Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|099480
Gene name
Locationscaffold_07:596798..598366
Strand+
Gene length (bp)1568
Transcript length (bp)1410
Coding sequence length (bp)1410
Protein length (aa) 470

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 6.6E-06 14 54
PF00646 F-box F-box domain 3.2E-05 14 47

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup1593
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|016750
Agaricus bisporus var bisporus H39 AgabiH39|049060
Agaricus bisporus var bisporus H39 AgabiH39|099480 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|099490
Agaricus bisporus var bisporus H39 AgabiH39|099500
Agaricus bisporus var bisporus H39 AgabiH39|400700
Agaricus bisporus var bisporus H39 AgabiH39|400800
Agaricus bisporus var bisporus H97 AgabiH97|016680
Agaricus bisporus var bisporus H97 AgabiH97|016750
Agaricus bisporus var bisporus H97 AgabiH97|049060
Agaricus bisporus var bisporus H97 AgabiH97|099480
Agaricus bisporus var bisporus H97 AgabiH97|099490
Agaricus bisporus var bisporus H97 AgabiH97|099500
Agaricus bisporus var bisporus H97 AgabiH97|099810
Agaricus bisporus var bisporus H97 AgabiH97|099830

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|099480
MSGYTDHWDVQGLTSLPIEILSRIFMYVDSSDIPALQQTCQTLRSVTMARQFWYDRIHRLCKEHVVYPPEEELEE
YSIVELEQWTMRRIRARSTSPVKIQLRSQDLPMPLFFGKTFLSPGGRWLIKFHYDLRVYFVDLDSSNLELHLLLD
PKKDDPRISSNHQGLGFGTRIWIDHKAPRLSFRFQGCIADTEGDPPFTRVYIYQVDLIGHGANATLVAQIIATFQ
CPKARKPRFLNALNDRYYVQGRGYQSFTDAGLEIFDYRRALGCFDYPKLMDSYTLPLSEDCSTHLEFISGNILAI
YCKPTTSYHIFNIESPTSFNLLHEIKLPEGIDGLSRTYWTPEASLITFCSPIHLAMLERIYGLVIPHDSKLCPWT
IQLDGFSGSRNGHMTFGPGIFISLLCNYKTDTISRFDHEWDYTCQSPGNGPTRTSYLEQDVDQLGKLIAFDEDTG
RSVHFNNGKLKVLDMVIRG*
Coding >AgabiH39|099480
ATGTCAGGATATACTGATCACTGGGATGTCCAAGGACTCACGTCACTGCCCATCGAGATCCTCTCTCGGATCTTC
ATGTATGTGGACAGCTCAGACATACCCGCTCTTCAGCAAACGTGCCAAACTTTGCGTTCCGTTACAATGGCACGG
CAGTTTTGGTATGATCGTATTCATCGACTATGCAAAGAACATGTCGTCTATCCACCTGAAGAAGAATTAGAAGAG
TATTCTATAGTTGAACTCGAGCAATGGACCATGCGACGAATTCGTGCTAGGAGTACTTCCCCCGTGAAAATACAA
CTTCGCAGTCAAGATTTACCCATGCCTCTTTTTTTCGGGAAGACGTTTCTCTCTCCAGGTGGTCGATGGCTTATA
AAATTTCATTACGATCTGCGCGTATACTTCGTCGACTTGGACAGCAGCAATCTAGAACTCCACCTGCTGTTAGAT
CCTAAAAAGGACGACCCACGCATCAGCAGCAATCATCAAGGTTTAGGTTTTGGAACACGTATATGGATAGACCAT
AAAGCACCGCGATTGTCTTTCCGCTTTCAAGGTTGCATCGCTGATACTGAGGGCGATCCTCCGTTTACCCGGGTG
TATATCTATCAGGTCGATCTGATTGGCCATGGTGCCAACGCAACTCTCGTGGCTCAGATCATTGCTACCTTTCAA
TGCCCCAAGGCGAGAAAACCACGTTTTTTAAATGCCCTCAATGATCGCTATTATGTCCAAGGTCGAGGATACCAG
TCTTTCACAGATGCGGGGTTGGAAATTTTCGATTATAGGCGAGCCTTGGGATGCTTTGATTACCCGAAGTTGATG
GACAGTTATACCCTTCCCCTCAGTGAAGATTGTTCTACCCACTTGGAGTTCATCAGCGGCAACATTCTCGCTATC
TACTGCAAACCCACAACCTCCTATCACATCTTCAACATAGAATCACCAACCTCGTTCAATCTTTTGCATGAAATC
AAACTGCCTGAGGGTATAGATGGCCTTTCCAGGACCTATTGGACACCTGAAGCGTCACTGATCACTTTCTGCTCG
CCCATACATCTTGCCATGCTCGAAAGAATTTATGGACTCGTCATACCTCACGACAGCAAGCTTTGTCCGTGGACA
ATCCAGCTGGATGGTTTTTCAGGAAGCCGGAACGGGCACATGACCTTCGGGCCTGGTATTTTCATCTCACTGCTG
TGTAATTATAAGACAGATACGATTTCGCGCTTTGATCATGAATGGGACTACACATGTCAATCGCCAGGTAATGGA
CCAACCCGTACATCATATCTCGAGCAGGATGTGGATCAGCTGGGGAAACTCATCGCGTTTGATGAAGATACGGGG
CGCTCTGTTCATTTTAACAATGGAAAACTGAAAGTACTCGATATGGTTATAAGGGGTTGA
Transcript >AgabiH39|099480
ATGTCAGGATATACTGATCACTGGGATGTCCAAGGACTCACGTCACTGCCCATCGAGATCCTCTCTCGGATCTTC
ATGTATGTGGACAGCTCAGACATACCCGCTCTTCAGCAAACGTGCCAAACTTTGCGTTCCGTTACAATGGCACGG
CAGTTTTGGTATGATCGTATTCATCGACTATGCAAAGAACATGTCGTCTATCCACCTGAAGAAGAATTAGAAGAG
TATTCTATAGTTGAACTCGAGCAATGGACCATGCGACGAATTCGTGCTAGGAGTACTTCCCCCGTGAAAATACAA
CTTCGCAGTCAAGATTTACCCATGCCTCTTTTTTTCGGGAAGACGTTTCTCTCTCCAGGTGGTCGATGGCTTATA
AAATTTCATTACGATCTGCGCGTATACTTCGTCGACTTGGACAGCAGCAATCTAGAACTCCACCTGCTGTTAGAT
CCTAAAAAGGACGACCCACGCATCAGCAGCAATCATCAAGGTTTAGGTTTTGGAACACGTATATGGATAGACCAT
AAAGCACCGCGATTGTCTTTCCGCTTTCAAGGTTGCATCGCTGATACTGAGGGCGATCCTCCGTTTACCCGGGTG
TATATCTATCAGGTCGATCTGATTGGCCATGGTGCCAACGCAACTCTCGTGGCTCAGATCATTGCTACCTTTCAA
TGCCCCAAGGCGAGAAAACCACGTTTTTTAAATGCCCTCAATGATCGCTATTATGTCCAAGGTCGAGGATACCAG
TCTTTCACAGATGCGGGGTTGGAAATTTTCGATTATAGGCGAGCCTTGGGATGCTTTGATTACCCGAAGTTGATG
GACAGTTATACCCTTCCCCTCAGTGAAGATTGTTCTACCCACTTGGAGTTCATCAGCGGCAACATTCTCGCTATC
TACTGCAAACCCACAACCTCCTATCACATCTTCAACATAGAATCACCAACCTCGTTCAATCTTTTGCATGAAATC
AAACTGCCTGAGGGTATAGATGGCCTTTCCAGGACCTATTGGACACCTGAAGCGTCACTGATCACTTTCTGCTCG
CCCATACATCTTGCCATGCTCGAAAGAATTTATGGACTCGTCATACCTCACGACAGCAAGCTTTGTCCGTGGACA
ATCCAGCTGGATGGTTTTTCAGGAAGCCGGAACGGGCACATGACCTTCGGGCCTGGTATTTTCATCTCACTGCTG
TGTAATTATAAGACAGATACGATTTCGCGCTTTGATCATGAATGGGACTACACATGTCAATCGCCAGGTAATGGA
CCAACCCGTACATCATATCTCGAGCAGGATGTGGATCAGCTGGGGAAACTCATCGCGTTTGATGAAGATACGGGG
CGCTCTGTTCATTTTAACAATGGAAAACTGAAAGTACTCGATATGGTTATAAGGGGTTGA
Gene >AgabiH39|099480
ATGTCAGGATATACTGATCACTGGGATGTCCAAGGACTCACGTCACTGCCCATCGAGATCCTCTCTCGGATCTTC
ATGTATGTGGACAGCTCAGACATACCCGCTCTTCAGCAAGTGCGTTTTGTCGCCATTTTTCTTGCAAACGAGCGA
TGACTGATATTTAGAAGACGTGCCAAACTTTGCGTTCCGTTACAATGGCACGGCAGTTTTGGTATGATCGTATTC
ATCGACTATGCAAAGAACATGTCGTCTATCCACCTGAAGAAGAATTAGAAGAGTATTCTATAGTTGAACTCGAGC
AATGGACCATGCGACGAATTCGTGCTAGGAGTACTTCCCCCGTGAAAATACAACTTCGCAGTCAAGATTTACCCA
TGCCTCTTTTTTTCGGGAAGACGTTTCTCTCTCCAGGTGGTCGATGGCTTATAAAATTTCATTACGATCTGCGCG
TATACTTCGTCGACTTGGACAGCAGCAATCTAGAACTCCACCTGCTGTTAGATCCTAAAAAGGACGACCCACGCA
TCAGCAGCAATCATCAAGGTTTAGGTTTTGGAACACGTATATGGATAGACCATAAAGCACCGCGATTGTCTTTCC
GCTTTCAAGGTTGCATCGCTGATACTGGTATGTTGGTTGAGTGTCATATCCAACGGGACTTACTGGTGCTCAGAG
GGCGATCCTCCGTTTACCCGGGTGTATATCTATCAGGTCGATCTGATTGGCCATGGTGCCAACGCAACTCTCGTG
GCTCAGATCATTGCTACCTTTCAATGCCCCAAGGCGAGAAAACCACGTTTTTTAAATGCCCTCAATGATCGCTAT
TATGTCCAAGGTCGAGGATACCAGTCTTTCACAGATGCGGGGTTGGAAATTTTCGATTATAGGCGAGCCTTGGGA
TGCTTTGATTACCCGAAGTTGATGGACAGTTATACCCTTCCCCTCAGTGAAGATTGTTCTACCGTCTGTGTTTTC
TATGGTTATGGCTCATACTTTCACTCACATTGAAGTCTTATGCACAGCACTTGGAGTTCATCAGCGGCAACATTC
TCGCTATCTACTGCAAACCCACAACCTCCTATCACATCTTCAACATAGAATCACCAACCTCGTTCAATCTTTTGC
ATGAAATCAAACTGCCTGAGGGTATAGATGGCCTTTCCAGGACCTATTGGACACCTGAAGCGTCACTGATCACTT
TCTGCTCGCCCATACATCTTGCCATGCTCGAAAGAATTTATGGACTCGTCATACCTCACGACAGCAAGCTTTGTC
CGTGGACAATCCAGCTGGATGGTTTTTCAGGAAGCCGGAACGGGCACATGACCTTCGGGCCTGGTATTTTCATCT
CACTGCTGTGTAATTATAAGACAGATACGATTTCGCGCTTTGATCATGAATGGGACTACACATGTCAATCGCCAG
GTAATGGACCAACCCGTACATCATATCTCGAGCAGGATGTGGATCAGCTGGGGAAACTCATCGCGTTTGATGAAG
ATACGGGGCGCTCTGTTCATTTTAACAATGGAAAACTGAAAGTACTCGATATGGTTATAAGGGGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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