Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00270
Short nameDEAD
Long nameDEAD/DEAH box helicase
Proteins with at least one of this domain57
Total domain count60
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
AgabiH97|004600 PF00270 DEAD DEAD/DEAH box helicase 1.8E-11 561 711
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-12 794 921
PF04408 HA2 Helicase associated domain (HA2) 2.9E-17 987 1067
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 1.8E-13 1148 1248
AgabiH97|005360 PF17911 Ski2_N Ski2 N-terminal region 1.2E-29 61 179
PF00270 DEAD DEAD/DEAH box helicase 3.9E-18 280 428
PF04851 ResIII Type III restriction enzyme, res subunit 2.3E-05 292 426
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-05 623 702
PF13234 rRNA_proc-arch rRNA-processing arch domain 5.1E-29 757 1033
PF08148 DSHCT DSHCT (NUC185) domain 2.8E-50 1059 1226
AgabiH97|006000 PF04851 ResIII Type III restriction enzyme, res subunit 2.6E-18 30 203
PF00270 DEAD DEAD/DEAH box helicase 4.0E-14 33 203
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-15 284 381
AgabiH97|006500 PF00035 dsrm Double-stranded RNA binding motif 1.7E-04 247 308
PF00270 DEAD DEAD/DEAH box helicase 4.1E-07 425 590
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-14 692 823
PF04408 HA2 Helicase associated domain (HA2) 1.2E-16 889 962
AgabiH97|006690 PF00270 DEAD DEAD/DEAH box helicase 9.6E-49 218 390
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-27 432 536
AgabiH97|007710 PF00270 DEAD DEAD/DEAH box helicase 6.0E-06 641 805
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-15 925 1049
PF04408 HA2 Helicase associated domain (HA2) 9.7E-15 1117 1194
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 9.4E-10 1295 1376
AgabiH97|009090 PF00270 DEAD DEAD/DEAH box helicase 9.2E-37 81 248
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-08 96 244
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-25 288 395
AgabiH97|009110 PF00270 DEAD DEAD/DEAH box helicase 4.6E-34 138 312
PF04851 ResIII Type III restriction enzyme, res subunit 2.7E-06 152 306
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-23 362 458
AgabiH97|009620 PF00270 DEAD DEAD/DEAH box helicase 5.9E-17 89 249
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-06 510 559
AgabiH97|011460 PF00270 DEAD DEAD/DEAH box helicase 6.8E-45 94 266
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-23 308 412
PF13959 DUF4217 Domain of unknown function (DUF4217) 2.9E-17 452 512
AgabiH97|011560 PF00270 DEAD DEAD/DEAH box helicase 1.6E-17 211 370
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-19 222 367
PF00271 Helicase_C Helicase conserved C-terminal domain 1.9E-18 578 682
AgabiH97|011800 PF00270 DEAD DEAD/DEAH box helicase 6.2E-47 249 429
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-29 485 584
AgabiH97|012020 PF00270 DEAD DEAD/DEAH box helicase 1.4E-08 564 712
PF00271 Helicase_C Helicase conserved C-terminal domain 8.3E-12 754 884
PF04408 HA2 Helicase associated domain (HA2) 7.1E-21 947 1034
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 2.6E-14 1092 1168
AgabiH97|015300 PF00270 DEAD DEAD/DEAH box helicase 8.9E-15 194 361
PF00271 Helicase_C Helicase conserved C-terminal domain 4.6E-12 420 525
PF16124 RecQ_Zn_bind RecQ zinc-binding 2.3E-10 538 608
AgabiH97|015590 PF00270 DEAD DEAD/DEAH box helicase 5.3E-34 111 322
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-16 380 486
AgabiH97|016610 PF00270 DEAD DEAD/DEAH box helicase 2.9E-18 35 199
PF00271 Helicase_C Helicase conserved C-terminal domain 6.6E-15 258 358
AgabiH97|016810 PF00270 DEAD DEAD/DEAH box helicase 6.3E-06 11 135
PF00271 Helicase_C Helicase conserved C-terminal domain 4.7E-14 190 290
AgabiH97|020090 PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-14 16 190
PF00270 DEAD DEAD/DEAH box helicase 1.3E-13 18 151
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-15 382 514
PF03368 Dicer_dimer Dicer dimerisation domain 3.1E-23 588 694
PF00636 Ribonuclease_3 Ribonuclease III domain 1.1E-18 1031 1169
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 9.1E-12 1224 1296
PF00636 Ribonuclease_3 Ribonuclease III domain 3.7E-17 1246 1392
AgabiH97|026170 PF00270 DEAD DEAD/DEAH box helicase 2.7E-08 65 215
PF00271 Helicase_C Helicase conserved C-terminal domain 5.4E-09 267 404
PF04408 HA2 Helicase associated domain (HA2) 3.9E-20 467 554
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 5.3E-18 616 690
AgabiH97|026690 PF00270 DEAD DEAD/DEAH box helicase 1.1E-06 131 265
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-08 317 454
AgabiH97|027460 PF00270 DEAD DEAD/DEAH box helicase 1.6E-20 32 199
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-12 259 358
AgabiH97|028650 PF00270 DEAD DEAD/DEAH box helicase 7.9E-17 144 291
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-06 435 540
PF13234 rRNA_proc-arch rRNA-processing arch domain 2.2E-88 594 864
PF08148 DSHCT DSHCT (NUC185) domain 4.2E-51 892 1056
AgabiH97|033060 PF00270 DEAD DEAD/DEAH box helicase 1.4E-21 188 470
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-10 539 676
AgabiH97|033470 PF00270 DEAD DEAD/DEAH box helicase 1.6E-21 32 199
PF00271 Helicase_C Helicase conserved C-terminal domain 5.4E-11 259 357
AgabiH97|042540 PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-05 148 321
PF00270 DEAD DEAD/DEAH box helicase 2.0E-39 150 374
PF00271 Helicase_C Helicase conserved C-terminal domain 7.4E-17 518 600
PF13959 DUF4217 Domain of unknown function (DUF4217) 3.7E-19 666 727
AgabiH97|044400 PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-11 337 510
PF00176 SNF2-rel_dom SNF2-related domain 1.9E-57 340 626
PF00270 DEAD DEAD/DEAH box helicase 5.8E-07 359 514
PF00271 Helicase_C Helicase conserved C-terminal domain 2.4E-14 689 799
AgabiH97|046310 PF00270 DEAD DEAD/DEAH box helicase 1.2E-38 122 309
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-22 392 487
PF08147 DBP10CT DBP10CT (NUC160) domain 3.8E-19 748 809
AgabiH97|048630 PF00270 DEAD DEAD/DEAH box helicase 1.0E-26 49 168
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-30 207 312
AgabiH97|052830 PF00270 DEAD DEAD/DEAH box helicase 1.5E-45 48 211
PF04851 ResIII Type III restriction enzyme, res subunit 3.9E-06 61 206
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-31 249 357
AgabiH97|056060 PF00270 DEAD DEAD/DEAH box helicase 8.5E-24 191 359
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-09 199 356
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-09 425 559
PF02889 Sec63 Sec63 Brl domain 1.0E-29 678 992
AgabiH97|058180 PF00270 DEAD DEAD/DEAH box helicase 4.8E-46 308 505
PF00271 Helicase_C Helicase conserved C-terminal domain 6.4E-29 541 650
AgabiH97|059280 PF08839 CDT1 DNA replication factor CDT1 like 2.7E-06 10 71
PF04851 ResIII Type III restriction enzyme, res subunit 6.8E-07 263 435
PF00270 DEAD DEAD/DEAH box helicase 6.3E-22 265 437
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-14 499 606
PF09369 MZB MrfA Zn-binding domain 7.9E-15 869 950
AgabiH97|059710 PF00270 DEAD DEAD/DEAH box helicase 1.6E-44 202 382
PF04851 ResIII Type III restriction enzyme, res subunit 4.2E-05 222 377
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-25 418 525
AgabiH97|059730 PF00270 DEAD DEAD/DEAH box helicase 1.2E-18 289 453
PF00271 Helicase_C Helicase conserved C-terminal domain 5.2E-18 496 601
PF16124 RecQ_Zn_bind RecQ zinc-binding 5.1E-13 615 684
PF09382 RQC RQC domain 1.2E-13 688 797
AgabiH97|060690 PF00270 DEAD DEAD/DEAH box helicase 4.6E-06 56 200
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-12 250 376
PF04408 HA2 Helicase associated domain (HA2) 1.7E-14 438 527
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 3.3E-11 585 661
PF07956 DUF1690 Protein of Unknown function (DUF1690) 1.6E-38 682 835
AgabiH97|062200 PF00270 DEAD DEAD/DEAH box helicase 2.4E-47 41 208
PF04851 ResIII Type III restriction enzyme, res subunit 8.4E-06 57 201
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-30 242 351
AgabiH97|062230 PF04851 ResIII Type III restriction enzyme, res subunit 5.8E-15 15 180
PF00270 DEAD DEAD/DEAH box helicase 6.5E-16 18 157
PF00271 Helicase_C Helicase conserved C-terminal domain 3.3E-16 360 480
PF03368 Dicer_dimer Dicer dimerisation domain 4.0E-13 564 648
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 3.3E-09 981 1096
PF00636 Ribonuclease_3 Ribonuclease III domain 4.0E-20 983 1093
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 4.6E-15 1145 1281
PF00636 Ribonuclease_3 Ribonuclease III domain 2.9E-18 1167 1279
AgabiH97|062600 PF00270 DEAD DEAD/DEAH box helicase 8.0E-16 35 199
PF00271 Helicase_C Helicase conserved C-terminal domain 6.6E-15 258 358
AgabiH97|069860 PF00270 DEAD DEAD/DEAH box helicase 4.4E-43 48 210
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-31 249 357
AgabiH97|070010 PF00270 DEAD DEAD/DEAH box helicase 3.1E-22 11 157
PF00271 Helicase_C Helicase conserved C-terminal domain 4.6E-21 210 329
PF13959 DUF4217 Domain of unknown function (DUF4217) 5.0E-19 392 445
AgabiH97|071510 PF00270 DEAD DEAD/DEAH box helicase 7.8E-25 270 452
PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-10 282 451
PF02889 Sec63 Sec63 Brl domain 1.4E-75 779 1081
PF00270 DEAD DEAD/DEAH box helicase 1.2E-06 1128 1268
AgabiH97|071590 PF00270 DEAD DEAD/DEAH box helicase 6.8E-40 296 442
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-21 477 578
AgabiH97|073420 PF00270 DEAD DEAD/DEAH box helicase 1.2E-42 132 298
PF00271 Helicase_C Helicase conserved C-terminal domain 5.9E-25 389 486
AgabiH97|073460 PF00270 DEAD DEAD/DEAH box helicase 1.0E-17 452 676
PF00271 Helicase_C Helicase conserved C-terminal domain 4.9E-08 759 867
AgabiH97|080570 PF00270 DEAD DEAD/DEAH box helicase 3.2E-36 91 257
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-25 298 413
AgabiH97|082540 PF00270 DEAD DEAD/DEAH box helicase 2.5E-50 123 294
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-05 139 287
PF00271 Helicase_C Helicase conserved C-terminal domain 4.9E-30 331 440
AgabiH97|082880 PF00270 DEAD DEAD/DEAH box helicase 1.7E-38 195 416
PF04851 ResIII Type III restriction enzyme, res subunit 4.8E-08 206 343
PF00271 Helicase_C Helicase conserved C-terminal domain 5.9E-21 470 586
AgabiH97|088320 PF18149 Helicase_PWI N-terminal helicase PWI domain 3.2E-35 279 385
PF00270 DEAD DEAD/DEAH box helicase 7.6E-27 498 674
PF04851 ResIII Type III restriction enzyme, res subunit 1.7E-15 510 672
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-08 730 874
PF02889 Sec63 Sec63 Brl domain 6.9E-90 996 1300
PF00270 DEAD DEAD/DEAH box helicase 2.2E-21 1345 1506
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-06 1348 1472
PF02889 Sec63 Sec63 Brl domain 2.0E-65 1830 2141
AgabiH97|094920 PF00270 DEAD DEAD/DEAH box helicase 1.3E-39 38 224
PF04851 ResIII Type III restriction enzyme, res subunit 3.3E-05 50 184
PF00271 Helicase_C Helicase conserved C-terminal domain 8.6E-28 260 468
AgabiH97|095560 PF00270 DEAD DEAD/DEAH box helicase 3.1E-46 190 375
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-29 412 523
AgabiH97|099290 PF00270 DEAD DEAD/DEAH box helicase 3.7E-07 116 277
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-13 322 449
PF04408 HA2 Helicase associated domain (HA2) 8.2E-20 510 598
AgabiH97|102200 PF00270 DEAD DEAD/DEAH box helicase 1.1E-05 469 619
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-14 666 793
PF04408 HA2 Helicase associated domain (HA2) 5.3E-22 855 944
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 4.9E-19 1004 1084
AgabiH97|104310 PF00270 DEAD DEAD/DEAH box helicase 3.5E-18 25 190
PF00271 Helicase_C Helicase conserved C-terminal domain 5.3E-17 240 350
PF16124 RecQ_Zn_bind RecQ zinc-binding 3.2E-09 390 443
AgabiH97|104560 PF00270 DEAD DEAD/DEAH box helicase 9.7E-20 34 199
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 51 165
PF00271 Helicase_C Helicase conserved C-terminal domain 2.4E-14 256 358
AgabiH97|110770 PF03937 Sdh5 Flavinator of succinate dehydrogenase 4.1E-09 1 40
PF00270 DEAD DEAD/DEAH box helicase 6.7E-42 124 287
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-26 325 431
AgabiH97|110790 PF00270 DEAD DEAD/DEAH box helicase 2.8E-19 139 218
PF00270 DEAD DEAD/DEAH box helicase 2.4E-17 262 385
PF00271 Helicase_C Helicase conserved C-terminal domain 7.1E-27 452 558
AgabiH97|116560 PF00270 DEAD DEAD/DEAH box helicase 3.2E-47 78 248
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-23 289 398
PF13959 DUF4217 Domain of unknown function (DUF4217) 9.8E-22 440 500
PF13347 MFS_2 MFS/sugar transport protein 2.3E-07 885 1193

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