Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|083920
Gene name
Locationscaffold_05:1431384..1432674
Strand-
Gene length (bp)1290
Transcript length (bp)1020
Coding sequence length (bp)1020
Protein length (aa) 340

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 5.0E-09 10 95
PF05368 NmrA NmrA-like family 3.4E-07 9 87

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7K4|YGI2_SCHPO Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1 5 321 2.0E-15
sp|Q12177|YL056_YEAST Uncharacterized protein YLL056C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL056C PE=2 SV=1 5 319 2.0E-07

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup152
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|071030
Agaricus bisporus var bisporus H39 AgabiH39|071040
Agaricus bisporus var bisporus H39 AgabiH39|083920 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|071030
Agaricus bisporus var bisporus H97 AgabiH97|071040
Agaricus bisporus var bisporus H97 AgabiH97|083920
Rhodonia placenta FPRL280 RhoplFPRL280|233_5
Rhodonia placenta FPRL280 RhoplFPRL280|287_8
Rhodonia placenta FPRL280 RhoplFPRL280|335_4
Rhodonia placenta FPRL280 RhoplFPRL280|335_6
Rhodonia placenta FPRL280 RhoplFPRL280|335_7
Rhodonia placenta FPRL280 RhoplFPRL280|509_3
Rhodonia placenta FPRL280 RhoplFPRL280|594_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|083920
MAKTKVFTTGSTGYIGGSILERLLVHPNAHSFEITTLVRSQNKADKLKKLGVTPVVGSFSDTSLLEDLAAGADAV
FDAADADDLEAAKAILRGLRRRHRATGIPSIFIHTSGTGLLSDNAAGLYATDKIWDDADADDLETLPDSAPHRDV
DLAIINADNEGYVRTYLVAPSTIYGLATGRLVKAEIANNHSQQVPRLIRTALDRRRAGMVGKGVNIWPNVHIDDI
GDLYIALFDAAIADPRTRHGREGYYFGENGEHTLYEVGKHIGRVLVELGKSDIAEPTTFTPKEIDKYFAGSTSLG
SNSRCRGNRSRMIGWQPKKTTKDLFASIRPEVDDILRRG*
Coding >AgabiH39|083920
ATGGCCAAAACAAAGGTTTTCACGACCGGATCCACCGGCTACATCGGAGGATCTATCCTTGAGCGCCTTCTAGTA
CATCCTAATGCACATTCTTTCGAGATCACAACTCTCGTCCGATCGCAAAACAAAGCGGACAAGTTGAAGAAACTG
GGCGTGACGCCTGTCGTCGGCTCATTTAGTGATACTTCGCTACTAGAAGACCTCGCAGCTGGGGCAGATGCAGTG
TTCGATGCGGCGGATGCGGATGACTTGGAAGCCGCAAAGGCGATATTGCGGGGACTCAGGAGACGTCACCGAGCT
ACCGGGATTCCTTCTATCTTCATTCATACTTCAGGAACAGGTCTTTTATCGGACAATGCTGCAGGTCTCTACGCA
ACCGACAAAATATGGGATGACGCAGATGCAGATGACCTCGAAACACTGCCTGACAGCGCGCCTCATCGCGATGTC
GATCTGGCTATAATCAATGCTGACAATGAAGGCTACGTTAGAACATATCTCGTAGCCCCATCAACGATTTACGGC
CTGGCGACGGGAAGACTGGTCAAGGCCGAGATAGCCAACAATCACTCACAGCAAGTCCCAAGGTTGATTCGCACG
GCACTCGACAGGCGAAGGGCAGGTATGGTCGGAAAAGGCGTCAACATATGGCCAAACGTGCATATCGATGATATC
GGTGACCTTTACATTGCCCTGTTCGATGCTGCCATCGCAGATCCACGCACACGTCATGGTCGTGAGGGTTATTAT
TTTGGCGAGAATGGAGAACATACGTTGTACGAGGTTGGGAAGCACATTGGGCGTGTTCTTGTCGAACTCGGCAAA
AGTGACATTGCAGAGCCAACGACATTCACTCCAAAAGAAATCGACAAGTACTTTGCGGGATCAACATCATTAGGT
TCCAACTCGAGGTGCAGGGGAAACAGGTCAAGGATGATAGGTTGGCAACCCAAGAAAACCACGAAAGATCTCTTT
GCGAGTATCAGGCCGGAAGTCGATGATATTTTGAGACGAGGATAG
Transcript >AgabiH39|083920
ATGGCCAAAACAAAGGTTTTCACGACCGGATCCACCGGCTACATCGGAGGATCTATCCTTGAGCGCCTTCTAGTA
CATCCTAATGCACATTCTTTCGAGATCACAACTCTCGTCCGATCGCAAAACAAAGCGGACAAGTTGAAGAAACTG
GGCGTGACGCCTGTCGTCGGCTCATTTAGTGATACTTCGCTACTAGAAGACCTCGCAGCTGGGGCAGATGCAGTG
TTCGATGCGGCGGATGCGGATGACTTGGAAGCCGCAAAGGCGATATTGCGGGGACTCAGGAGACGTCACCGAGCT
ACCGGGATTCCTTCTATCTTCATTCATACTTCAGGAACAGGTCTTTTATCGGACAATGCTGCAGGTCTCTACGCA
ACCGACAAAATATGGGATGACGCAGATGCAGATGACCTCGAAACACTGCCTGACAGCGCGCCTCATCGCGATGTC
GATCTGGCTATAATCAATGCTGACAATGAAGGCTACGTTAGAACATATCTCGTAGCCCCATCAACGATTTACGGC
CTGGCGACGGGAAGACTGGTCAAGGCCGAGATAGCCAACAATCACTCACAGCAAGTCCCAAGGTTGATTCGCACG
GCACTCGACAGGCGAAGGGCAGGTATGGTCGGAAAAGGCGTCAACATATGGCCAAACGTGCATATCGATGATATC
GGTGACCTTTACATTGCCCTGTTCGATGCTGCCATCGCAGATCCACGCACACGTCATGGTCGTGAGGGTTATTAT
TTTGGCGAGAATGGAGAACATACGTTGTACGAGGTTGGGAAGCACATTGGGCGTGTTCTTGTCGAACTCGGCAAA
AGTGACATTGCAGAGCCAACGACATTCACTCCAAAAGAAATCGACAAGTACTTTGCGGGATCAACATCATTAGGT
TCCAACTCGAGGTGCAGGGGAAACAGGTCAAGGATGATAGGTTGGCAACCCAAGAAAACCACGAAAGATCTCTTT
GCGAGTATCAGGCCGGAAGTCGATGATATTTTGAGACGAGGATAG
Gene >AgabiH39|083920
ATGGCCAAAACAAAGGTTTTCACGACCGGATCCACCGGTTAGATCTGTTTGATTCATTCTACGTTCAATGGGGTC
AATCTCATTTTGATTGATAGGCTACATCGGAGGATCTATCCTTGAGCGCCTTCTAGTACATCCTAATGCACATTC
TTTCGAGATCACAACTCTCGTCCGATCGCAAAACAAAGCGGACAAGTTGAAGAAACTGGGCGTGACGCCTGTCGT
CGGCTCATTTAGTGATACTTCGCTACTAGAAGACCTCGCAGCTGGGGCAGATGCAGTGTTCGATGCGGTAGGTTG
GTTGGATCTTTGCAAAGATTGATGGCCCTCATAGACGCATATGAAGGCGGATGCGGATGACTTGGAAGCCGCAAA
GGCGATATTGCGGGGACTCAGGAGACGTCACCGAGCTACCGGGATTCCTTCTATCTTCATTCATACTGTATGTAT
GCCGCCCGCTTTTCAAGTTCATCGATGCACCAGTGTCGAATTTTTTTAGTCAGGAACAGGTCTTTTATCGGACAA
TGCTGCAGGTCTCTACGCAACCGACAAAATATGGGATGACGCAGATGCAGATGACCTCGAAACACTGCCTGACAG
CGCGCCTCATCGCGATGTCGATCTGGCTATAATCAATGCTGACAATGAAGGCTACGTTAGAACATATCTCGTAGC
CCCATCAACGATTTACGGCCTGGCGACGGGAAGACTGGTCAAGGCCGAGATAGCCAACAATCACTCACAGCAAGT
CCCAAGGTTGATTCGCACGGCACTCGACAGGCGAAGGGCAGGTATGGTCGGAAAAGGCGTCAACATATGGCCAAA
CGTGCATATCGATGATAGTGAGTTGTTCCTTGACAAATGTGCTCAGCAGCTTCAGTGACCTGTTTAGTCGGTGAC
CTTTACATTGCCCTGTTCGATGCTGCCATCGCAGATCCACGCACACGTCATGGTCGTGAGGGTTATTATTTTGGC
GAGAATGGAGAACATACGTTGTACGAGGTTGGGAAGCACATTGGGCGTGTTCTTGTCGAACTCGGCAAAAGTGAC
ATTGCAGAGCCAACGACATTCACTCCAAAAGAAATCGACAAGTACTTTGCGGTGCGTTGTATCTGCCTTACTGTT
TTATGATTCGACAATATCACTCCCCAGGGATCAACATCATTAGGTTCCAACTCGAGGTGCAGGGGAAACAGGTCA
AGGATGATAGGTTGGCAACCCAAGAAAACCACGAAAGATCTCTTTGCGAGTATCAGGCCGGAAGTCGATGATATT
TTGAGACGAGGATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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