Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|103360
Gene name
Locationscaffold_07:1481766..1483486
Strand-
Gene length (bp)1720
Transcript length (bp)1536
Coding sequence length (bp)1536
Protein length (aa) 512

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.7E-05 6 40
PF00646 F-box F-box domain 2.9E-04 5 39

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup4909
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|103360 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|103360
Rhodonia placenta FPRL280 RhoplFPRL280|77_8

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|103360
MTQMFTNLPNDVLICIFQFLSPVELAHLSLACSVLYHLVNEYGWSAYLRSHIRPSQSLSRARARWPARLRAKYDY
LTDEAWHNNSFVARPLSHPWQGKSSPLLIISQNRLIVASGTTLHSFTFGTSGDESNTSPPVSFEASFSLSSEHSP
CKEITGVTLVSSDGSNDVLFVAFQDSVIERISILASDGITPPSITRHHASTIPDSDPVESLSSASDLLLSLSLNG
SVKLANHRDLTSSVGLNWNSTVDLKARSWASYLCLSSSTPYAAFGTSNRSAPLPIYTLPYHQFSSSIPSLLLTSG
SRSNSPVTTSSSAVYGLSQAPPSSPWGSSPQILVAGWYDSKVRCYDLRTPTSSSIPFQSSDSLNGTPSSSLVNVP
ALNPVLSLHNPWSYEPIYSVSCGGGSGSFIAAGAARHSVLSFWDIRSPKGGWSVHAPGNDTSPVYSVILESSRCF
GATERRPFVYDFGPGVIIDTYPPITRVRGDKLKFDKSSGRKGVDYYVTKYPHSRGNMFIDH*
Coding >AgabiH39|103360
ATGACTCAAATGTTCACAAATCTACCCAACGACGTCCTCATTTGCATATTTCAATTCTTGTCCCCGGTCGAGCTC
GCCCATCTTTCCCTGGCATGCAGTGTTCTATATCATTTGGTCAATGAATACGGCTGGTCTGCCTACCTACGCTCG
CACATAAGGCCTTCCCAAAGCCTTTCCCGTGCCAGAGCGCGCTGGCCGGCGCGACTCCGCGCCAAATACGACTAC
CTCACCGATGAAGCCTGGCACAACAATTCTTTCGTCGCAAGGCCGCTATCTCACCCTTGGCAGGGCAAGAGTTCT
CCACTCCTTATCATTTCACAGAATCGCCTCATCGTTGCTTCGGGGACCACCCTCCATTCTTTCACATTTGGTACA
TCTGGTGATGAATCAAATACTTCCCCACCCGTCTCCTTCGAGGCCTCATTCTCTCTATCGAGTGAACATTCGCCT
TGTAAAGAGATCACTGGCGTTACTCTGGTTTCTTCCGATGGCTCCAATGACGTTCTTTTTGTTGCTTTCCAAGAC
AGCGTTATTGAACGCATCTCAATATTAGCATCGGATGGTATCACCCCACCCAGCATCACCCGCCACCACGCTAGT
ACAATACCCGATAGTGACCCTGTCGAAAGTCTCTCATCTGCCTCTGATCTTCTATTATCGCTATCTCTCAATGGA
TCCGTTAAACTCGCAAATCACCGTGATTTAACCTCTTCTGTAGGGCTTAATTGGAATTCCACAGTAGATCTCAAA
GCACGTAGTTGGGCGTCGTACCTGTGTCTTTCGTCTTCCACTCCCTATGCTGCATTCGGAACCTCCAATCGCTCT
GCACCACTTCCCATCTATACTCTACCTTACCACCAATTCTCATCCTCTATACCATCATTGCTTCTCACATCCGGA
TCAAGATCTAATTCTCCCGTAACCACATCTTCTTCCGCTGTCTACGGACTCTCTCAAGCACCTCCTTCTTCTCCC
TGGGGTTCTTCACCTCAAATTCTAGTTGCCGGTTGGTACGATAGTAAAGTTCGGTGTTATGATCTCCGCACTCCA
ACTTCGTCCTCTATCCCCTTCCAATCCTCCGACTCCCTTAACGGTACACCATCGTCGTCATTGGTGAACGTGCCA
GCACTCAATCCAGTACTTTCACTCCATAATCCTTGGTCATATGAACCCATATATTCTGTCTCCTGCGGTGGTGGT
TCAGGAAGTTTTATCGCTGCAGGTGCTGCACGTCATAGCGTACTCTCTTTTTGGGATATCCGATCTCCGAAAGGA
GGATGGAGCGTACATGCTCCAGGAAATGATACTTCACCCGTTTATTCAGTCATTCTTGAAAGTTCAAGGTGTTTT
GGAGCTACGGAACGTCGACCTTTTGTTTATGATTTCGGACCTGGCGTGATTATCGATACATACCCACCTATCACG
CGTGTGCGAGGTGATAAGCTCAAATTTGACAAATCATCCGGTCGGAAAGGTGTTGATTACTACGTGACAAAATAC
CCTCATAGCCGAGGAAACATGTTTATCGATCATTGA
Transcript >AgabiH39|103360
ATGACTCAAATGTTCACAAATCTACCCAACGACGTCCTCATTTGCATATTTCAATTCTTGTCCCCGGTCGAGCTC
GCCCATCTTTCCCTGGCATGCAGTGTTCTATATCATTTGGTCAATGAATACGGCTGGTCTGCCTACCTACGCTCG
CACATAAGGCCTTCCCAAAGCCTTTCCCGTGCCAGAGCGCGCTGGCCGGCGCGACTCCGCGCCAAATACGACTAC
CTCACCGATGAAGCCTGGCACAACAATTCTTTCGTCGCAAGGCCGCTATCTCACCCTTGGCAGGGCAAGAGTTCT
CCACTCCTTATCATTTCACAGAATCGCCTCATCGTTGCTTCGGGGACCACCCTCCATTCTTTCACATTTGGTACA
TCTGGTGATGAATCAAATACTTCCCCACCCGTCTCCTTCGAGGCCTCATTCTCTCTATCGAGTGAACATTCGCCT
TGTAAAGAGATCACTGGCGTTACTCTGGTTTCTTCCGATGGCTCCAATGACGTTCTTTTTGTTGCTTTCCAAGAC
AGCGTTATTGAACGCATCTCAATATTAGCATCGGATGGTATCACCCCACCCAGCATCACCCGCCACCACGCTAGT
ACAATACCCGATAGTGACCCTGTCGAAAGTCTCTCATCTGCCTCTGATCTTCTATTATCGCTATCTCTCAATGGA
TCCGTTAAACTCGCAAATCACCGTGATTTAACCTCTTCTGTAGGGCTTAATTGGAATTCCACAGTAGATCTCAAA
GCACGTAGTTGGGCGTCGTACCTGTGTCTTTCGTCTTCCACTCCCTATGCTGCATTCGGAACCTCCAATCGCTCT
GCACCACTTCCCATCTATACTCTACCTTACCACCAATTCTCATCCTCTATACCATCATTGCTTCTCACATCCGGA
TCAAGATCTAATTCTCCCGTAACCACATCTTCTTCCGCTGTCTACGGACTCTCTCAAGCACCTCCTTCTTCTCCC
TGGGGTTCTTCACCTCAAATTCTAGTTGCCGGTTGGTACGATAGTAAAGTTCGGTGTTATGATCTCCGCACTCCA
ACTTCGTCCTCTATCCCCTTCCAATCCTCCGACTCCCTTAACGGTACACCATCGTCGTCATTGGTGAACGTGCCA
GCACTCAATCCAGTACTTTCACTCCATAATCCTTGGTCATATGAACCCATATATTCTGTCTCCTGCGGTGGTGGT
TCAGGAAGTTTTATCGCTGCAGGTGCTGCACGTCATAGCGTACTCTCTTTTTGGGATATCCGATCTCCGAAAGGA
GGATGGAGCGTACATGCTCCAGGAAATGATACTTCACCCGTTTATTCAGTCATTCTTGAAAGTTCAAGGTGTTTT
GGAGCTACGGAACGTCGACCTTTTGTTTATGATTTCGGACCTGGCGTGATTATCGATACATACCCACCTATCACG
CGTGTGCGAGGTGATAAGCTCAAATTTGACAAATCATCCGGTCGGAAAGGTGTTGATTACTACGTGACAAAATAC
CCTCATAGCCGAGGAAACATGTTTATCGATCATTGA
Gene >AgabiH39|103360
ATGACTCAAGTACTAGGTTTACTTCAAAGCCCCGACAGCGGGGACGTTAGGTTCGCCTAGCTTAATTTTCACAGA
TGTTCACAAATCTACCCAACGACGTCCTCATTTGCATATTTCAATTCTTGTCCCCGGTCGAGCTCGCCCATCTTT
CCCTGGCATGCAGTGTTCTATATCATTTGGTGCGTCCTACATCTCCACCTATCAGTGAATGGCACTACATCTATC
GTCAGGTCAATGAATACGGCTGGTCTGCCTACCTACGCTCGCACATAAGGCCTTCCCAAAGCCTTTCCCGTGCCA
GAGCGCGCTGGCCGGCGCGACTCCGCGCCAAATACGACTACCTCACCGATGAAGCCTGGCACAACAATTCTTTCG
TCGCAAGGCCGCTATCTCACCCTTGGCAGGGCAAGAGTTCTCCACTCCTTATCATTTCACAGAATCGCCTCATCG
TTGCTTCGGGGACCACCCTCCATTCTTTCACATTTGGTACATCTGGTGATGAATCAAATACTTCCCCACCCGTCT
CCTTCGAGGCCTCATTCTCTCTATCGAGTGAACATTCGCCTTGTAAAGAGATCACTGGCGTTACTCTGGTTTCTT
CCGATGGCTCCAATGACGTTCTTTTTGTTGCTTTCCAAGACAGCGTTATTGAACGCATCTCAATATTAGCATCGG
ATGGTATCACCCCACCCAGCATCACCCGCCACCACGCTAGTACAATACCCGATAGTGACCCTGTCGAAAGTCTCT
CATCTGCCTCTGATCTTCTATTATCGCTATCTCTCAATGGATCCGTTAAACTCGCAAATCACCGTGATTTAACCT
CTTCTGTAGGGCTTAATTGGAATTCCACAGTAGATCTCAAAGCACGTAGTTGGGCGTCGTACCTGTGTCTTTCGT
CTTCCACTCCCTATGCTGCATTCGGAACCTCCAATCGCTCTGCACCACTTCCCATCTATACTCTACCTTACCACC
AATTCTCATCCTCTATACCATCATTGCTTCTCACATCCGGATCAAGATCTAATTCTCCCGTAACCACATCTTCTT
CCGCTGTCTACGGACTCTCTCAAGCACCTCCTTCTTCTCCCTGGGGTTCTTCACCTCAAATTCTAGTTGCCGGTT
GGTACGATAGTAAAGTTCGGTGTTATGATCTCCGCACTCCAACTTCGTCCTCTATCCCCTTCCAATCCTCCGACT
CCCTTAACGGTACACCATCGTCGTCATTGGTGAACGTGCCAGCACTCAATCCAGTACTTTCACTCCATAATCCTT
GGTCATATGAACCCATATATTCTGTCTCCTGCGGTGGTGGTTCAGGAAGTTTTATCGCTGCAGGTGCTGCACGTC
ATAGCGTACTCTCTTTTTGGGATATCCGATCTCCGAAAGGAGGATGGAGCGTACATGCTCCAGGAAATGATACTT
CACCCGTTTATTCAGTCATTCTTGAAAGTTCAAGGTGTTTTGGAGCTACGGAACGTCGACCTTTTGTTTATGATT
TCGTAAGTTGACTTATCTTTCTCTTTCTTTTTCCTTATCGAATGCGACACGATTATAATTTTCTTCTTAGGGACC
TGGCGTGATTATCGATACATACCCACCTATCACGCGTGTGCGAGGTGATAAGCTCAAATTTGACAAATCATCCGG
TCGGAAAGGTGTTGATTACTACGTGACAAAATACCCTCATAGCCGAGGAAACATGTTTATCGATCATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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