Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|099490
Gene name
Locationscaffold_07:598896..600465
Strand+
Gene length (bp)1569
Transcript length (bp)1272
Coding sequence length (bp)1272
Protein length (aa) 424

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 2.7E-06 12 53
PF00646 F-box F-box domain 9.6E-05 13 51

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup1593
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|016750
Agaricus bisporus var bisporus H39 AgabiH39|049060
Agaricus bisporus var bisporus H39 AgabiH39|099480
Agaricus bisporus var bisporus H39 AgabiH39|099490 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|099500
Agaricus bisporus var bisporus H39 AgabiH39|400700
Agaricus bisporus var bisporus H39 AgabiH39|400800
Agaricus bisporus var bisporus H97 AgabiH97|016680
Agaricus bisporus var bisporus H97 AgabiH97|016750
Agaricus bisporus var bisporus H97 AgabiH97|049060
Agaricus bisporus var bisporus H97 AgabiH97|099480
Agaricus bisporus var bisporus H97 AgabiH97|099490
Agaricus bisporus var bisporus H97 AgabiH97|099500
Agaricus bisporus var bisporus H97 AgabiH97|099810
Agaricus bisporus var bisporus H97 AgabiH97|099830

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|099490
MEDTHQAVQGLTSLPTEVLSRILIHVDGSDISALQQTCQTLHSVTMTRQFWYNRIHRLCEKHVCPPEEELEEYST
AELKQWTMRRIHARSTSPVKLQLRTGRDPSLLIGFHENTFLIPGGRWLLKPHSNLTIYFVDLDSSNLKLHPLTAI
NVPLSRLPCRLKEVRATLVAQIIATFRCRERDTGFTHAFNNRYFAQGRGDYLLTEPAVEIFDYRQALGCFNYPTL
MDSHTLPLSEDCSTHLEFINEDVLAIYCDVTDTYHIFNIESPTSFKLLHEIKLPVLPFDFSRTYWTPEASLMTFT
SPTFSTLIQRNMERIYGLVIPHDSKLRPWTVEIGRFIGSKKGYFTFKPGIFISLLYNSETGTNSRLFHEWNYTCE
SSCSEPTPISPLEQEVDQFWLPSAFDEDTGRSVSFQSHKLRVADFASL*
Coding >AgabiH39|099490
ATGGAAGACACTCATCAAGCTGTTCAAGGACTCACATCACTTCCCACTGAGGTGCTCTCGCGGATCCTTATACAT
GTGGATGGCTCAGACATATCCGCTCTCCAGCAAACATGCCAAACTTTGCATTCTGTTACAATGACACGGCAATTT
TGGTATAATCGTATACATCGGCTCTGCGAAAAACACGTCTGCCCACCTGAAGAAGAGTTAGAAGAATACTCTACA
GCTGAACTCAAGCAATGGACCATGCGACGAATCCATGCTAGGAGTACTTCGCCTGTGAAGTTACAGCTTCGCACT
GGTCGAGATCCCTCCCTGCTTATCGGATTTCACGAGAATACATTTCTCATTCCAGGTGGTCGATGGCTTCTAAAA
CCTCATAGCAATCTGACCATATACTTCGTCGACTTGGACAGCAGTAATCTAAAACTACACCCACTCACCGCGATT
AACGTTCCGCTTTCAAGGCTCCCTTGTCGACTCAAGGAGGTCCGTGCGACTCTCGTGGCTCAAATTATTGCTACG
TTTCGTTGTAGGGAGCGCGATACTGGTTTTACACATGCCTTTAATAATCGTTATTTTGCTCAAGGCCGAGGAGAT
TACTTGTTGACGGAACCGGCGGTGGAGATTTTCGATTATAGGCAAGCCTTGGGATGCTTTAATTATCCGACTTTG
ATGGACAGCCATACCCTTCCCCTCAGTGAAGATTGCTCTACCCATTTGGAGTTCATCAACGAGGACGTTCTTGCT
ATCTACTGCGACGTAACAGATACCTATCATATCTTCAACATAGAGTCACCAACGTCGTTCAAGCTTTTGCATGAA
ATCAAACTGCCTGTGTTACCATTTGACTTTTCCAGGACCTATTGGACACCTGAAGCCTCGCTGATGACATTCACC
TCGCCCACATTTTCCACTCTTATCCAAAGAAATATGGAAAGAATTTATGGGCTTGTTATACCTCATGACAGCAAG
CTTCGTCCATGGACGGTCGAGATAGGAAGATTCATAGGAAGCAAGAAGGGGTACTTCACCTTCAAGCCTGGTATT
TTCATCTCACTGTTGTATAACTCCGAGACAGGCACAAATTCACGCCTTTTTCACGAATGGAACTACACATGTGAA
TCATCCTGTAGTGAACCGACTCCTATATCGCCTCTGGAGCAGGAGGTTGATCAGTTTTGGTTACCCAGTGCCTTT
GATGAAGATACAGGGCGCTCAGTATCTTTTCAGAGTCATAAACTGCGAGTGGCCGACTTTGCATCGTTGTAG
Transcript >AgabiH39|099490
ATGGAAGACACTCATCAAGCTGTTCAAGGACTCACATCACTTCCCACTGAGGTGCTCTCGCGGATCCTTATACAT
GTGGATGGCTCAGACATATCCGCTCTCCAGCAAACATGCCAAACTTTGCATTCTGTTACAATGACACGGCAATTT
TGGTATAATCGTATACATCGGCTCTGCGAAAAACACGTCTGCCCACCTGAAGAAGAGTTAGAAGAATACTCTACA
GCTGAACTCAAGCAATGGACCATGCGACGAATCCATGCTAGGAGTACTTCGCCTGTGAAGTTACAGCTTCGCACT
GGTCGAGATCCCTCCCTGCTTATCGGATTTCACGAGAATACATTTCTCATTCCAGGTGGTCGATGGCTTCTAAAA
CCTCATAGCAATCTGACCATATACTTCGTCGACTTGGACAGCAGTAATCTAAAACTACACCCACTCACCGCGATT
AACGTTCCGCTTTCAAGGCTCCCTTGTCGACTCAAGGAGGTCCGTGCGACTCTCGTGGCTCAAATTATTGCTACG
TTTCGTTGTAGGGAGCGCGATACTGGTTTTACACATGCCTTTAATAATCGTTATTTTGCTCAAGGCCGAGGAGAT
TACTTGTTGACGGAACCGGCGGTGGAGATTTTCGATTATAGGCAAGCCTTGGGATGCTTTAATTATCCGACTTTG
ATGGACAGCCATACCCTTCCCCTCAGTGAAGATTGCTCTACCCATTTGGAGTTCATCAACGAGGACGTTCTTGCT
ATCTACTGCGACGTAACAGATACCTATCATATCTTCAACATAGAGTCACCAACGTCGTTCAAGCTTTTGCATGAA
ATCAAACTGCCTGTGTTACCATTTGACTTTTCCAGGACCTATTGGACACCTGAAGCCTCGCTGATGACATTCACC
TCGCCCACATTTTCCACTCTTATCCAAAGAAATATGGAAAGAATTTATGGGCTTGTTATACCTCATGACAGCAAG
CTTCGTCCATGGACGGTCGAGATAGGAAGATTCATAGGAAGCAAGAAGGGGTACTTCACCTTCAAGCCTGGTATT
TTCATCTCACTGTTGTATAACTCCGAGACAGGCACAAATTCACGCCTTTTTCACGAATGGAACTACACATGTGAA
TCATCCTGTAGTGAACCGACTCCTATATCGCCTCTGGAGCAGGAGGTTGATCAGTTTTGGTTACCCAGTGCCTTT
GATGAAGATACAGGGCGCTCAGTATCTTTTCAGAGTCATAAACTGCGAGTGGCCGACTTTGCATCGTTGTAG
Gene >AgabiH39|099490
ATGGAAGACACTCATCAAGCTGTTCAAGGACTCACATCACTTCCCACTGAGGTGCTCTCGCGGATCCTTATACAT
GTGGATGGCTCAGACATATCCGCTCTCCAGCAAGTGCGTTTTGTCTCCCCTTCTTGTTGCAAACGAGTGGATATC
TGATATTTAGAAGACATGCCAAACTTTGCATTCTGTTACAATGACACGGCAATTTTGGTATAATCGTATACATCG
GCTCTGCGAAAAACACGTCTGCCCACCTGAAGAAGAGTTAGAAGAATACTCTACAGCTGAACTCAAGCAATGGAC
CATGCGACGAATCCATGCTAGGAGTACTTCGCCTGTGAAGTTACAGCTTCGCACTGGTCGAGATCCCTCCCTGCT
TATCGGATTTCACGAGAATACATTTCTCATTCCAGGTGGTCGATGGCTTCTAAAACCTCATAGCAATCTGACCAT
ATACTTCGTCGACTTGGACAGCAGTAATCTAAAACTACACCCACTGTTAGATCCCAAGAAGGATAACCCATGCGT
CAGCAATCATAAAACTGTCGGATATCGCATATTGATAGACCATAAAGCACCGCGATTAACGTTCCGCTTTCAAGG
CTCCCTTGTCGACTCAAGTGCGTCAGTCAAGTGTCATATCCAGCGGGACTTACTGCCTCTCAGGGAGGTCCGGTG
ATCTACCGTTTACCTATGCGTATATCTACCAGGTTGATCTGATTGGTCATGGTGCCAGTGCGACTCTCGTGGCTC
AAATTATTGCTACGTTTCGTTGTAGGGAGCGCGATACTGGTTTTACACATGCCTTTAATAATCGTTATTTTGCTC
AAGGCCGAGGAGATTACTTGTTGACGGAACCGGCGGTGGAGATTTTCGATTATAGGCAAGCCTTGGGATGCTTTA
ATTATCCGACTTTGATGGACAGCCATACCCTTCCCCTCAGTGAAGATTGCTCTACCGTATGTGCATTCTCTGAAC
TTGGCTCGTACTTCTATTCATATCAATTCTTACGAACAGCATTTGGAGTTCATCAACGAGGACGTTCTTGCTATC
TACTGCGACGTAACAGATACCTATCATATCTTCAACATAGAGTCACCAACGTCGTTCAAGCTTTTGCATGAAATC
AAACTGCCTGTGTTACCATTTGACTTTTCCAGGACCTATTGGACACCTGAAGCCTCGCTGATGACATTCACCTCG
CCCACATTTTCCACTCTTATCCAAAGAAATATGGAAAGAATTTATGGGCTTGTTATACCTCATGACAGCAAGCTT
CGTCCATGGACGGTCGAGATAGGAAGATTCATAGGAAGCAAGAAGGGGTACTTCACCTTCAAGCCTGGTATTTTC
ATCTCACTGTTGTATAACTCCGAGACAGGCACAAATTCACGCCTTTTTCACGAATGGAACTACACATGTGAATCA
TCCTGTAGTGAACCGACTCCTATATCGCCTCTGGAGCAGGAGGTTGATCAGTTTTGGTTACCCAGTGCCTTTGAT
GAAGATACAGGGCGCTCAGTATCTTTTCAGAGTCATAAACTGCGAGTGGCCGACTTTGCATCGTTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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