Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|099680
Gene name
Locationscaffold_07:643541..645167
Strand-
Gene length (bp)1626
Transcript length (bp)1431
Coding sequence length (bp)1431
Protein length (aa) 477

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 3.0E-08 57 132

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup244
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|016410
Agaricus bisporus var bisporus H39 AgabiH39|356900
Agaricus bisporus var bisporus H39 AgabiH39|099680 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|096020
Agaricus bisporus var bisporus H39 AgabiH39|096000
Agaricus bisporus var bisporus H39 AgabiH39|095890
Agaricus bisporus var bisporus H39 AgabiH39|095880
Agaricus bisporus var bisporus H39 AgabiH39|095450
Agaricus bisporus var bisporus H39 AgabiH39|086600
Agaricus bisporus var bisporus H39 AgabiH39|086590
Agaricus bisporus var bisporus H39 AgabiH39|357400
Agaricus bisporus var bisporus H39 AgabiH39|086500
Agaricus bisporus var bisporus H39 AgabiH39|029400
Agaricus bisporus var bisporus H39 AgabiH39|019480
Agaricus bisporus var bisporus H39 AgabiH39|019400
Agaricus bisporus var bisporus H39 AgabiH39|019380
Agaricus bisporus var bisporus H39 AgabiH39|019370
Agaricus bisporus var bisporus H39 AgabiH39|019360
Agaricus bisporus var bisporus H39 AgabiH39|016460
Agaricus bisporus var bisporus H39 AgabiH39|016450
Agaricus bisporus var bisporus H39 AgabiH39|086550
Agaricus bisporus var bisporus H97 AgabiH97|086590
Agaricus bisporus var bisporus H97 AgabiH97|086600
Agaricus bisporus var bisporus H97 AgabiH97|086950
Agaricus bisporus var bisporus H97 AgabiH97|096000
Agaricus bisporus var bisporus H97 AgabiH97|095880
Agaricus bisporus var bisporus H97 AgabiH97|095890
Agaricus bisporus var bisporus H97 AgabiH97|086550
Agaricus bisporus var bisporus H97 AgabiH97|095450
Agaricus bisporus var bisporus H97 AgabiH97|086500
Agaricus bisporus var bisporus H97 AgabiH97|019370
Agaricus bisporus var bisporus H97 AgabiH97|019480
Agaricus bisporus var bisporus H97 AgabiH97|019400
Agaricus bisporus var bisporus H97 AgabiH97|019380
Agaricus bisporus var bisporus H97 AgabiH97|019360
Agaricus bisporus var bisporus H97 AgabiH97|016460
Agaricus bisporus var bisporus H97 AgabiH97|016450
Agaricus bisporus var bisporus H97 AgabiH97|016410
Agaricus bisporus var bisporus H97 AgabiH97|096020
Agaricus bisporus var bisporus H97 AgabiH97|029400
Agaricus bisporus var bisporus H97 AgabiH97|099680

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|099680
MSAAECPRCGYHISTELKEGIPALQAEVHRLEDLMARLQEEKLVLLHRINNTQEKTGRLPFEVLSNIFLFARPPI
DFTAHEPTFYDDDDPNHPPVTGYHDPAEDFHHTLAAVSHRWRQVVLSTPQLWTSISLCVRNTFTEYRTSLLNLHF
KNARNLGVSILLDFSNPTLVWENISSRRSDFLMHLEPLVETIFEDNSDQPPALQFCDNLLANDFPLTLPATASSL
QLSHTDLHKSIRLLVESPNLVEFESYHHFTGSLVSQSNGKITKPIILHRLEKLTWDAQHIDDMHDFLRHVRFNNL
RTLQWYEGTRNDRTSEEGESLRLAFFSSLPSTLSSLIFDEIELDVPNILDLLSCVPQLTELHFINYRSWVVDDII
KAIGLSLADQGTPSSTLTVLPNLCVLSISGAKYWGMLEPFVFIELLETLHAAGPRPKPFHLITYSEVIWCSDALE
KVRALLSSGLDAKITFDVDGSKSEIS*
Coding >AgabiH39|099680
ATGTCCGCTGCAGAATGTCCTCGCTGTGGTTACCATATCTCGACAGAACTCAAGGAAGGAATCCCTGCCCTTCAA
GCTGAGGTCCACCGCCTGGAGGACCTGATGGCTCGCCTTCAAGAAGAGAAACTCGTCCTTTTGCATAGGATAAAC
AATACTCAAGAAAAAACGGGACGTCTACCGTTTGAAGTGCTGTCGAACATCTTCCTGTTTGCCCGTCCGCCCATT
GACTTCACCGCTCACGAGCCGACATTCTACGACGACGACGACCCAAACCATCCACCGGTTACAGGCTATCACGAT
CCAGCCGAGGACTTTCATCACACTTTGGCAGCTGTCTCTCATCGTTGGCGCCAGGTCGTGCTGTCAACACCACAA
CTCTGGACTTCGATCTCACTCTGCGTTCGTAATACGTTCACCGAATACAGAACGTCGCTCCTCAATCTACATTTC
AAAAACGCGCGTAACCTTGGAGTTTCCATTCTATTGGACTTCAGTAATCCTACCTTGGTGTGGGAGAACATTTCT
TCAAGGCGTTCAGACTTCCTTATGCATCTGGAGCCCCTTGTGGAAACCATATTCGAGGATAATTCTGACCAACCT
CCCGCGTTGCAATTCTGTGACAATTTACTGGCCAATGACTTTCCACTTACTTTGCCTGCTACAGCATCTTCTCTA
CAATTGTCCCACACCGATTTACACAAGTCCATTCGACTGCTCGTGGAATCACCAAATCTCGTTGAATTCGAGAGT
TATCATCACTTTACAGGATCTCTGGTTTCTCAGAGCAATGGGAAAATCACTAAACCCATAATACTCCATCGTCTC
GAAAAGTTGACATGGGATGCTCAGCACATAGACGATATGCATGACTTTCTGCGCCATGTTCGTTTTAATAACCTT
CGCACTCTACAATGGTATGAAGGCACGCGCAATGACCGCACTTCCGAAGAAGGCGAGAGTTTAAGACTTGCTTTC
TTTTCCTCACTGCCATCCACTCTTTCATCCCTAATCTTCGACGAGATTGAACTCGATGTTCCTAATATTCTCGAT
CTACTATCTTGTGTTCCTCAACTCACCGAACTCCATTTCATTAATTATCGTTCTTGGGTTGTTGACGATATTATT
AAGGCGATTGGCCTGTCCCTCGCGGATCAAGGGACGCCGTCTTCAACCTTGACGGTTCTGCCAAACCTTTGTGTT
TTGTCTATATCTGGCGCCAAATACTGGGGTATGCTCGAGCCGTTTGTATTCATTGAATTGCTGGAGACCCTACAT
GCTGCTGGCCCACGACCGAAACCATTCCACTTAATCACTTATTCCGAAGTTATTTGGTGTTCAGATGCCTTAGAG
AAGGTTCGGGCCCTATTGTCATCCGGTTTGGATGCAAAGATCACTTTCGATGTTGATGGATCCAAGTCAGAGATA
TCCTAA
Transcript >AgabiH39|099680
ATGTCCGCTGCAGAATGTCCTCGCTGTGGTTACCATATCTCGACAGAACTCAAGGAAGGAATCCCTGCCCTTCAA
GCTGAGGTCCACCGCCTGGAGGACCTGATGGCTCGCCTTCAAGAAGAGAAACTCGTCCTTTTGCATAGGATAAAC
AATACTCAAGAAAAAACGGGACGTCTACCGTTTGAAGTGCTGTCGAACATCTTCCTGTTTGCCCGTCCGCCCATT
GACTTCACCGCTCACGAGCCGACATTCTACGACGACGACGACCCAAACCATCCACCGGTTACAGGCTATCACGAT
CCAGCCGAGGACTTTCATCACACTTTGGCAGCTGTCTCTCATCGTTGGCGCCAGGTCGTGCTGTCAACACCACAA
CTCTGGACTTCGATCTCACTCTGCGTTCGTAATACGTTCACCGAATACAGAACGTCGCTCCTCAATCTACATTTC
AAAAACGCGCGTAACCTTGGAGTTTCCATTCTATTGGACTTCAGTAATCCTACCTTGGTGTGGGAGAACATTTCT
TCAAGGCGTTCAGACTTCCTTATGCATCTGGAGCCCCTTGTGGAAACCATATTCGAGGATAATTCTGACCAACCT
CCCGCGTTGCAATTCTGTGACAATTTACTGGCCAATGACTTTCCACTTACTTTGCCTGCTACAGCATCTTCTCTA
CAATTGTCCCACACCGATTTACACAAGTCCATTCGACTGCTCGTGGAATCACCAAATCTCGTTGAATTCGAGAGT
TATCATCACTTTACAGGATCTCTGGTTTCTCAGAGCAATGGGAAAATCACTAAACCCATAATACTCCATCGTCTC
GAAAAGTTGACATGGGATGCTCAGCACATAGACGATATGCATGACTTTCTGCGCCATGTTCGTTTTAATAACCTT
CGCACTCTACAATGGTATGAAGGCACGCGCAATGACCGCACTTCCGAAGAAGGCGAGAGTTTAAGACTTGCTTTC
TTTTCCTCACTGCCATCCACTCTTTCATCCCTAATCTTCGACGAGATTGAACTCGATGTTCCTAATATTCTCGAT
CTACTATCTTGTGTTCCTCAACTCACCGAACTCCATTTCATTAATTATCGTTCTTGGGTTGTTGACGATATTATT
AAGGCGATTGGCCTGTCCCTCGCGGATCAAGGGACGCCGTCTTCAACCTTGACGGTTCTGCCAAACCTTTGTGTT
TTGTCTATATCTGGCGCCAAATACTGGGGTATGCTCGAGCCGTTTGTATTCATTGAATTGCTGGAGACCCTACAT
GCTGCTGGCCCACGACCGAAACCATTCCACTTAATCACTTATTCCGAAGTTATTTGGTGTTCAGATGCCTTAGAG
AAGGTTCGGGCCCTATTGTCATCCGGTTTGGATGCAAAGATCACTTTCGATGTTGATGGATCCAAGTCAGAGATA
TCCTAA
Gene >AgabiH39|099680
ATGTCCGCTGCAGAATGTCCTCGCTGTGGTTACCATATCTCGACAGAACTCAAGGTATGCTATGCTGCCCTTGAC
ATTCATCCCGCAAACAACGCTGCTGACGGGGATCACCAGGAAGGAATCCCTGCCCTTCAAGCTGAGGTCCACCGC
CTGGAGGACCTGATGGCTCGCCTTCAAGAAGAGAAACTCGTCCTTTTGCATAGGATAAACAATACTCAAGAAAAA
ACGGGACGTCTACCGTTTGAAGTGCTGTCGAACATCTTCCTGTTTGCCCGTCCGCCCATTGACTTCACCGCTCAC
GAGCCGACATTCTACGACGACGACGACCCAAACCATCCACCGGTTACAGGCTATCACGATCCAGCCGAGGACTTT
CATCACACTTTGGCAGCTGTCTCTCATCGTTGGCGCCAGGTCGTGCTGTCAACACCACAACTCTGGACTTCGATC
TCACTCTGCGTTCGTAATACGTTCACCGAATACAGAACGTCGCTCCTCAATCTACATTTCAAAAACGCGCGTAAC
CTTGGAGTTTCCATTCTATTGGACTTCAGTAATCCTACCTTGGTGTGGGAGAACATTTCTTCAAGGCGTTCAGAC
TTCCTTATGCATCTGGAGCCCCTTGTGGAAACCATATTCGAGGATAATTCTGACCAAGTACGAAGCCTCTTTCTC
ATCCAGCCACCAGCTGAATGGTCGTCTTTTATGTGCGGCAGCCTCCCGCGTTGCAATTCTGTGACAATTTACTGG
CCAAGTTCGGAGCCTTATTGCAATTACTTCTTCAATTTCCATGATCTTCCTTGTCTCCGGCATGTGAAGCTGGTC
GGCAGTGACTTTCCACTTACTTTGCCTGCTACAGCATCTTCTCTACAATTGTCCCACACCGATTTACACAAGTCC
ATTCGACTGCTCGTGGAATCACCAAATCTCGTTGAATTCGAGAGTTATCATCACTTTACAGGATCTCTGGTTTCT
CAGAGCAATGGGAAAATCACTAAACCCATAATACTCCATCGTCTCGAAAAGTTGACATGGGATGCTCAGCACATA
GACGATATGCATGACTTTCTGCGCCATGTTCGTTTTAATAACCTTCGCACTCTACAATGGTATGAAGGCACGCGC
AATGACCGCACTTCCGAAGAAGGCGAGAGTTTAAGACTTGCTTTCTTTTCCTCACTGCCATCCACTCTTTCATCC
CTAATCTTCGACGAGATTGAACTCGATGTTCCTAATATTCTCGATCTACTATCTTGTGTTCCTCAACTCACCGAA
CTCCATTTCATTAATTATCGTTCTTGGGTTGTTGACGATATTATTAAGGCGATTGGCCTGTCCCTCGCGGATCAA
GGGACGCCGTCTTCAACCTTGACGGTTCTGCCAAACCTTTGTGTTTTGTCTATATCTGGCGCCAAATACTGGGGT
ATGCTCGAGCCGTTTGTATTCATTGAATTGCTGGAGACCCTACATGCTGCTGGCCCACGACCGAAACCATTCCAC
TTAATCACTTATTCCGAAGTTATTTGGTGTTCAGATGCCTTAGAGAAGGTTCGGGCCCTATTGTCATCCGGTTTG
GATGCAAAGATCACTTTCGATGTTGATGGATCCAAGTCAGAGATATCCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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