Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH39\|073560
Gene name
Location	scaffold_04:1741995..1742596
Strand	-
Gene length (bp)	601
Transcript length (bp)	543
Coding sequence length (bp)	543
Protein length (aa)	181

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09282	Mago-bind	Mago binding	1.8E-14	23	48

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9USW8\|YHY1_SCHPO	Uncharacterized protein C19C7.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC19C7.01 PE=4 SV=2	25	56	2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH39\|073560 MSRPPLNPEKTAAGIIVDPQTLQRVIPQTRRADGSVRKELKVRPGFTPQEDVKRFRGTKQAQMDASALPKGHIVG WVAPSTSNAKPKQNSAKKNAKRKEKRDEKKNNTAGEEPVRDNWEDEDEDDSASKAPDAGTDVTPVPTDTTKSPAL PPANKLKGTAVVSSNAIQKLAADLEKLSTK*
Coding	>AgabiH39\|073560 ATGTCCCGTCCCCCCCTCAACCCGGAAAAAACTGCTGCTGGTATCATCGTTGATCCGCAGACGCTCCAGCGTGTA ATCCCTCAAACGAGGCGTGCTGATGGATCTGTACGAAAGGAGCTCAAAGTCAGACCGGGGTTTACCCCTCAGGAG GATGTCAAACGCTTCAGAGGCACCAAGCAAGCTCAGATGGACGCCAGTGCTCTGCCTAAGGGTCACATCGTCGGT TGGGTCGCACCTTCTACGTCCAATGCGAAACCAAAGCAGAATTCTGCCAAGAAGAATGCAAAGCGCAAGGAGAAA AGGGACGAAAAGAAAAACAACACCGCGGGTGAAGAACCGGTGCGGGATAATTGGGAAGACGAAGACGAGGATGAT TCTGCTTCTAAAGCACCCGACGCTGGCACTGACGTGACGCCTGTTCCCACTGACACCACGAAATCGCCCGCTTTG CCACCTGCCAACAAATTAAAGGGAACAGCTGTTGTCAGCTCGAACGCCATACAGAAGCTTGCAGCAGATCTGGAG AAACTCAGCACGAAATAA
Transcript	>AgabiH39\|073560 ATGTCCCGTCCCCCCCTCAACCCGGAAAAAACTGCTGCTGGTATCATCGTTGATCCGCAGACGCTCCAGCGTGTA ATCCCTCAAACGAGGCGTGCTGATGGATCTGTACGAAAGGAGCTCAAAGTCAGACCGGGGTTTACCCCTCAGGAG GATGTCAAACGCTTCAGAGGCACCAAGCAAGCTCAGATGGACGCCAGTGCTCTGCCTAAGGGTCACATCGTCGGT TGGGTCGCACCTTCTACGTCCAATGCGAAACCAAAGCAGAATTCTGCCAAGAAGAATGCAAAGCGCAAGGAGAAA AGGGACGAAAAGAAAAACAACACCGCGGGTGAAGAACCGGTGCGGGATAATTGGGAAGACGAAGACGAGGATGAT TCTGCTTCTAAAGCACCCGACGCTGGCACTGACGTGACGCCTGTTCCCACTGACACCACGAAATCGCCCGCTTTG CCACCTGCCAACAAATTAAAGGGAACAGCTGTTGTCAGCTCGAACGCCATACAGAAGCTTGCAGCAGATCTGGAG AAACTCAGCACGAAATAA
Gene	>AgabiH39\|073560 ATGTCCCGTCCCCCCCTCAACCCGGAAAAAACTGCTGCTGGTATCATCGTTGATCCGCAGACGCTCCAGCGTGTA ATCCCTCAAACGAGGCGTGCTGATGGATCGTAAGCAGTTGTTTCTTATCGGACACTTCACCATCGATTCATGTCT GTTTCTGTTCAGTGTACGAAAGGAGCTCAAAGTCAGACCGGGGTTTACCCCTCAGGAGGATGTCAAACGCTTCAG AGGCACCAAGCAAGCTCAGATGGACGCCAGTGCTCTGCCTAAGGGTCACATCGTCGGTTGGGTCGCACCTTCTAC GTCCAATGCGAAACCAAAGCAGAATTCTGCCAAGAAGAATGCAAAGCGCAAGGAGAAAAGGGACGAAAAGAAAAA CAACACCGCGGGTGAAGAACCGGTGCGGGATAATTGGGAAGACGAAGACGAGGATGATTCTGCTTCTAAAGCACC CGACGCTGGCACTGACGTGACGCCTGTTCCCACTGACACCACGAAATCGCCCGCTTTGCCACCTGCCAACAAATT AAAGGGAACAGCTGTTGTCAGCTCGAACGCCATACAGAAGCTTGCAGCAGATCTGGAGAAACTCAGCACGAAATA A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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