Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|102060
Gene name
Locationscaffold_07:1139309..1140884
Strand-
Gene length (bp)1575
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 7.2E-13 163 248

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 47 69 22
3 84 106 22
4 118 140 22
5 155 177 22
6 198 220 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|102060
MLDIESTLGVLLIGVFINTYLYGVVSYQYAKYSVTFKKDPHWVKLMVFVLFLMDTVHSASIIYMVWTFAVKSSEG
GPASTNAYWPYPFTVLVMVCTACIVQGFFTYRIWKLTSQHTVACALAVLIVGAFVLGVTVAVRAWKLKPHTSIGP
FNSLLAAWLVMEVVVDASIAGILIYKLSMSKTGHKNSDSVLNRLIRMSVQTGFCTGVFAVLCLIFFFVMPRTQYF
AMFGIPISRVYTITFMDALLGRSGLRDLLFLDPDEVGRSASRGARTLSAAIRLQVTKEVYTVTDREVSEQAHEMK
VHRV*
Coding >AgabiH39|102060
ATGTTAGATATTGAGTCCACTTTGGGGGTTTTGTTAATTGGTGTATTCATTAATACCTACCTTTACGGTGTGGTT
TCATATCAATATGCGAAGTATTCGGTTACTTTCAAGAAAGACCCACATTGGGTTAAATTAATGGTCTTTGTTTTA
TTCCTAATGGACACTGTTCACAGTGCATCCATCATCTATATGGTCTGGACATTTGCCGTGAAGAGCTCTGAGGGG
GGCCCGGCTTCGACGAACGCGTATTGGCCGTACCCCTTTACAGTATTGGTTATGGTCTGCACAGCATGCATAGTT
CAGGGCTTCTTCACATATAGGATTTGGAAATTGACTTCCCAACATACTGTTGCATGTGCCCTTGCGGTACTGATA
GTAGGGGCTTTTGTCCTGGGCGTGACTGTCGCTGTCCGAGCATGGAAACTGAAACCCCATACGTCAATAGGGCCG
TTCAACTCACTATTGGCAGCCTGGTTGGTAATGGAGGTTGTGGTTGATGCCTCCATCGCGGGCATTCTAATTTAC
AAACTTTCGATGTCGAAGACCGGGCATAAGAACTCGGACAGTGTCCTTAATAGACTGATCCGTATGTCGGTGCAA
ACGGGCTTTTGCACGGGAGTATTTGCTGTCTTATGTCTAATCTTTTTCTTCGTCATGCCCCGCACTCAATACTTT
GCGATGTTCGGTATACCGATCAGTCGTGTTTATACCATTACTTTCATGGATGCACTTCTAGGTCGTAGCGGGTTA
CGCGATCTACTATTTCTCGATCCGGATGAGGTGGGCCGTAGTGCAAGTCGAGGAGCACGTACTCTATCAGCCGCG
ATTCGTCTGCAAGTCACCAAAGAGGTTTACACCGTAACTGACAGAGAAGTATCTGAGCAAGCACATGAAATGAAG
GTTCACAGAGTGTAG
Transcript >AgabiH39|102060
ATGTTAGATATTGAGTCCACTTTGGGGGTTTTGTTAATTGGTGTATTCATTAATACCTACCTTTACGGTGTGGTT
TCATATCAATATGCGAAGTATTCGGTTACTTTCAAGAAAGACCCACATTGGGTTAAATTAATGGTCTTTGTTTTA
TTCCTAATGGACACTGTTCACAGTGCATCCATCATCTATATGGTCTGGACATTTGCCGTGAAGAGCTCTGAGGGG
GGCCCGGCTTCGACGAACGCGTATTGGCCGTACCCCTTTACAGTATTGGTTATGGTCTGCACAGCATGCATAGTT
CAGGGCTTCTTCACATATAGGATTTGGAAATTGACTTCCCAACATACTGTTGCATGTGCCCTTGCGGTACTGATA
GTAGGGGCTTTTGTCCTGGGCGTGACTGTCGCTGTCCGAGCATGGAAACTGAAACCCCATACGTCAATAGGGCCG
TTCAACTCACTATTGGCAGCCTGGTTGGTAATGGAGGTTGTGGTTGATGCCTCCATCGCGGGCATTCTAATTTAC
AAACTTTCGATGTCGAAGACCGGGCATAAGAACTCGGACAGTGTCCTTAATAGACTGATCCGTATGTCGGTGCAA
ACGGGCTTTTGCACGGGAGTATTTGCTGTCTTATGTCTAATCTTTTTCTTCGTCATGCCCCGCACTCAATACTTT
GCGATGTTCGGTATACCGATCAGTCGTGTTTATACCATTACTTTCATGGATGCACTTCTAGGTCGTAGCGGGTTA
CGCGATCTACTATTTCTCGATCCGGATGAGGTGGGCCGTAGTGCAAGTCGAGGAGCACGTACTCTATCAGCCGCG
ATTCGTCTGCAAGTCACCAAAGAGGTTTACACCGTAACTGACAGAGAAGTATCTGAGCAAGCACATGAAATGAAG
GTTCACAGAGTGTAG
Gene >AgabiH39|102060
ATGTTAGATATTGAGTCCACTTTGGGTGAGATAGTTGTGATTATTATATGGATATAAGTTTGGACTCCGGGCTTA
CTTGTGACAGGGGTTTTGTTAATTGGTGTATTCAGTGCGTGGATTTGAGCCAATAACGTGGTTATGATTCTAACT
TGATCTTATATAGTTAATACCTACCTTTACGGTGTGGTTTCATATCAATATGCGAAGTATTCGGTTACTTGTGAG
CCTTTGACCACATCTGCACCATTGAGGCCGCTAATAAGTCTGGTTGCAGTCAAGAAAGACCCACATTGGGTTAAG
TTAGTGAAGTGATATATCCGAAATATTGCGACGCTGATTCCATGAGATGCTCAGATTAATGGTCTTTGTTTTATT
CCTAATGGACACTGTTCACAGTGCATCGTATGTACACCTTTCAGCGATGGAAATCTATCCATTCAGTAATACTAA
TGAATTTTGCAAGCATCATCTATATGGTCTGGACATTTGCGTGAGTTTTTGCGCGGGATAAACTTTTGGTCAAAC
CGTCAAAGCTCATATTTATCGACAGCGTGAAGAGCTCTGAGGGGGGCCCGGCTTCGACGAGTATGTATGCTGCCC
CCATGCAAGATTCAGGCTGCTGACAACGTCCTAAGACGCGTATTGGCCGTACCCCTTTACAGTATTGGTTATGGT
CTGCACAGCATGCATAGTTCAGGGCTTCTTCACATATAGGTCTGTCCAGCTCCTTCGTTTAGCCGGACAAAAGAA
ATTGAATACACGAAGGATTTGGAAATTGACTTCCCAACATACTGTTGCATGTGCCCTTGCGGTACTGATAGTAGG
GGCTTTTGTCCTGGGCGTGACTGTCGCTGTCCGAGCATGGAAACTGAAACCGTTAGTTACCATGCCCAAGCCTGT
GCCAATGAAGTAACTGACGTCAGCGATAGCCATACGTCAATAGGGCCGTTCAACTCACTATTGGCAGCCTGGTTG
GTAATGGAGGTTGTGGTTGATGCCTCCATCGCGGGCATTCTAATTTACAAACTTTCGATGTCGAAGACCGGGCAT
AAGAACTCGGACAGTGTCCTTAATAGACTGATCCGTATGTCGGTGCAAACGGGTAAGGCTTTCTGCATTTGTCGA
TAAGAAGAGTGCGACCTGAAGACAATAATGTTATCCAGGCTTTTGCACGGGAGTATTTGCTGTCTTATGTCTAAT
CTTTTTCTTCGTCATGCCCCGCACTCAATACTTTGCGATGTTCGGTATACCGATCAGTCGTGTTTATACCATTGT
AAAGCATTCATATCGTCCAAGATGAATTATAATTAACGACATGCACAGACTTTCATGGATGCACTTCTAGGTCGT
AGCGGGTTACGCGATCTACTATTTCTCGATCCGGATGAGGTGAAACTTCGTTTCCAACGCTTCTTTTGGCAACAC
TCATGGTTCTTGCAGGTGGGCCGTAGTGCAAGTCGAGGAGCACGTACTCTATCAGCCGCGATTCGTCTGCAAGTC
ACCAAAGAGGTTTACACCGTAACTGACAGAGAAGTATCTGAGCAAGCACATGAAATGAAGGTTCACAGAGTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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