Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|406100
Gene name
Locationscaffold_07:1505912..1507842
Strand+
Gene length (bp)1930
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 1.1E-17 164 247

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 46 68 22
3 83 105 22
4 118 140 22
5 155 177 22
6 197 219 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|406100
MANPAQIAHGPMFIGFMFNIFLFGVMTTQVYIYYTNFPRDRWWMKFFVLLIFILDAINSVFNAIYLYDTLILRFG
DMEVIRTANWLFATEPAFVGVVAALVQLFFSWRVKVLTKNYILSAIVALGAVIGGVCGVVTAWEVMQTPHFIEFR
NFKVVVIIWLVTASLVDVLITSALVWYLVRETSYAPRNLMIDRIIRLTVQTGLVTSVLATTDLIVYLVDASGNHL
IFNYPLGKVYSNSLMSSLNSRKGWGYSSEANDCDDVVSDSGVKTTDLPRISTEAESERGKSSTSIASRLRAQSIS
LSHGAMEITNGLFSRRPKKRTAPEVHVRIDSLESRDFSPQLHWSTHADPEDTSKTGCDPLKDEKKTIVPARN*
Coding >AgabiH39|406100
ATGGCAAATCCGGCACAAATCGCACATGGACCTATGTTCATCGGATTTATGTTCAATATCTTCCTCTTCGGCGTG
ATGACGACTCAGGTTTACATCTATTATACAAATTTTCCCAGGGACCGCTGGTGGATGAAGTTTTTCGTACTCCTT
ATCTTCATCCTTGACGCAATCAATTCCGTATTTAACGCCATATATCTATACGACACTCTCATCCTTCGGTTCGGT
GATATGGAAGTTATCAGGACGGCCAACTGGTTATTTGCTACAGAACCTGCCTTCGTCGGGGTAGTAGCTGCTCTA
GTTCAGCTATTTTTTTCATGGCGTGTTAAAGTCTTGACCAAAAATTACATCTTGAGCGCGATTGTAGCTTTGGGT
GCTGTGATTGGTGGAGTCTGCGGTGTCGTCACTGCATGGGAGGTTATGCAAACTCCCCACTTCATAGAATTCCGA
AACTTCAAAGTAGTTGTTATCATTTGGCTGGTCACAGCAAGCTTGGTCGATGTGCTTATCACCTCGGCTTTAGTA
TGGTATCTGGTACGCGAAACCTCTTACGCTCCTCGCAACCTCATGATTGACCGCATCATCAGACTCACTGTCCAG
ACTGGGCTCGTCACCTCGGTCTTAGCCACTACCGACTTGATTGTTTATCTCGTAGACGCTTCGGGAAATCATCTC
ATCTTCAACTATCCGCTCGGCAAAGTATATAGCAATTCCCTTATGAGTAGCCTTAACTCCCGCAAAGGCTGGGGA
TACTCCTCCGAAGCAAATGATTGCGATGATGTGGTTAGCGACTCGGGGGTCAAAACTACGGACTTACCCCGAATT
TCGACGGAGGCTGAAAGTGAACGAGGGAAATCGTCCACCAGCATTGCCAGTCGTCTCCGCGCTCAGAGTATAAGT
CTTTCTCATGGAGCCATGGAGATCACCAACGGTCTTTTCAGCAGACGACCCAAGAAAAGGACCGCACCCGAAGTC
CATGTTCGCATTGACTCTCTCGAATCCCGAGACTTTTCACCTCAATTACACTGGTCAACCCACGCTGACCCCGAG
GACACCTCTAAAACGGGGTGCGACCCGCTCAAAGACGAAAAAAAGACTATTGTTCCGGCACGCAATTGA
Transcript >AgabiH39|406100
ATGGCAAATCCGGCACAAATCGCACATGGACCTATGTTCATCGGATTTATGTTCAATATCTTCCTCTTCGGCGTG
ATGACGACTCAGGTTTACATCTATTATACAAATTTTCCCAGGGACCGCTGGTGGATGAAGTTTTTCGTACTCCTT
ATCTTCATCCTTGACGCAATCAATTCCGTATTTAACGCCATATATCTATACGACACTCTCATCCTTCGGTTCGGT
GATATGGAAGTTATCAGGACGGCCAACTGGTTATTTGCTACAGAACCTGCCTTCGTCGGGGTAGTAGCTGCTCTA
GTTCAGCTATTTTTTTCATGGCGTGTTAAAGTCTTGACCAAAAATTACATCTTGAGCGCGATTGTAGCTTTGGGT
GCTGTGATTGGTGGAGTCTGCGGTGTCGTCACTGCATGGGAGGTTATGCAAACTCCCCACTTCATAGAATTCCGA
AACTTCAAAGTAGTTGTTATCATTTGGCTGGTCACAGCAAGCTTGGTCGATGTGCTTATCACCTCGGCTTTAGTA
TGGTATCTGGTACGCGAAACCTCTTACGCTCCTCGCAACCTCATGATTGACCGCATCATCAGACTCACTGTCCAG
ACTGGGCTCGTCACCTCGGTCTTAGCCACTACCGACTTGATTGTTTATCTCGTAGACGCTTCGGGAAATCATCTC
ATCTTCAACTATCCGCTCGGCAAAGTATATAGCAATTCCCTTATGAGTAGCCTTAACTCCCGCAAAGGCTGGGGA
TACTCCTCCGAAGCAAATGATTGCGATGATGTGGTTAGCGACTCGGGGGTCAAAACTACGGACTTACCCCGAATT
TCGACGGAGGCTGAAAGTGAACGAGGGAAATCGTCCACCAGCATTGCCAGTCGTCTCCGCGCTCAGAGTATAAGT
CTTTCTCATGGAGCCATGGAGATCACCAACGGTCTTTTCAGCAGACGACCCAAGAAAAGGACCGCACCCGAAGTC
CATGTTCGCATTGACTCTCTCGAATCCCGAGACTTTTCACCTCAATTACACTGGTCAACCCACGCTGACCCCGAG
GACACCTCTAAAACGGGGTGCGACCCGCTCAAAGACGAAAAAAAGACTATTGTTCCGGCACGCAATTGA
Gene >AgabiH39|406100
ATGGCAAATCCGGCACAAATCGCGTAGGTCGCCATCCCCCTCGACATCAAGCGGATAGTTTTCTGACTGCTAGAA
ATAGACATGGACCTATGTTCATCGGATTTATGTTCAATATCTTCCTCTTCGGCGTGATGACGACTCAGGTTTACA
TCTATTATACAAATTTTCCCAGGTACGTCGTCACCGTGTCAATCATCACTTTCCAGACTCACGCGTATTATAGGG
ACCGCTGGTGGATGAAGTTTTTCGTAAGGTCTTGCAAAGGTTACAATATGAAACAAACTGACTTCGTATGGACAG
GTACTCCTTATCTTCATCCTTGACGCAATCAATTCCGTATTTAACGCCATATATCTATACGACACTCTCATCCTT
CGGTTCGGTAAATGCGGTGTAACACATATTTTGTTTCATTTCAAGCTGACAGGATACCTAGGTGATATGGAAGTT
ATCAGGACGGCCAACTGGTGTTAGTTATTTCATTCTTTTCTTTCTGCTGCTCTCTCAATCTAGCTGAAGTATTTG
CTACAGGTTTCGCGCGTCCTGTTCACACCTGGTATATGTGACTGATTTGTCTCCTCTGTATCAGAACCTGCCTTC
GTCGTGAGTCCTGTGTCCACCTTTATGCGATTATCAATATCAAGTATCTCTCATGATAGGGGGTAGTAGCTGCTC
TAGTTCAGCTATTTTTTTCATGGCGTGTTAAAGTCTTGACCAAAAATTACATCTTGAGCGCGATTGTAGCTTTGG
GTGCTGTGATTGGTGGAGGTAAGCAAGGGTCCGCTATCCTCTTTTGTCTTTCTGATTTTCATTTTCAGTCTGCGG
TGTCGTCACTGCATGGGAGGTTATGCAAACTCCCCACTTCATAGAATTCCGAAACTTCAAAGTTAGTTATAGACA
TAACTTATGCATTTCCTTTTATTGACTAACGTTCTGATAGGTAGTTGTTATCATTTGGCTGGTCACAGCAAGCTT
GGTCGATGTGCTTATCACCTCGGCTTTAGTATGGTATCTGTGCGTTTTCTTTTCACGTGTATATGACAGTTCCAT
CCTCATCTTATATAACAAGGGTACGCGAAACCTCTTACGCTCCTCGCAGTCTTCCCCATTCTCCCTTAGAGAAGA
CACAAAACCGGTTTCAGGCGTTCAGACCTCATGATTGACCGCATCATCAGACGTTAGTCGACTCTTTTTTTCTTT
TCAAACTTTCGTTTCTTTTTGCCTGAACTTGTTTCTTTAGTCACTGTCCAGACTGGGCTCGTCACCTCGGTCTTA
GCCACTACCGACTTGATTGTTTATCTCGTAGACGTAAGCAAATACCGAATTTTCCGATTAAGACGATCTAACCTT
GTATACAGGCTTCGGGAAAGTGGGTATGGTTGAGCTTCATGAAGTGACTTACTGAAAAAATCCTAGTCATCTCAT
CTTCAACTATCCGCTCGGCAAAGTATATAGCAATTCCCTTATGAGTAGCCTTAACTCCCGCAAAGGCTGGGGATA
CTCCTCCGAAGCAAATGATTGCGATGATGTGGTTAGCGACTCGGGGGTCAAAACTACGGACTTACCCCGAATTTC
GACGGAGGCTGAAAGTGAACGAGGGAAATCGTCCACCAGCATTGCCAGTCGTCTCCGCGCTCAGAGTATAAGTCT
TTCTCATGGAGCCATGGAGATCACCGTGAGTGACTTGCTCAGCCACAGTACGCGAGGAACAGAATCTTACATTAT
GTGATTATCGTAGAACGGTCTTTTCAGCAGACGACCCAAGAAAAGGACCGCACCCGAAGTCCATGTTCGCATTGA
CTCTCTCGAATCCCGAGACTTTTCACCTCAATTACACTGGTCAACCCACGCTGACCCCGAGGACACCTCTAAAAC
GGGGTGCGACCCGCTCAAAGACGAAAAAAAGACTATTGTTCCGGCACGCAATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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