Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH39\|112190
Gene name
Location	scaffold_08:1809618..1810581
Strand	+
Gene length (bp)	963
Transcript length (bp)	840
Coding sequence length (bp)	840
Protein length (aa)	280

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH39\|112190 MSDSDVSTKSPIGSPPLILACLAIGIFSAALISVFGWRRVRFTNDGGSRGILGRPELDPWSNLRERPGIGEKPIM WEVWTDRNAKINNMGYGCWRLVMPLALHCSPPEPSNHESATEVNPPSLPTASLPTTARRRPFRGFAFRSLLPLHR QTVTLDPLLPVEAAEYKEEEEVSGMAEAAEKKQTQVAIIIEMPSLASSRRRHDHPFLGSPEHQKHQSYYSALSKS ETLVEAHDKVKDDCLESGFEEGEHEYCIGVHICPWTISTKLKEDKEASRTMENR*
Coding	>AgabiH39\|112190 ATGTCCGATTCAGACGTCTCCACCAAATCCCCCATCGGTTCTCCCCCGCTTATTCTTGCCTGCCTTGCCATAGGC ATATTCTCTGCTGCCCTGATATCCGTTTTTGGTTGGCGACGGGTGCGATTTACGAATGATGGCGGGAGTCGCGGT ATTTTGGGTCGACCTGAACTCGACCCTTGGAGCAATCTGAGAGAGAGGCCAGGGATAGGTGAAAAACCCATTATG TGGGAAGTGTGGACGGATCGGAATGCAAAGATAAATAACATGGGGTATGGTTGTTGGCGTCTTGTCATGCCTCTT GCACTTCATTGCAGTCCTCCAGAACCTTCAAATCACGAGTCCGCTACGGAAGTGAACCCCCCTTCTTTACCAACA GCCTCACTTCCTACAACAGCACGCCGAAGACCGTTCCGGGGCTTTGCATTTCGTTCTCTCCTTCCGCTACATCGT CAGACTGTCACTCTCGACCCCTTGCTTCCCGTGGAAGCCGCTGAATATAAAGAAGAAGAAGAAGTCAGCGGAATG GCGGAGGCGGCAGAAAAGAAGCAAACGCAAGTTGCTATTATAATTGAAATGCCATCTTTGGCATCATCCCGACGC CGACACGACCACCCCTTTCTCGGAAGTCCTGAACATCAAAAACACCAAAGCTACTACTCTGCTCTCTCAAAGTCG GAAACGCTGGTCGAGGCGCACGACAAGGTGAAAGATGATTGTTTAGAGTCTGGGTTTGAGGAGGGCGAACATGAG TATTGCATTGGTGTTCATATTTGTCCTTGGACTATCTCAACGAAACTAAAGGAAGACAAAGAGGCTTCACGGACG ATGGAAAATCGTTGA
Transcript	>AgabiH39\|112190 ATGTCCGATTCAGACGTCTCCACCAAATCCCCCATCGGTTCTCCCCCGCTTATTCTTGCCTGCCTTGCCATAGGC ATATTCTCTGCTGCCCTGATATCCGTTTTTGGTTGGCGACGGGTGCGATTTACGAATGATGGCGGGAGTCGCGGT ATTTTGGGTCGACCTGAACTCGACCCTTGGAGCAATCTGAGAGAGAGGCCAGGGATAGGTGAAAAACCCATTATG TGGGAAGTGTGGACGGATCGGAATGCAAAGATAAATAACATGGGGTATGGTTGTTGGCGTCTTGTCATGCCTCTT GCACTTCATTGCAGTCCTCCAGAACCTTCAAATCACGAGTCCGCTACGGAAGTGAACCCCCCTTCTTTACCAACA GCCTCACTTCCTACAACAGCACGCCGAAGACCGTTCCGGGGCTTTGCATTTCGTTCTCTCCTTCCGCTACATCGT CAGACTGTCACTCTCGACCCCTTGCTTCCCGTGGAAGCCGCTGAATATAAAGAAGAAGAAGAAGTCAGCGGAATG GCGGAGGCGGCAGAAAAGAAGCAAACGCAAGTTGCTATTATAATTGAAATGCCATCTTTGGCATCATCCCGACGC CGACACGACCACCCCTTTCTCGGAAGTCCTGAACATCAAAAACACCAAAGCTACTACTCTGCTCTCTCAAAGTCG GAAACGCTGGTCGAGGCGCACGACAAGGTGAAAGATGATTGTTTAGAGTCTGGGTTTGAGGAGGGCGAACATGAG TATTGCATTGGTGTTCATATTTGTCCTTGGACTATCTCAACGAAACTAAAGGAAGACAAAGAGGCTTCACGGACG ATGGAAAATCGTTGA
Gene	>AgabiH39\|112190 ATGTCCGATTCAGACGTCTCCACCAAATCCCCCATCGGTTCTCCCCCGCTTATTCTTGCCTGCCTTGCCATAGGC ATATTCTCTGCTGCCCTGATATCCGTTTTTGGTTGGCGACGGGTGCGATTTACGAATGATGGCGGGAGTCGCGGT ATTTTGGGTCGACCTGAACTCGACCCTTGGAGCAATCTGAGAGAGAGGCCAGGGATAGGTGAAAAACCCATTATG TGGGAAGTGTGGACGGATCGGAATGCAAAGATAAATAACATGGGGTATGGTTGTTGGCGTCTTGTCATGGTAGGC TGGCTTCTTTCAATTCATCCAAGAATTTGGCTTCACGCTTCTTCTTACCCTCCTATTTCGCCCTTTGTGATTCAA AGTGACTACAGTACTGACGTTTCCGTGCTATTTCTTATACAGCCTCTTGCACTTCATTGCAGTCCTCCAGAACCT TCAAATCACGAGTCCGCTACGGAAGTGAACCCCCCTTCTTTACCAACAGCCTCACTTCCTACAACAGCACGCCGA AGACCGTTCCGGGGCTTTGCATTTCGTTCTCTCCTTCCGCTACATCGTCAGACTGTCACTCTCGACCCCTTGCTT CCCGTGGAAGCCGCTGAATATAAAGAAGAAGAAGAAGTCAGCGGAATGGCGGAGGCGGCAGAAAAGAAGCAAACG CAAGTTGCTATTATAATTGAAATGCCATCTTTGGCATCATCCCGACGCCGACACGACCACCCCTTTCTCGGAAGT CCTGAACATCAAAAACACCAAAGCTACTACTCTGCTCTCTCAAAGTCGGAAACGCTGGTCGAGGCGCACGACAAG GTGAAAGATGATTGTTTAGAGTCTGGGTTTGAGGAGGGCGAACATGAGTATTGCATTGGTGTTCATATTTGTCCT TGGACTATCTCAACGAAACTAAAGGAAGACAAAGAGGCTTCACGGACGATGGAAAATCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail