Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|291900
Gene name
Locationscaffold_03:2285113..2286025
Strand+
Gene length (bp)912
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13650 Asp_protease_2 Aspartyl protease 1.5E-07 167 256
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.1E-07 168 254

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup85
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|291900 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|039720
Agaricus bisporus var bisporus H97 AgabiH97|086810
Agaricus bisporus var bisporus H97 AgabiH97|089510
Agaricus bisporus var bisporus H97 AgabiH97|098710
Agaricus bisporus var bisporus H97 AgabiH97|107800
Rhodonia placenta FPRL280 RhoplFPRL280|1232_2
Rhodonia placenta FPRL280 RhoplFPRL280|1518_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|291900
MKPVVDVPPLPAKYFREEKKGPSYKQQARIEEGISIEEMLDKFGETEIKLSQKELLAMAPKLREALKDLLSKRRV
PTGENNAFEASMIEEDTKDEWLYTNVEDLGKAKKVQTVVRDKGGELVEVWEVEEPLTQYLTTLPPDKRDRLVFTV
ETAEIKSAGNMGQLRVIPAVINGVREEEALLDSGSQIVTMSREAASDCKIPWDPSLAINMQSANGSITRTCGLAK
NVPFIFGNITVYLQVHVIEEAPYRVLLGRPFDVITESKIVNSSSGQQFITITDPNTKEWASLATYDKGELPKTME
TNF*
Coding >AgabiH39|291900
ATGAAGCCGGTAGTGGATGTACCTCCGCTACCAGCTAAATATTTTAGAGAAGAAAAGAAGGGCCCTAGTTATAAA
CAACAGGCCAGAATCGAAGAAGGCATTAGTATCGAAGAGATGCTAGATAAATTCGGCGAAACGGAGATAAAGCTC
TCCCAGAAGGAACTACTAGCAATGGCACCTAAGTTACGCGAAGCCCTTAAGGACTTATTGAGCAAGAGGAGGGTC
CCTACAGGAGAAAATAATGCCTTCGAAGCGAGCATGATAGAGGAAGATACAAAAGATGAATGGTTATATACCAAT
GTCGAGGATCTCGGAAAAGCTAAGAAAGTGCAAACTGTAGTTCGAGACAAGGGAGGGGAATTGGTAGAGGTCTGG
GAAGTAGAGGAACCTCTCACCCAGTATTTAACTACACTACCCCCGGATAAGAGGGACCGTTTAGTTTTCACGGTC
GAGACGGCAGAAATAAAGAGTGCCGGAAATATGGGACAGCTTCGAGTAATCCCAGCGGTAATAAATGGAGTTCGC
GAAGAAGAAGCTTTGCTAGATAGTGGATCACAGATAGTGACCATGAGTCGAGAAGCAGCTAGTGACTGCAAGATA
CCTTGGGACCCATCATTAGCGATTAATATGCAAAGCGCTAATGGAAGTATAACCCGGACTTGCGGGTTAGCGAAG
AACGTTCCTTTCATTTTCGGAAATATTACCGTGTATCTACAAGTACATGTTATCGAAGAAGCTCCCTACCGAGTA
TTATTAGGGAGGCCCTTTGACGTGATCACAGAAAGCAAAATAGTGAACTCTTCCTCGGGACAACAGTTCATCACT
ATCACGGATCCAAACACAAAAGAGTGGGCCTCGTTAGCTACTTATGATAAAGGGGAGCTACCCAAAACTATGGAG
ACAAATTTTTAA
Transcript >AgabiH39|291900
ATGAAGCCGGTAGTGGATGTACCTCCGCTACCAGCTAAATATTTTAGAGAAGAAAAGAAGGGCCCTAGTTATAAA
CAACAGGCCAGAATCGAAGAAGGCATTAGTATCGAAGAGATGCTAGATAAATTCGGCGAAACGGAGATAAAGCTC
TCCCAGAAGGAACTACTAGCAATGGCACCTAAGTTACGCGAAGCCCTTAAGGACTTATTGAGCAAGAGGAGGGTC
CCTACAGGAGAAAATAATGCCTTCGAAGCGAGCATGATAGAGGAAGATACAAAAGATGAATGGTTATATACCAAT
GTCGAGGATCTCGGAAAAGCTAAGAAAGTGCAAACTGTAGTTCGAGACAAGGGAGGGGAATTGGTAGAGGTCTGG
GAAGTAGAGGAACCTCTCACCCAGTATTTAACTACACTACCCCCGGATAAGAGGGACCGTTTAGTTTTCACGGTC
GAGACGGCAGAAATAAAGAGTGCCGGAAATATGGGACAGCTTCGAGTAATCCCAGCGGTAATAAATGGAGTTCGC
GAAGAAGAAGCTTTGCTAGATAGTGGATCACAGATAGTGACCATGAGTCGAGAAGCAGCTAGTGACTGCAAGATA
CCTTGGGACCCATCATTAGCGATTAATATGCAAAGCGCTAATGGAAGTATAACCCGGACTTGCGGGTTAGCGAAG
AACGTTCCTTTCATTTTCGGAAATATTACCGTGTATCTACAAGTACATGTTATCGAAGAAGCTCCCTACCGAGTA
TTATTAGGGAGGCCCTTTGACGTGATCACAGAAAGCAAAATAGTGAACTCTTCCTCGGGACAACAGTTCATCACT
ATCACGGATCCAAACACAAAAGAGTGGGCCTCGTTAGCTACTTATGATAAAGGGGAGCTACCCAAAACTATGGAG
ACAAATTTTTAA
Gene >AgabiH39|291900
ATGAAGCCGGTAGTGGATGTACCTCCGCTACCAGCTAAATATTTTAGAGAAGAAAAGAAGGGCCCTAGTTATAAA
CAACAGGCCAGAATCGAAGAAGGCATTAGTATCGAAGAGATGCTAGATAAATTCGGCGAAACGGAGATAAAGCTC
TCCCAGAAGGAACTACTAGCAATGGCACCTAAGTTACGCGAAGCCCTTAAGGACTTATTGAGCAAGAGGAGGGTC
CCTACAGGAGAAAATAATGCCTTCGAAGCGAGCATGATAGAGGAAGATACAAAAGATGAATGGTTATATACCAAT
GTCGAGGATCTCGGAAAAGCTAAGAAAGTGCAAACTGTAGTTCGAGACAAGGGAGGGGAATTGGTAGAGGTCTGG
GAAGTAGAGGAACCTCTCACCCAGTATTTAACTACACTACCCCCGGATAAGAGGGACCGTTTAGTTTTCACGGTC
GAGACGGCAGAAATAAAGAGTGCCGGAAATATGGGACAGCTTCGAGTAATCCCAGCGGTAATAAATGGAGTTCGC
GAAGAAGAAGCTTTGCTAGATAGTGGATCACAGATAGTGACCATGAGTCGAGAAGCAGCTAGTGACTGCAAGATA
CCTTGGGACCCATCATTAGCGATTAATATGCAAAGCGCTAATGGAAGTATAACCCGGACTTGCGGGTTAGCGAAG
AACGTTCCTTTCATTTTCGGAAATATTACCGTGTATCTACAAGTACATGTTATCGAAGAAGCTCCCTACCGAGTA
TTATTAGGGAGGCCCTTTGACGTGATCACAGAAAGCAAAATAGTGAACTCTTCCTCGGGACAACAGTTCATCACT
ATCACGGATCCAAACACAAAAGAGTGGGCCTCGTTAGCTACTTATGATAAAGGGGAGCTACCCAAAACTATGGAG
ACAAATTTTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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