Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|078330
Gene name
Locationscaffold_05:48409..49477
Strand+
Gene length (bp)1068
Transcript length (bp)1068
Coding sequence length (bp)1068
Protein length (aa) 356

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup10522
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|078330 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|078330

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|078330
MPDHVELIRTWLDRAGTCSLDLCLRDWLDSSNRGCSEGTEAILKMFVEKSRSWRSIDLVIELRESSILDELEWDS
CPNLETAALSARYWNQGTLDTLWAKVHRSPSLRQVNWYRCFQNGLPSHTPWGQLRHIRTLNELSDADVIFLLRAC
PNLRSLDTRYTASLSGQLNSSSIISHSDLESLFLNVVSHSTPLFDHISLPSLRTLRLTNECSSDPLDIDETIGRP
VEGCLQRSACSLRVLEVFHFDRGNDLTQFLQSILYVPATRDLSRFDLYPLRSDACEHDMLAKHPSQCVRECASAM
ENDRCVPDVNPFLLLDKDSVDEDSIKIEWDLLSPLPENDHTTFTHHHLAQLHFDD*
Coding >AgabiH39|078330
ATGCCTGACCATGTGGAGCTTATACGAACGTGGTTGGACCGGGCTGGGACATGTTCTTTGGACTTATGTCTGCGG
GACTGGTTGGATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATGTTCGTCGAAAAGTCG
AGATCGTGGAGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCA
TGTCCTAATCTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGGAACTTTAGACACGCTTTGGGCGAAA
GTTCACCGTAGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCC
TGGGGGCAACTGCGGCACATCCGGACCCTCAACGAACTCTCAGATGCAGACGTCATTTTCCTTCTTCGAGCTTGT
CCTAATCTTCGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACAATTGAACTCGTCTTCTATAATATCT
CATAGCGACCTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCC
TCCCTACGGACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCT
GTGGAGGGTTGTCTCCAGCGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTTCATTTCGATCGTGGAAATGAT
CTCACGCAGTTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTATATCCTCTA
CGAAGCGACGCATGCGAACACGACATGTTGGCCAAGCATCCTTCCCAATGTGTTCGTGAATGTGCCTCAGCCATG
GAGAATGACCGATGCGTTCCCGACGTTAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATC
AAAATTGAATGGGATCTCTTATCACCCTTGCCTGAAAATGATCATACGACATTCACACATCACCATCTAGCCCAG
CTTCACTTCGATGATTAA
Transcript >AgabiH39|078330
ATGCCTGACCATGTGGAGCTTATACGAACGTGGTTGGACCGGGCTGGGACATGTTCTTTGGACTTATGTCTGCGG
GACTGGTTGGATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATGTTCGTCGAAAAGTCG
AGATCGTGGAGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCA
TGTCCTAATCTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGGAACTTTAGACACGCTTTGGGCGAAA
GTTCACCGTAGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCC
TGGGGGCAACTGCGGCACATCCGGACCCTCAACGAACTCTCAGATGCAGACGTCATTTTCCTTCTTCGAGCTTGT
CCTAATCTTCGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACAATTGAACTCGTCTTCTATAATATCT
CATAGCGACCTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCC
TCCCTACGGACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCT
GTGGAGGGTTGTCTCCAGCGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTTCATTTCGATCGTGGAAATGAT
CTCACGCAGTTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTATATCCTCTA
CGAAGCGACGCATGCGAACACGACATGTTGGCCAAGCATCCTTCCCAATGTGTTCGTGAATGTGCCTCAGCCATG
GAGAATGACCGATGCGTTCCCGACGTTAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATC
AAAATTGAATGGGATCTCTTATCACCCTTGCCTGAAAATGATCATACGACATTCACACATCACCATCTAGCCCAG
CTTCACTTCGATGATTAA
Gene >AgabiH39|078330
ATGCCTGACCATGTGGAGCTTATACGAACGTGGTTGGACCGGGCTGGGACATGTTCTTTGGACTTATGTCTGCGG
GACTGGTTGGATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATGTTCGTCGAAAAGTCG
AGATCGTGGAGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCA
TGTCCTAATCTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGGAACTTTAGACACGCTTTGGGCGAAA
GTTCACCGTAGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCC
TGGGGGCAACTGCGGCACATCCGGACCCTCAACGAACTCTCAGATGCAGACGTCATTTTCCTTCTTCGAGCTTGT
CCTAATCTTCGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACAATTGAACTCGTCTTCTATAATATCT
CATAGCGACCTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCC
TCCCTACGGACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCT
GTGGAGGGTTGTCTCCAGCGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTTCATTTCGATCGTGGAAATGAT
CTCACGCAGTTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTATATCCTCTA
CGAAGCGACGCATGCGAACACGACATGTTGGCCAAGCATCCTTCCCAATGTGTTCGTGAATGTGCCTCAGCCATG
GAGAATGACCGATGCGTTCCCGACGTTAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATC
AAAATTGAATGGGATCTCTTATCACCCTTGCCTGAAAATGATCATACGACATTCACACATCACCATCTAGCCCAG
CTTCACTTCGATGATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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