Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|095970
Gene name
Locationscaffold_06b:468275..470382
Strand-
Gene length (bp)2107
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 2.0E-15 177 264

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 62 84 22
3 99 121 22
4 133 155 22
5 170 192 22
6 213 235 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|095970
MSTTVATAPSPSPTFFPPPNVQLSYGPMLIGVFVNMILYGILLSQTFSYYRLYKSDALWIKCLVLYLFIVETANT
GIDMVMMYQPLILEYGHKLDAFPVMFAAEPITIVAISMPIQLFFAWRIFRLTKQSIIAIVISILSLVSFAGGLWT
TIKIIIIKSFSRKPELHWSALVWFLAATVADVLITVTLVINLSKRKTGFSATDDAISKIIRMTVQTGMLTALFAI
GDVVFFMTLGKTALNFIWDLALTKIYANCLMSTLNARASLKEMTSGHSNQRHFSSTPRSSRRLNTTTDPMSPLRV
QSHMFELGNVSYEKSSRSQYDDPEYGITVTRVVETIPDQESRKPQAVAL*
Coding >AgabiH39|095970
ATGTCTACTACTGTGGCCACGGCTCCTTCACCATCCCCAACGTTCTTTCCTCCACCCAACGTGCAATTATCGTAT
GGACCGATGCTGATTGGAGTCTTCGTGAATATGATATTATATGGAATTCTATTATCTCAGACTTTTTCGTACTAC
CGGCTGTACAAGAGTGACGCACTTTGGATCAAGTGTTTGGTGCTCTATCTCTTTATTGTTGAGACGGCGAATACG
GGGATAGATATGGTGATGATGTATCAGCCTCTCATATTGGAGTATGGACACAAACTAGACGCGTTCCCAGTCATG
TTCGCTGCTGAACCGATAACCATTGTTGCGATTTCTATGCCTATCCAGCTCTTTTTTGCCTGGAGAATTTTTCGT
CTCACGAAACAGTCAATCATTGCTATCGTCATTTCGATACTATCACTCGTTTCTTTTGCTGGTGGTCTATGGACA
ACTATTAAGATCATTATCATCAAATCATTCAGCCGTAAACCTGAACTTCACTGGTCTGCTCTTGTATGGTTTCTT
GCAGCAACCGTCGCGGATGTTCTCATCACTGTAACACTTGTGATAAACTTGTCAAAACGTAAAACAGGATTCTCC
GCGACAGACGACGCTATTTCGAAAATTATTCGAATGACGGTCCAAACTGGCATGCTAACTGCCCTCTTCGCAATT
GGAGATGTTGTCTTCTTCATGACTCTTGGGAAAACCGCTTTGAATTTCATTTGGGACCTAGCTCTGACTAAGATT
TACGCGAATTGCCTAATGTCTACTTTGAATGCCCGCGCTTCTCTGAAGGAAATGACAAGCGGTCATTCAAATCAG
CGCCATTTCTCAAGTACACCTAGAAGCAGTAGACGGCTTAACACAACCACAGATCCCATGTCACCACTCCGCGTT
CAATCACATATGTTTGAGCTTGGCAATGTATCATACGAAAAATCATCGCGTTCGCAGTATGATGACCCTGAGTAC
GGCATAACTGTGACAAGGGTCGTGGAGACAATCCCAGATCAAGAGTCGAGGAAACCACAGGCTGTCGCTCTTTAG
Transcript >AgabiH39|095970
ATGTCTACTACTGTGGCCACGGCTCCTTCACCATCCCCAACGTTCTTTCCTCCACCCAACGTGCAATTATCGTAT
GGACCGATGCTGATTGGAGTCTTCGTGAATATGATATTATATGGAATTCTATTATCTCAGACTTTTTCGTACTAC
CGGCTGTACAAGAGTGACGCACTTTGGATCAAGTGTTTGGTGCTCTATCTCTTTATTGTTGAGACGGCGAATACG
GGGATAGATATGGTGATGATGTATCAGCCTCTCATATTGGAGTATGGACACAAACTAGACGCGTTCCCAGTCATG
TTCGCTGCTGAACCGATAACCATTGTTGCGATTTCTATGCCTATCCAGCTCTTTTTTGCCTGGAGAATTTTTCGT
CTCACGAAACAGTCAATCATTGCTATCGTCATTTCGATACTATCACTCGTTTCTTTTGCTGGTGGTCTATGGACA
ACTATTAAGATCATTATCATCAAATCATTCAGCCGTAAACCTGAACTTCACTGGTCTGCTCTTGTATGGTTTCTT
GCAGCAACCGTCGCGGATGTTCTCATCACTGTAACACTTGTGATAAACTTGTCAAAACGTAAAACAGGATTCTCC
GCGACAGACGACGCTATTTCGAAAATTATTCGAATGACGGTCCAAACTGGCATGCTAACTGCCCTCTTCGCAATT
GGAGATGTTGTCTTCTTCATGACTCTTGGGAAAACCGCTTTGAATTTCATTTGGGACCTAGCTCTGACTAAGATT
TACGCGAATTGCCTAATGTCTACTTTGAATGCCCGCGCTTCTCTGAAGGAAATGACAAGCGGTCATTCAAATCAG
CGCCATTTCTCAAGTACACCTAGAAGCAGTAGACGGCTTAACACAACCACAGATCCCATGTCACCACTCCGCGTT
CAATCACATATGTTTGAGCTTGGCAATGTATCATACGAAAAATCATCGCGTTCGCAGTATGATGACCCTGAGTAC
GGCATAACTGTGACAAGGGTCGTGGAGACAATCCCAGATCAAGAGTCGAGGAAACCACAGGCTGTCGCTCTTTAG
Gene >AgabiH39|095970
ATGTCTACTACTGTGGCCACGGCTCCTTCACCATCCCCAACGTTCTTTCCTCCACCCAACGTGCAATTATCGTAA
GTTTTATGTCGTATGACTTACTTATGTCTAACATAGGTTCAGGTATGGACCGATGCTGATTGGAGTCTTCGTGAA
TATGATATTATATGGAGTATGTGCCATGACCTCCGAGGACGATGACAAAATTGACCCTTGTGCCTAGATTCTATT
ATCTCAGGTACCTTGGCGAATCTTATTCTGGGTATTCAGCGCTCATGACGATCCGCTTCGCCACAGACTTTTTCG
TACTACCGGCTGTACAAGAGGTATGATACTTCTCTACTCTTGTTATCGAGCTGACACTTGACTTTAAACAGTGAC
GCACTTTGGATCAAGTGTTTGGTGAGCTTTCGAGCGAACATTCAAGGATCATCCCGACTCAACGTACTATTAGGT
GCTCTATCTCTTTATTGTTGAGACGGCGAATACGGGGATAGATATGGTGATGATGTATCAGCCTCTCATATTGGA
GTATGGTCCGTCATTTCACACTTTCTGGTGTATAGGCATTTAGACTCGCAACAGGACACAAACTAGACGCGTTCC
CAGTCAGTAAGTGCTTGAAAATTATATCCCGTTGACTGATTTAAGATTAATTATCGTCCGATACAGTGTTCGCTG
CTGGTGCGCAAGCTCCATTTCCTTTTTTTCAGCATTTCATGTCTCTATGTTTCTATTGTACCTCTAGAACCGATA
ACCATTGTAAGCTAAGCCCTCTCATGCCCCGTGTACTGAGAACTTGACTAGTTATCGAAGGTTGCGATTTCTATG
CCTATCCAGCTCTTTTTTGCCTGGAGAATTTTTCGTCTCACGAAACAGTCAATCATTGCTATCGTCATTTCGATA
CTATCACTCGTTTCTTTTGGTATGTGCCTTGAAGTCTTTCCACTCGCAAACGCTGACCTTATTCTTACAAGCTGG
TGGTCTATGGACAACTATTAAGATCATTATCATCAAATCATTCAGCCGTAAACCTGAACTTCACTGGTCTGCTCT
TGTATGGTTTCTTGCAGCAACCGTCGCGGATGTTCTCATCACTGTAACACTTGTGATAAACTTGGTCAGTACTCC
CCACGCCAAGATCCTATCTATTCCCCTCAAATTTCCCACTCCCGCAAGCCACCGTACTGACTATGATTCGCAGTC
AAAACGTAAAACAGGATTCTCCGCGACAGACGACGCTATTTCGAAAATTATTCGAAGTGGGTTTTTGACCACGTT
GACTCGCAACTGTCACTTATCATTTATCTAAGTGACGGTCCAAACTGGCATGCTAACGTAGGTTCTTTGGCAATT
CAACACTGAAACCCCAGGGTAATGTTCCTGAATCAGTGCCCTCTTCGCAATTGGAGATGTTGTCTTCTTCATGAG
TGAGGTTTATTCTTTTGTGTGGAAATACGGAGCGCTAATTGGCCCCATCTAGCTCTTGGGGTACGTAAATCTATG
GCGGTTGTAGTAACCGCGTGTTCTGAAGTTCATCTCGTTGTTGAACCATAGAAAACCGCTTTGTGCGTCAACGTG
TTTTACGTCTCTGCGCATTGTGGACTAACTCCCGATGCAGGAATTTCATTTGGGACCTAGCTCTGACTAAGATTT
ACGCGAATTGCCTAATGTCTACTTTGAATGCCCGCGCTTCTCTGAAGGAAATGACAAGCGGTCATTCAAATCAGC
GCCATTTCTCAAGTACACCTAGAAGCAGTAGACGGCTTGTAAGCTCCCATATAGTTTTTCACGCTGTCGTCCGCT
TCAACAGTTTTTTTTAGAACACAACCACAGATCCCATGTCACCAGTAAGTTCATTCAGGTGGAAGGCCATTTTTA
CTGAAGTTACCCTTTAGCTCCGCGTTCAATCACATATGTTTGAGCTTGGCAATGTATCATACGAAAAATCATCGC
GTTCGCAGTATGATGACCCTGAGTACGGCATAACTGTGACAAGGGTACGTTTTGGGTTTATTTCCTCCCGTCAGT
CCTTGAAAACCAATATATCAAATAGGTCGTGGAGACAATCCCAGATCAAGAGTCGAGGAAACCACAGGCTGTCGC
TCTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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