Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|387000
Gene name
Locationscaffold_06b:659562..660615
Strand+
Gene length (bp)1053
Transcript length (bp)876
Coding sequence length (bp)876
Protein length (aa) 292

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13489 Methyltransf_23 Methyltransferase domain 1.6E-06 42 207

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup288
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|023670
Agaricus bisporus var bisporus H39 AgabiH39|030510
Agaricus bisporus var bisporus H39 AgabiH39|062930
Agaricus bisporus var bisporus H39 AgabiH39|062940
Agaricus bisporus var bisporus H39 AgabiH39|062950
Agaricus bisporus var bisporus H39 AgabiH39|062970
Agaricus bisporus var bisporus H39 AgabiH39|062990
Agaricus bisporus var bisporus H39 AgabiH39|069420
Agaricus bisporus var bisporus H39 AgabiH39|294900
Agaricus bisporus var bisporus H39 AgabiH39|387000 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|069430
Agaricus bisporus var bisporus H97 AgabiH97|069420
Agaricus bisporus var bisporus H97 AgabiH97|062990
Agaricus bisporus var bisporus H97 AgabiH97|062970
Agaricus bisporus var bisporus H97 AgabiH97|062960
Agaricus bisporus var bisporus H97 AgabiH97|023670
Agaricus bisporus var bisporus H97 AgabiH97|062940
Agaricus bisporus var bisporus H97 AgabiH97|062930
Agaricus bisporus var bisporus H97 AgabiH97|030510
Agaricus bisporus var bisporus H97 AgabiH97|096710
Agaricus bisporus var bisporus H97 AgabiH97|062950
Rhodonia placenta FPRL280 RhoplFPRL280|71_4

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|387000
MTSTVANAPITHQKPLPEATYLLPTTESERIRFDTQHQSITRAFGDKLVLSPVILTKGDKVLDSGAGSCSWLLDF
ATTLTPDIELYASDVETRLFPINPPKNVKLWKASSVDLPIEWSNAFQLVHQRLLISALTSKDWPLAVNELFRVTK
PGGWVELCEAGAEIDCPSHPNHRALTAARIAYEASDHVIQAAMLLPQWLKDAGFVKIQSVEGKYPIGKWAGSDGE
HARHGLIGFLRALKAPILTKGGLGFAESEEEYDAIIDDFERICDNTPNTIGRNYTIYAHKPVQIVS*
Coding >AgabiH39|387000
ATGACATCGACCGTCGCCAACGCACCGATAACACACCAGAAGCCATTGCCTGAAGCCACGTACCTCCTTCCCACA
ACTGAGTCGGAGCGCATCAGGTTTGATACCCAGCATCAAAGTATAACACGCGCTTTCGGTGACAAACTTGTCCTT
TCTCCAGTGATCCTCACAAAAGGCGACAAAGTGCTCGACTCCGGGGCAGGATCCTGCAGCTGGCTTCTTGATTTC
GCGACGACCTTGACGCCAGACATTGAACTTTACGCTTCGGATGTCGAAACTCGACTCTTTCCCATCAATCCTCCA
AAGAACGTTAAACTATGGAAGGCATCCTCAGTGGACCTTCCTATAGAATGGTCCAATGCATTCCAATTGGTCCAT
CAACGCCTTCTCATTAGTGCGCTCACATCAAAGGATTGGCCTTTAGCGGTGAACGAGCTCTTTCGCGTCACAAAG
CCTGGCGGCTGGGTAGAACTCTGTGAAGCTGGTGCAGAAATTGATTGCCCCTCTCATCCAAACCACAGGGCGCTC
ACAGCTGCGCGAATCGCATACGAAGCAAGTGACCACGTTATCCAAGCCGCCATGTTGTTGCCTCAATGGTTGAAA
GACGCTGGTTTCGTTAAAATCCAATCCGTGGAGGGAAAGTACCCCATAGGAAAGTGGGCCGGATCTGACGGAGAA
CATGCTCGTCATGGACTAATTGGATTTTTGAGGGCCCTCAAGGCGCCTATTTTGACCAAAGGAGGTTTAGGATTC
GCAGAGTCCGAAGAAGAATATGATGCCATTATTGATGATTTTGAACGAATTTGTGACAATACGCCGAATACGATT
GGGAGGAATTACACTATATACGCCCATAAACCTGTGCAAATTGTATCATGA
Transcript >AgabiH39|387000
ATGACATCGACCGTCGCCAACGCACCGATAACACACCAGAAGCCATTGCCTGAAGCCACGTACCTCCTTCCCACA
ACTGAGTCGGAGCGCATCAGGTTTGATACCCAGCATCAAAGTATAACACGCGCTTTCGGTGACAAACTTGTCCTT
TCTCCAGTGATCCTCACAAAAGGCGACAAAGTGCTCGACTCCGGGGCAGGATCCTGCAGCTGGCTTCTTGATTTC
GCGACGACCTTGACGCCAGACATTGAACTTTACGCTTCGGATGTCGAAACTCGACTCTTTCCCATCAATCCTCCA
AAGAACGTTAAACTATGGAAGGCATCCTCAGTGGACCTTCCTATAGAATGGTCCAATGCATTCCAATTGGTCCAT
CAACGCCTTCTCATTAGTGCGCTCACATCAAAGGATTGGCCTTTAGCGGTGAACGAGCTCTTTCGCGTCACAAAG
CCTGGCGGCTGGGTAGAACTCTGTGAAGCTGGTGCAGAAATTGATTGCCCCTCTCATCCAAACCACAGGGCGCTC
ACAGCTGCGCGAATCGCATACGAAGCAAGTGACCACGTTATCCAAGCCGCCATGTTGTTGCCTCAATGGTTGAAA
GACGCTGGTTTCGTTAAAATCCAATCCGTGGAGGGAAAGTACCCCATAGGAAAGTGGGCCGGATCTGACGGAGAA
CATGCTCGTCATGGACTAATTGGATTTTTGAGGGCCCTCAAGGCGCCTATTTTGACCAAAGGAGGTTTAGGATTC
GCAGAGTCCGAAGAAGAATATGATGCCATTATTGATGATTTTGAACGAATTTGTGACAATACGCCGAATACGATT
GGGAGGAATTACACTATATACGCCCATAAACCTGTGCAAATTGTATCATGA
Gene >AgabiH39|387000
ATGACATCGACCGTCGCCAACGCACCGATAACACACCAGAAGCCATTGCCTGAAGCCACGTACCTCCTTCCCACA
ACTGAGTCGGAGCGCATCAGGTGGGTGGTGAGACATACAGCTCAGCAGCTGTGCTGAAAATCCTCCACTGTGCCG
GTAGGTTTGATACCCAGCATCAAAGTATAACACGCGCTTTCGGTGACAAACTTGTCCTTTCTCCAGTGATCCTCA
CAAAAGGCGACAAAGTGCTCGACTCCGGGGCAGGATCCTGTATGTGTTTCAATCGTCCGAAGCAACCATTTTTTT
TTGACCAGTTCGCGATGCAGGCAGCTGGCTTCTTGATTTCGCGACGACCTTGACGCCAGACATTGAACTTTACGC
TTCGGATGTCGAAACTCGACTCTTTCCCATCAATCCTCCAAAGAACGTTAAACTATGGAAGGCATCCTCAGTGGA
CCTTCCTATAGAATGGTCCAATGCATTCCAATTGGTCCATCAACGCCTTCTCATTAGTGCGCTCACATCAAAGGA
TTGGCCTTTAGCGGTGAACGAGCTCTTTCGCGTCACAAAGCCTGGCGGCTGGGTAGAACTCTGTGAAGCTGGTGC
AGAAATTGATTGCCCCTCTCATCCAAACCACAGGGCGCTCACAGCTGCGCGAATCGCATACGAAGCAAGTGACCA
CGTTATCCAAGCCGCCATGTTGTTGCCTCAATGGTTGAAAGACGCTGGTTTCGTTAAAATCCAATCCGTGGAGGG
AAAGTACCCCATAGGAAAGTGGGCCGGATCTGACGGAGAACATGCTCGTCATGGACTAATTGGATTTTTGAGGGC
CCTCAAGGCGCCTATTTTGACCAAAGGAGGTTTAGGATTCGCAGAGTCCGAAGAAGAATATGATGCCATTATTGA
TGATTTTGAACGAATTTGTGACAATACGCCGAATACGATTGGGAGGAATTACACTATATACGCCCATAAACCTGT
GCAAATTGTATGTTTCAATTCTCATCGACATTCTCGATAGTTTTCAGCACTGACCTCAAACCTCACCAGGTATCA
TGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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