Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|103490
Gene name
Locationscaffold_07:1509171..1511185
Strand+
Gene length (bp)2014
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 1.2E-18 198 282

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 81 103 22
3 118 140 22
4 153 175 22
5 190 212 22
6 233 255 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|103490
MSTIGVQNPASTAPHHSPPYYIPVSSSLENKALGQMAGGSEIVHGPLFLGTAFNVLLYGISITQTYLYLTNSKAD
KWFIKYFVYFLFITDTIHTVFTLVYLYDSLIKNFGNVPYLETANWIFSTDPALTGIIGGAVQAFFSWRVKVLTRN
TFLSLFILFCSVISFFMGLATAAAIAFIPKFIEFQRFRIVVILWLGSSCIADIVITTTMVLYLRRHRTGFSQTDH
QVDRIIRVTMHTGLVTALWALVDLLLYLSSSSGKHLFFNFCLSKLYTNSLMSSLNSRGGWRYNEDSNAAFAFEHK
RSTANFQNQPNSNIMAPEVFVHVESHELVNPALKVDQRIYEDMTSNFDTESKRSIVM*
Coding >AgabiH39|103490
ATGTCAACCATTGGTGTACAAAATCCAGCCAGTACCGCGCCACATCATTCCCCTCCCTATTACATCCCAGTCTCG
AGCTCGTTGGAGAACAAAGCATTGGGGCAAATGGCCGGCGGTTCTGAGATAGTTCACGGTCCTCTATTTCTTGGC
ACTGCTTTCAACGTTTTGCTCTATGGCATATCCATCACACAGACGTATCTTTACTTGACCAATTCCAAAGCGGAC
AAATGGTTTATCAAATACTTCGTCTACTTCTTGTTTATCACCGACACCATTCATACGGTCTTTACTCTCGTTTAC
TTATATGATTCCTTGATCAAGAACTTTGGAAATGTTCCCTATCTTGAGACAGCGAACTGGATTTTCTCTACCGAT
CCAGCTCTGACTGGAATCATCGGTGGAGCAGTACAAGCCTTCTTTTCTTGGAGAGTCAAGGTTTTGACACGCAAT
ACCTTCCTCTCTCTATTCATTCTTTTCTGCTCCGTCATTTCATTTTTCATGGGTTTGGCTACCGCCGCTGCCATA
GCTTTCATTCCCAAGTTCATCGAATTCCAGAGGTTTAGAATCGTCGTCATCCTCTGGTTGGGATCTTCTTGTATA
GCTGATATTGTGATCACCACCACCATGGTATTATACCTTCGAAGGCATAGAACAGGATTCTCACAGACTGACCAT
CAGGTTGATAGAATCATTCGAGTTACTATGCATACAGGTCTGGTTACAGCATTGTGGGCTCTTGTTGACCTACTA
CTCTACCTATCAAGTTCATCTGGAAAACATTTATTTTTCAACTTTTGTTTATCAAAATTGTACACCAATTCTCTC
ATGAGTAGTCTCAATTCTCGCGGTGGATGGAGATACAATGAAGACAGTAATGCTGCGTTTGCATTCGAACACAAA
CGGTCTACTGCAAATTTTCAAAATCAACCGAACTCTAACATCATGGCACCTGAGGTTTTCGTTCACGTCGAATCG
CACGAATTGGTCAATCCTGCCCTTAAAGTCGATCAAAGAATCTATGAGGATATGACTAGTAATTTCGATACCGAG
TCCAAGAGAAGCATAGTTATGTGA
Transcript >AgabiH39|103490
ATGTCAACCATTGGTGTACAAAATCCAGCCAGTACCGCGCCACATCATTCCCCTCCCTATTACATCCCAGTCTCG
AGCTCGTTGGAGAACAAAGCATTGGGGCAAATGGCCGGCGGTTCTGAGATAGTTCACGGTCCTCTATTTCTTGGC
ACTGCTTTCAACGTTTTGCTCTATGGCATATCCATCACACAGACGTATCTTTACTTGACCAATTCCAAAGCGGAC
AAATGGTTTATCAAATACTTCGTCTACTTCTTGTTTATCACCGACACCATTCATACGGTCTTTACTCTCGTTTAC
TTATATGATTCCTTGATCAAGAACTTTGGAAATGTTCCCTATCTTGAGACAGCGAACTGGATTTTCTCTACCGAT
CCAGCTCTGACTGGAATCATCGGTGGAGCAGTACAAGCCTTCTTTTCTTGGAGAGTCAAGGTTTTGACACGCAAT
ACCTTCCTCTCTCTATTCATTCTTTTCTGCTCCGTCATTTCATTTTTCATGGGTTTGGCTACCGCCGCTGCCATA
GCTTTCATTCCCAAGTTCATCGAATTCCAGAGGTTTAGAATCGTCGTCATCCTCTGGTTGGGATCTTCTTGTATA
GCTGATATTGTGATCACCACCACCATGGTATTATACCTTCGAAGGCATAGAACAGGATTCTCACAGACTGACCAT
CAGGTTGATAGAATCATTCGAGTTACTATGCATACAGGTCTGGTTACAGCATTGTGGGCTCTTGTTGACCTACTA
CTCTACCTATCAAGTTCATCTGGAAAACATTTATTTTTCAACTTTTGTTTATCAAAATTGTACACCAATTCTCTC
ATGAGTAGTCTCAATTCTCGCGGTGGATGGAGATACAATGAAGACAGTAATGCTGCGTTTGCATTCGAACACAAA
CGGTCTACTGCAAATTTTCAAAATCAACCGAACTCTAACATCATGGCACCTGAGGTTTTCGTTCACGTCGAATCG
CACGAATTGGTCAATCCTGCCCTTAAAGTCGATCAAAGAATCTATGAGGATATGACTAGTAATTTCGATACCGAG
TCCAAGAGAAGCATAGTTATGTGA
Gene >AgabiH39|103490
ATGTCAACCATTGGTGTACAAAATCCAGCCAGTACCGCGCCACATCATTCCCCTCCCTATTACATCCCAGTCTCG
AGCTCGTTGGAGAACAAAGCATTGGGGCAAATGGCCGGCGGTTCTGAGATAGTGTTCGTATTGTCTGATCGTTAT
GCCAGTCTCATTTTCGATGATGCGGATTCTAGTCACGGTCCTCTATTTCTTGGCACTGCTTTCAACGTTTTGCTC
TATGGCATATCCATCACACAGACGTATCTTTACTTGACCAATTCCAAAGCGTAAGTTCTCATTAGCTGCTATTGT
TTGTTCTAATAGCCCATGTGTCTAGGGACAAATGGTTTATCAAATACTTCGTGAGTAATAACGGAAAAAACTGTA
TATATGAGTCTGATGAATTAAATACTTTCTGCGGACAGGTCTACTTCTTGTTTATCACCGACACCATTCATACGG
TCTTTACTCTCGTTTACTTATATGATTCCTTGATCAAGAACTTTGGTGATTATTTCGCGCAGCGTCGGAAACCAA
CAATCTTACAGCCGAACCGTAGGAAATGTTCCCTATCTTGAGACAGCGAACTGGATTTTCTCTACCGGTTCGTCT
CATTCAAAAAAGATTTTTTTGCCCATTTTGACTTCCTTTCGCTGACTCACAGATCCAGCTCTGACTGTAAGTCTA
CAATCTCCCTCGGAAGCCTTTTATATCTTCAAACCACAGGGAATCATCGGTGGAGCAGTACAAGCCTTCTTTTCT
TGGAGAGTCAAGGTTTTGACACGCAATACCTTCCTCTCTCTATTCATTCTTTTCTGCTCCGTCATTTCATTTTGT
GAGTCGCTTCCCCTCGGATTTTAACCCGCCACATCCCAAATATAACACGTAACACACGCACAGTCATGGGTTTGG
CTACCGCCGCTGCCATAGCTTTCATTCCCAAGTTCATCGAATTCCAGAGGTTTAGAATCGTCGTCATCCTCTGTG
AGCCCCTTTCTTATGTCAATATAAATAACGGACCTTAATATCGTTTCTTGAAAGGGTTGGGATCTTCTTGTATAG
CTGATATTGTGATCACCACCACCATGGTATTATACCTTGTGAGTTAATAGAGGAATAATCCCTCATCGTCATATC
CACCTTGTTTTCTGGTTAACCCGTCTTGTGAAGCGAAGGCATAGAACAGGATTCTCACAGACTGACCATCAGGTT
GATAGAATCATTCGAGGTCAGTTTGACTCTGATATCTCTACGCTTTTATCTGATCACAATCCTTCGTTTAGTTAC
TATGCATACAGGTAAGAGACATCATACTCTCACTGCCCGAAGCCCCGCTCATACCTGTCATCCTTGCCAGGTCTG
GTTACAGCATTGTGGGCGTACGTATCCACGCATTTTAAGCATTGAGTTGAGCTGATACATCTAGGCATACAGTCT
TGTTGACCTACTACTCTACCTATCAAGTGTAAGTCGTACTAGGCTACCTCTTCGTTGAATCCAAATATATCTATT
AACCTGTATCTTTCTCTTTCGTCGACTAGTCATCTGGAAAGTAAGAACCTTTCTCTACCTATAACATTGTCATAT
CGGATTCCCTGACGGCGAAACAAACCCATCACCCAGACATTTATTTTTCAACTTTTGTTTATCAAAATTGTACAC
CAATTCTCTCATGAGTAGTCTCAATTCTCGCGGTGGATGGAGATACAATGAAGACAGTAATGCTGCGTTTGCATT
CGAACACAAACGGGTATGTTGAGTTCGTGTACTTGTCCCTCATTATCTGACTGTCTCATATAGTCTACTGCAAAT
TTTCAAAATCAACCGAACTCTAACATCATGGCACCTGAGGTTCGTTCCCGCAAGTTTTTAAGAATGTTCAAAGAA
TAGCTAACTTCAGACATAGGTTTTCGTTCACGTCGAATCGCACGAATTGGTCAATCCTGCCCTTAAAGTCGATCA
AAGAATCTATGAGGATATGACTAGTAATTTCGATACCGAGTCCAAGAGAAGCATAGTTATGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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