binding domain 9.1E-18 119 175
PF00665 rve Integrase core domain 3.6E-13 192 289
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.1E-09 489 538
AgabiH97|108230 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-09 266 315
AgabiH97|110090 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-22 495 656
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.1E-21 729 805
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 731 836
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.8E-20 950 1008
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1238 1287
AgabiH97|110140 PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-20 1 68
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.0E-20 182 240
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.8E-14 554 603
AgabiH97|110160 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH97|110200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|110240 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH97|110410 PF00628 PHD PHD-finger 8.9E-08 1428 1467
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.7E-06 1513 1564
AgabiH97|113110 PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-14 120 169
AgabiH97|113160 PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-30 280 380
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.3E-33 306 411
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.4E-20 525 583
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 897 946
AgabiH97|117650 PF00098 zf-CCHC Zinc knuckle 2.0E-05 262 277
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-24 790 951
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-29 1014 1114
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-33 1040 1145
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.5E-20 1259 1317
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.9E-13 1631 1680
AgabiH97|117660 PF00665 rve Integrase core domain 2.1E-10 5 81
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-10 281 330
AgabiH97|117670 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.7E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.5E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-06 1010 1046
AgabiH97|117740 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-27 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.8E-14 1010 1059
AgabiH97|117810 PF00098 zf-CCHC Zinc knuckle 2.0E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-24 809 970
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 1033 1133
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.5E-33 1059 1164
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.0E-20 1278 1336
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1626 1675
AgabiH97|118340 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.1E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-15 1010 1068
AgabiH97|118430 PF03732 Retrotrans_gag Retrotransposon gag protein 1.9E-07 145 216
PF00098 zf-CCHC Zinc knuckle 1.3E-03 295 311
PF00098 zf-CCHC Zinc knuckle 4.1E-04 323 338
PF13650 Asp_protease_2 Aspartyl protease 1.8E-06 379 469
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.2E-07 381 471
PF08284 RVP_2 Retroviral aspartyl protease 5.4E-09 388 487
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-18 609 768
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-36 834 930
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.6E-38 862 964
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.4E-19 1078 1134
PF00665 rve Integrase core domain 4.4E-10 1152 1248
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.7E-09 1448 1497
AgabiH97|119090 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.4E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.9E-19 639 695
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.4E-13 1009 1058
AgabiH97|119620 PF17921 Integrase_H2C2 Integrase zinc binding domain 1.7E-20 103 161
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-14 475 524

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