© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH39|081410 |
| Gene name | |
| Location | scaffold_05:801814..803227 |
| Strand | + |
| Gene length (bp) | 1413 |
| Transcript length (bp) | 1092 |
| Coding sequence length (bp) | 1092 |
| Protein length (aa) | 364 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 61 | 83 | 22 |
| 2 | 103 | 125 | 22 |
| 3 | 135 | 157 | 22 |
| 4 | 166 | 188 | 22 |
| 5 | 212 | 234 | 22 |
| 6 | 255 | 272 | 17 |
| 7 | 287 | 309 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH39|081410 MTDSPTVVLRAALTHHASASIPGPVSSHPTSCGAAPSPNMSTAVIPLPPGLTLDQFQDLQSHLIRIAITASVAFG VIIWDYFVQLPSEIALYKSHDKNVWKTPVTWWFIILRYSGIIASLPSLFFTAAQTRSCQVAISASAVGAVLTVAS SGAIFWYRIRALWSSSLIVSVIAGFFYLLMLGCWISVATQYRGDTGPDVPFLSNCQLHPVAPWAPISFASSVAYD TCVLLLTLARFRGNNGPSKSKIGRQVYNDNLLYFALITATNIVVLCIQAQRDPKFDLIKPAAVPFATIMTVAMGT RVFLNLRLYHQRQQNHSANASLPLHSSSLASDPARRPMMFNSGSGKSSDDPCNQSSKVSTIAL* |
| Coding | >AgabiH39|081410 ATGACGGATAGTCCAACGGTAGTGCTGCGCGCAGCTCTAACTCACCACGCATCTGCATCAATCCCGGGCCCTGTT TCGTCTCATCCTACGTCCTGCGGAGCTGCGCCATCCCCCAACATGAGCACGGCAGTGATTCCTCTACCTCCTGGT CTAACATTGGACCAATTTCAGGACCTTCAATCCCACTTGATTAGGATCGCCATAACAGCCTCGGTCGCTTTCGGC GTTATTATATGGGACTATTTCGTGCAGTTGCCCAGCGAGATTGCCCTATATAAATCTCACGACAAAAATGTGTGG AAGACTCCCGTAACATGGTGGTTTATCATCCTTCGTTACTCTGGGATCATTGCATCACTGCCGTCCCTCTTCTTC ACCGCTGCACAGACACGCTCTTGTCAGGTCGCCATATCTGCTAGTGCCGTGGGTGCGGTGCTCACTGTCGCATCA TCTGGAGCTATATTTTGGTATCGTATCCGAGCGTTATGGAGTAGCTCCTTGATCGTTAGCGTCATCGCTGGTTTC TTTTACCTCCTTATGCTTGGCTGTTGGATTTCCGTTGCAACCCAATACAGAGGCGACACTGGGCCCGATGTTCCT TTTCTGTCCAACTGCCAGCTCCACCCCGTTGCCCCATGGGCGCCCATAAGCTTTGCTTCATCCGTAGCTTATGAT ACTTGCGTCCTCTTGCTCACTCTTGCCCGATTTCGCGGCAACAATGGTCCGAGCAAGTCAAAAATCGGGAGGCAG GTCTACAACGACAATTTGTTGTATTTCGCCCTCATAACTGCCACCAACATCGTTGTGCTTTGTATCCAAGCACAA AGAGATCCAAAATTTGATCTTATTAAACCCGCGGCGGTGCCTTTCGCCACTATCATGACTGTCGCAATGGGTACC CGGGTTTTCCTCAATCTTAGATTATACCATCAACGTCAACAGAACCATTCTGCGAACGCATCACTCCCTCTTCAC TCCAGCAGTCTCGCATCTGATCCCGCACGTCGGCCTATGATGTTCAACAGTGGCAGTGGGAAATCGTCGGATGAT CCTTGCAATCAAAGTAGCAAGGTTTCGACGATTGCGTTGTGA |
| Transcript | >AgabiH39|081410 ATGACGGATAGTCCAACGGTAGTGCTGCGCGCAGCTCTAACTCACCACGCATCTGCATCAATCCCGGGCCCTGTT TCGTCTCATCCTACGTCCTGCGGAGCTGCGCCATCCCCCAACATGAGCACGGCAGTGATTCCTCTACCTCCTGGT CTAACATTGGACCAATTTCAGGACCTTCAATCCCACTTGATTAGGATCGCCATAACAGCCTCGGTCGCTTTCGGC GTTATTATATGGGACTATTTCGTGCAGTTGCCCAGCGAGATTGCCCTATATAAATCTCACGACAAAAATGTGTGG AAGACTCCCGTAACATGGTGGTTTATCATCCTTCGTTACTCTGGGATCATTGCATCACTGCCGTCCCTCTTCTTC ACCGCTGCACAGACACGCTCTTGTCAGGTCGCCATATCTGCTAGTGCCGTGGGTGCGGTGCTCACTGTCGCATCA TCTGGAGCTATATTTTGGTATCGTATCCGAGCGTTATGGAGTAGCTCCTTGATCGTTAGCGTCATCGCTGGTTTC TTTTACCTCCTTATGCTTGGCTGTTGGATTTCCGTTGCAACCCAATACAGAGGCGACACTGGGCCCGATGTTCCT TTTCTGTCCAACTGCCAGCTCCACCCCGTTGCCCCATGGGCGCCCATAAGCTTTGCTTCATCCGTAGCTTATGAT ACTTGCGTCCTCTTGCTCACTCTTGCCCGATTTCGCGGCAACAATGGTCCGAGCAAGTCAAAAATCGGGAGGCAG GTCTACAACGACAATTTGTTGTATTTCGCCCTCATAACTGCCACCAACATCGTTGTGCTTTGTATCCAAGCACAA AGAGATCCAAAATTTGATCTTATTAAACCCGCGGCGGTGCCTTTCGCCACTATCATGACTGTCGCAATGGGTACC CGGGTTTTCCTCAATCTTAGATTATACCATCAACGTCAACAGAACCATTCTGCGAACGCATCACTCCCTCTTCAC TCCAGCAGTCTCGCATCTGATCCCGCACGTCGGCCTATGATGTTCAACAGTGGCAGTGGGAAATCGTCGGATGAT CCTTGCAATCAAAGTAGCAAGGTTTCGACGATTGCGTTGTGA |
| Gene | >AgabiH39|081410 ATGACGGATAGTCCAACGGTAGTGCTGCGCGCAGCTCTAGTACGTTTATTCTCTTGATTCATTACATCGTTCGAC TGATGTGCCCAAAACAGACTCACCACGCATCTGCATCAATCCCGGGCCCTGTTTCGTCTCATCCTGTGATCATAT ATAACCGATAAGCTCATCTACCATGCCTTATCCTTCAGACGTCCTGCGGAGCTGCGCCATCCCCCAACATGAGCA CGGCAGTGATTCCTCTACCTCCTGGTCTAACATTGGACCAATTTCAGGACCTTCAATCCCACTTGAGTAAGCTAG ATCTTTCTTTTCAACGGATTGGGCGGCTTAGAAGTCATTTCATAGTTAGGATCGCCATAACAGCCTCGGTCGCTT TCGGCGTTATTATATGGGACTAGTAAGTAGTCTGTTCTCATGATGTGGGAGATTTATTCAAGCCTTCTGCGGCCA CTAGTTTCGTGCAGTTGCCCAGCGAGATTGCCCTATATAAATCTCACGACAAAAATGTGTGGAAGACTCCCGTAA CATGGTGGTGAGTATGTTCTACTATACTCAAAGACAGTTTTCTCATAAATAATTTCTGACGCAGGTTTATCATCC TTCGTTACTCTGGGATCATTGCATCACTGCCGTCCCTCTTCTTCACCGCTGCACAGACACGCTCTTGTCAGGTCG CCATATCTGCTAGTGCCGTGGGTGCGGTGCTCACTGTCGCATCATCTGGAGCTATATTTTGGTATCGTATCCGAG CGTTATGGAGTAGCTCCTTGATCGTTAGCGTCATCGCTGGTTTCTTTTACCTCCTTATGCTTGGCTGTTGGGTAC GCAGTAATGATTTTCCAGATATTGGCCAGTCAATTAATGTCTTCTCAGATTTCCGTTGCAACCCAATACAGAGGC GACACTGGGCCCGATGTTCCTTTTCTGTCCAACTGCCAGCTCCACCCCGTTGCCCCATGGGCGCCCATAAGCTTT GCTTCATCCGTAGCTTATGATACTTGCGTCCTCTTGCTCACTCTTGCCCGATTTCGCGGCAACAATGGTCCGAGC AAGTCAAAAATCGGGAGGCAGGTCTACAACGACAATTTGTTGTATTTCGCCCTCATAACTGCCACCAACATCGTT GTGCTTTGTATCCAAGCACAAAGAGATCCAAAATTTGATCTTATTAAACCCGCGGCGGTGCCTTTCGCCACTATC ATGACTGTCGCAATGGGTACCCGGGTTTTCCTCAATCTTAGATTATACCATCAACGTCAACAGAACCATTCTGCG AACGCATCACTCCCTCTTCACTCCAGCAGTCTCGCATCTGATCCCGCACGTCGGCCTATGATGTTCAACAGTGGC AGTGGGAAATCGTCGGATGATCCTTGCAATCAAAGTAGCAAGGTTTCGACGATTGCGTTGTGA |