© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH39|349200 |
| Gene name | |
| Location | scaffold_05:406409..407994 |
| Strand | - |
| Gene length (bp) | 1585 |
| Transcript length (bp) | 1236 |
| Coding sequence length (bp) | 1236 |
| Protein length (aa) | 412 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF19086 | Terpene_syn_C_2 | Terpene synthase family 2, C-terminal metal binding | 2.2E-50 | 150 | 338 |
| PF03936 | Terpene_synth_C | Terpene synthase family, metal binding domain | 1.1E-06 | 215 | 331 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A8NE23|COP3_COPC7 | Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 | 85 | 400 | 2.0E-97 |
| sp|P0DL13|PRO1_ARMGA | Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 | 95 | 404 | 5.0E-42 |
| sp|A8NU13|COP4_COPC7 | Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 | 89 | 406 | 2.0E-37 |
| sp|B2J4A4|GERAS_NOSP7 | Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 | 106 | 384 | 1.0E-32 |
| sp|Q6WP50|BOT2_BOTFU | Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 | 101 | 408 | 6.0E-28 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A8NE23|COP3_COPC7 | Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 | 85 | 400 | 2.0E-97 |
| sp|P0DL13|PRO1_ARMGA | Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 | 95 | 404 | 5.0E-42 |
| sp|A8NU13|COP4_COPC7 | Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 | 89 | 406 | 2.0E-37 |
| sp|B2J4A4|GERAS_NOSP7 | Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 | 106 | 384 | 1.0E-32 |
| sp|Q6WP50|BOT2_BOTFU | Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 | 101 | 408 | 6.0E-28 |
| sp|B5GS26|DCADS_STRC2 | (-)-delta-cadinene synthase OS=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) GN=SCreLAV_p0328 PE=1 SV=1 | 73 | 384 | 1.0E-21 |
| sp|D8RLD3|MTS17_SELML | (+)-germacrene D synthase OS=Selaginella moellendorffii GN=SELMODRAFT_412756 PE=1 SV=1 | 128 | 384 | 4.0E-19 |
| sp|J9R1J8|MTS1_SELML | Microbial Terpene synthase-like protein 1 OS=Selaginella moellendorffii GN=SELMODRAFT_402353 PE=1 SV=2 | 128 | 384 | 2.0E-17 |
| sp|Q82RR7|TPC1_STRAW | Avermitilol synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=tpc1 PE=1 SV=1 | 200 | 384 | 2.0E-15 |
| sp|E3VWJ0|PNTA_STRAE | Pentalenene synthase OS=Streptomyces arenae GN=pntA PE=3 SV=1 | 130 | 384 | 2.0E-12 |
| sp|Q82IY4|PTLA_STRAW | Pentalenene synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlA PE=1 SV=1 | 130 | 384 | 4.0E-12 |
| sp|Q55012|PENA_STREX | Pentalenene synthase OS=Streptomyces exfoliatus GN=penA PE=1 SV=4 | 130 | 384 | 8.0E-12 |
| sp|Q9X839|CYC2_STRCO | Germacradienol/geosmin synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc2 PE=1 SV=3 | 200 | 384 | 2.0E-11 |
| sp|Q9X839|CYC2_STRCO | Germacradienol/geosmin synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc2 PE=1 SV=3 | 130 | 387 | 8.0E-11 |
| sp|J9R393|MTS13_SELML | Microbial Terpene synthase-like protein 13 OS=Selaginella moellendorffii GN=SELMODRAFT_412537 PE=2 SV=2 | 200 | 388 | 1.0E-10 |
| sp|B1W019|GCOA_STRGG | (+)-caryolan-1-ol synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcoA PE=1 SV=1 | 151 | 388 | 2.0E-10 |
| sp|Q9K499|CYC1_STRCO | Epi-isozizaene synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc1 PE=1 SV=1 | 105 | 377 | 2.0E-08 |
| sp|Q9F1V8|MIBS_STRGR | 2-methylisoborneol synthase OS=Streptomyces griseus PE=3 SV=1 | 107 | 388 | 3.0E-08 |
| sp|A4FG19|MIBS_SACEN | 2-methylisoborneol synthase OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) GN=SACE_3722 PE=1 SV=1 | 195 | 384 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000287 | magnesium ion binding | Yes |
| GO:0016829 | lyase activity | Yes |
| GO:0010333 | terpene synthase activity | Yes |
| GO:0005488 | binding | No |
| GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | No |
| GO:0003824 | catalytic activity | No |
| GO:0043169 | cation binding | No |
| GO:0016835 | carbon-oxygen lyase activity | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0046872 | metal ion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH39|349200 MHSLKCFSVPALLTLNHLDRISGLDCGVVPENIWTVCPFRQLNAKEQYFTDPLESEQHHSFFLSRSLALLSHSSP QQCPTRWSSPLPHSPRGMTLPTTLSSQTSSSEKWLLKLAKHPRAKQIKFLGLKAGELTAACYPDTDGFRLRVCDD FMNYLFNLDDWLDDFDVNDTYGMRNCCIGAMQDPQGFQTKKRAGRLTKHFFKRFAKGAGPGCRERFIHSMDLFFT AVATQSRDRADGITPDLDSYITVRRDTSGCKPCFQLIEFAGDFDLPDEVVNHELIQNLEEATNDLVTWSNDIFSY NKEQKYHDTHNMITVVMNQYGFTLQQAVDFVGFKCKKSIENFEYDRNRLPSWGIEIDRMVEKYVDGLQNWIVGSL HWSFDTERYFSKDGHQIKKHRLVKLSPKVPLVVFQA* |
| Coding | >AgabiH39|349200 ATGCATTCACTCAAATGTTTCTCTGTGCCGGCCTTGTTGACATTGAACCATCTCGATCGCATTTCCGGGCTGGAC TGTGGAGTCGTCCCAGAAAATATATGGACTGTTTGCCCGTTCCGTCAACTCAATGCCAAGGAACAATACTTCACG GACCCTTTAGAATCTGAACAACATCATTCATTCTTTTTAAGTCGAAGTCTTGCTCTTCTCTCGCATTCGTCGCCG CAACAATGCCCAACCAGATGGTCTTCTCCCCTTCCTCATTCTCCAAGAGGAATGACACTCCCGACCACTTTATCC TCCCAGACCTCGTCGTCTGAGAAATGGCTTCTCAAACTCGCTAAACACCCCCGGGCTAAGCAAATCAAGTTCCTG GGTCTCAAAGCCGGCGAACTCACTGCGGCTTGTTATCCCGATACGGACGGCTTCCGTCTTCGCGTATGCGATGAC TTCATGAACTACTTGTTCAATCTTGACGACTGGTTGGATGATTTTGATGTCAACGACACCTATGGTATGAGGAAT TGTTGCATCGGCGCTATGCAGGACCCGCAAGGTTTCCAGACGAAAAAGAGGGCCGGTCGATTGACCAAACATTTT TTCAAACGATTTGCCAAGGGTGCCGGTCCCGGCTGCCGTGAGAGATTCATCCATAGTATGGATCTCTTTTTTACA GCCGTGGCCACGCAATCTCGAGACCGCGCGGACGGTATTACTCCCGATCTCGATTCTTACATCACCGTGCGTAGG GATACGAGTGGCTGTAAACCCTGTTTCCAACTTATCGAATTCGCCGGAGACTTCGACTTGCCCGATGAAGTTGTC AATCACGAGTTGATTCAAAACTTGGAAGAAGCGACTAACGACCTCGTTACTTGGTCCAATGATATTTTCTCGTAC AACAAAGAGCAAAAATATCATGACACTCACAACATGATCACTGTCGTTATGAATCAATACGGATTCACACTCCAA CAAGCCGTCGACTTTGTCGGATTCAAATGCAAGAAGAGTATCGAAAACTTCGAATATGACCGAAATCGCCTTCCT TCTTGGGGTATCGAGATCGACCGCATGGTCGAGAAGTACGTTGATGGTTTGCAAAATTGGATCGTTGGATCTTTG CATTGGTCTTTTGATACCGAAAGGTACTTTTCCAAGGACGGCCACCAAATTAAGAAGCATAGACTCGTAAAGCTC TCCCCAAAGGTTCCACTTGTGGTTTTTCAGGCTTGA |
| Transcript | >AgabiH39|349200 ATGCATTCACTCAAATGTTTCTCTGTGCCGGCCTTGTTGACATTGAACCATCTCGATCGCATTTCCGGGCTGGAC TGTGGAGTCGTCCCAGAAAATATATGGACTGTTTGCCCGTTCCGTCAACTCAATGCCAAGGAACAATACTTCACG GACCCTTTAGAATCTGAACAACATCATTCATTCTTTTTAAGTCGAAGTCTTGCTCTTCTCTCGCATTCGTCGCCG CAACAATGCCCAACCAGATGGTCTTCTCCCCTTCCTCATTCTCCAAGAGGAATGACACTCCCGACCACTTTATCC TCCCAGACCTCGTCGTCTGAGAAATGGCTTCTCAAACTCGCTAAACACCCCCGGGCTAAGCAAATCAAGTTCCTG GGTCTCAAAGCCGGCGAACTCACTGCGGCTTGTTATCCCGATACGGACGGCTTCCGTCTTCGCGTATGCGATGAC TTCATGAACTACTTGTTCAATCTTGACGACTGGTTGGATGATTTTGATGTCAACGACACCTATGGTATGAGGAAT TGTTGCATCGGCGCTATGCAGGACCCGCAAGGTTTCCAGACGAAAAAGAGGGCCGGTCGATTGACCAAACATTTT TTCAAACGATTTGCCAAGGGTGCCGGTCCCGGCTGCCGTGAGAGATTCATCCATAGTATGGATCTCTTTTTTACA GCCGTGGCCACGCAATCTCGAGACCGCGCGGACGGTATTACTCCCGATCTCGATTCTTACATCACCGTGCGTAGG GATACGAGTGGCTGTAAACCCTGTTTCCAACTTATCGAATTCGCCGGAGACTTCGACTTGCCCGATGAAGTTGTC AATCACGAGTTGATTCAAAACTTGGAAGAAGCGACTAACGACCTCGTTACTTGGTCCAATGATATTTTCTCGTAC AACAAAGAGCAAAAATATCATGACACTCACAACATGATCACTGTCGTTATGAATCAATACGGATTCACACTCCAA CAAGCCGTCGACTTTGTCGGATTCAAATGCAAGAAGAGTATCGAAAACTTCGAATATGACCGAAATCGCCTTCCT TCTTGGGGTATCGAGATCGACCGCATGGTCGAGAAGTACGTTGATGGTTTGCAAAATTGGATCGTTGGATCTTTG CATTGGTCTTTTGATACCGAAAGGTACTTTTCCAAGGACGGCCACCAAATTAAGAAGCATAGACTCGTAAAGCTC TCCCCAAAGGTTCCACTTGTGGTTTTTCAGGCTTGA |
| Gene | >AgabiH39|349200 ATGCATTCACTCAAATGTTTCTCTGTGCCGGCCTTGTTGACATTGAACCATCTCGATCGCGTATATCGAGACAAA AGAACTGCACGGTCTTCAAAGGAACGTAATCAAAGATTTCCGGGCTGGACTGTGGAGTCGTCCCAGAAAATATAT GGACTGTTTGCCCGTTCCGTCAACTCAATGCCAAGGAACAATACTTCACGGACCCTTTAGAATCTGAACAACATC ATTCATTCTTTTTAAGGTATGTTCCGTTGGCGAAACCGAAAATATATAAACCCTTGGAACAAATCCGAACCTACA GTCGAAGTCTTGCTCTTCTCTCGCATTCGTCGCCGCAACAATGCCCAACCAGATGGTCTTCTCCCCTTCCTCATT CTCCAAGAGGAATGACACTCCCGACCACTTTATCCTCCCAGACCTCGTCGGTCATTGTTCCTATACCGTACGTCT CAACCCCAACTGCGATCGCATGGCCCGGCAGTCTGAGAAATGGCTTCTCAAACTCGCTAAACACCCCCGGGCTAA GCAAATCAAGTTCCTGGGTCTCAAAGCCGGCGAACTCACTGCGGCTTGTTATCCCGATACGGACGGCTTCCGTCT TCGCGTATGCGATGACTTCATGAACTACTTGTTCAATCTTGACGACTGGTTGGATGATTTTGATGTCAACGACAC CTATGGTATGAGGAATTGTTGCATCGGCGCTATGCAGGACCCGCAAGGTTTCCAGACGAAAAAGAGGGCCGGTCG ATTGACCAAACAGTACGAAATTACATTCTTAATCTCCTCATCTTTCATTTAATTAACTGTCACCGTTCTAGTTTT TTCAAACGATTTGCCAAGGGTGCCGGTCCCGGCTGCCGTGAGAGATTCATCCATAGTATGGATCTCTTTTTTACA GCCGTGGCCACGCAATCTCGAGACCGCGCGGACGGTATTACTCCCGATCTCGATTCTTACATCACCGTGCGTAGG GATACGAGTGGCTGTAAACCCTGTTTCCAACTTATCGAATTCGCCGGAGACTTCGACTTGCCCGATGAAGTTGTC AATCACGAGTTGATTCAAAACTTGGAAGAAGCGACTAACGACCTCGTTACTTGGTCCAATGTAAGTACTATTCTT TTCCCATACGTCTGCGAATTATTCACGATATGTCTCCCTTCTGCATAGGATATTTTCTCGTACAACAAAGAGCAA AAATATCATGACACTCACAACATGATCACTGTCGTTATGAATCAATACGGATTCACACTCCAACAAGCCGTCGAC TTTGTCGGATTCAAATGCAAGAAGAGTATCGAAAACTTCGAATATGACCGAAATCGCCTTCCTTCTTGGGGTATC GAGATCGACCGCATGGTCGAGAAGTACGTTGATGGTTTGCAAAATTGGATCGTTGGTCCGTTACTTTTCCATGTG AATGTTATTCTCCCCCGACTCACCCGGACTGCTTTTTTTAGGATCTTTGCATTGGTCTTTTGATACCGAAAGGTA CTTTTCCAAGGACGGCCACCAAATTAAGAAGCATAGACTCGTAAAGCTCTCCCCAAAGGTTCCACTTGTGGTTTT TCAGGCTTGA |