Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|539400
Gene name
Locationscaffold_13:312017..312393
Strand+
Gene length (bp)376
Transcript length (bp)327
Coding sequence length (bp)327
Protein length (aa) 109

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup1245
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|019720
Agaricus bisporus var bisporus H39 AgabiH39|019730
Agaricus bisporus var bisporus H39 AgabiH39|019740
Agaricus bisporus var bisporus H39 AgabiH39|019750
Agaricus bisporus var bisporus H39 AgabiH39|019950
Agaricus bisporus var bisporus H39 AgabiH39|020020
Agaricus bisporus var bisporus H39 AgabiH39|479900
Agaricus bisporus var bisporus H39 AgabiH39|539400 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|019720
Agaricus bisporus var bisporus H97 AgabiH97|019730
Agaricus bisporus var bisporus H97 AgabiH97|019740
Agaricus bisporus var bisporus H97 AgabiH97|019750
Agaricus bisporus var bisporus H97 AgabiH97|019950
Agaricus bisporus var bisporus H97 AgabiH97|020020
Agaricus bisporus var bisporus H97 AgabiH97|020210
Agaricus bisporus var bisporus H97 AgabiH97|034710

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|539400
MQLAKRIFIDSAMMYTLASLSVFVSQICQSVAVDITFQAQIQITAIAFNLILIRPGPGEDQENELCARCCKPETN
GSKVSVAVGTTDSSVDIPLFDTSKGLRRASVVE*
Coding >AgabiH39|539400
ATGCAGCTTGCCAAACGTATATTCATCGATTCGGCTATGATGTATACGTTGGCATCTTTGAGTGTTTTTGTCAGC
CAAATTTGCCAGAGCGTCGCGGTGGATATTACATTTCAAGCACAAATTCAGATTACCGCGATTGCCTTCAATCTG
ATACTTATCCGACCGGGTCCAGGCGAGGACCAAGAAAACGAGTTATGCGCCAGATGTTGTAAACCGGAGACAAAC
GGGTCGAAAGTTAGCGTGGCAGTAGGGACCACGGACTCCTCGGTGGATATACCGTTATTCGACACTTCAAAAGGG
CTTCGTCGAGCGTCAGTGGTGGAATAA
Transcript >AgabiH39|539400
ATGCAGCTTGCCAAACGTATATTCATCGATTCGGCTATGATGTATACGTTGGCATCTTTGAGTGTTTTTGTCAGC
CAAATTTGCCAGAGCGTCGCGGTGGATATTACATTTCAAGCACAAATTCAGATTACCGCGATTGCCTTCAATCTG
ATACTTATCCGACCGGGTCCAGGCGAGGACCAAGAAAACGAGTTATGCGCCAGATGTTGTAAACCGGAGACAAAC
GGGTCGAAAGTTAGCGTGGCAGTAGGGACCACGGACTCCTCGGTGGATATACCGTTATTCGACACTTCAAAAGGG
CTTCGTCGAGCGTCAGTGGTGGAATAA
Gene >AgabiH39|539400
ATGCAGCTTGCCAAACGTATATTCATCGATTCGGCTATGATGTATACGTTGGCATCTTTGAGTGTTTTTGTCAGC
CAAATTTGCCAGAGCGTCGCGGTGGATATTACATTTCAAGCAGTAGGTCAGCCGAATTTAGGACCGATCAATTTC
TTATTATGTTGCATAGCAAATTCAGATTACCGCGATTGCCTTCAATCTGATACTTATCCGACCGGGTCCAGGCGA
GGACCAAGAAAACGAGTTATGCGCCAGATGTTGTAAACCGGAGACAAACGGGTCGAAAGTTAGCGTGGCAGTAGG
GACCACGGACTCCTCGGTGGATATACCGTTATTCGACACTTCAAAAGGGCTTCGTCGAGCGTCAGTGGTGGAATA
A

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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