Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|071030
Gene name
Locationscaffold_04:1153062..1154359
Strand-
Gene length (bp)1297
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 6.6E-09 11 93
PF05368 NmrA NmrA-like family 8.4E-07 9 77

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7K4|YGI2_SCHPO Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1 5 323 5.0E-14

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup152
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|071030 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|071040
Agaricus bisporus var bisporus H39 AgabiH39|083920
Agaricus bisporus var bisporus H97 AgabiH97|071030
Agaricus bisporus var bisporus H97 AgabiH97|071040
Agaricus bisporus var bisporus H97 AgabiH97|083920
Rhodonia placenta FPRL280 RhoplFPRL280|233_5
Rhodonia placenta FPRL280 RhoplFPRL280|287_8
Rhodonia placenta FPRL280 RhoplFPRL280|335_4
Rhodonia placenta FPRL280 RhoplFPRL280|335_6
Rhodonia placenta FPRL280 RhoplFPRL280|335_7
Rhodonia placenta FPRL280 RhoplFPRL280|509_3
Rhodonia placenta FPRL280 RhoplFPRL280|594_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|071030
MSPTLKFFFVGATGYIGSSVLERFLDHPDASNFEFTALVRDPRKAETFKQFGINATVGSFDDAQLVEDLTAAADV
VVDAGNADDLGLTKSMLRGFKRGFQKTGKPSTFIHTSGTGVLVDDAAGLRTTDVIWNDADPDQIEQLPPTAPHRD
VDLEILQADKEGYVRAYFVLPSTIYGMASGKLVDAGLANKHSVQVPALIKTSLDRGQAGMIGKGLNIWPNVHIDE
AADFYIELFNAIKANPDAVGHGRDGFYILLNGEHTLYDVSKEIGRALVALGKATTEVPSTYTQEEVNKYFGGLNY
LGTNSRGLANHSRSIGWKPKKTTQDFLASIGPEVEEIAKSKHL*
Coding >AgabiH39|071030
ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCTGTTCTGGAACGTTTCCTC
GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAACATTCAAGCAA
TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGACTTGACTGCCGCTGCAGACGTT
GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA
AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAGTTGATGATGCTGCGGGCCTTCGT
ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACCGCACCCCATCGTGAC
GTAGACCTTGAGATACTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT
GGAATGGCCTCTGGAAAGCTCGTGGATGCAGGTCTCGCTAATAAGCATTCTGTTCAGGTACCTGCCCTCATCAAG
ACCTCACTTGATAGAGGACAGGCTGGGATGATCGGTAAAGGATTGAACATCTGGCCAAACGTCCATATTGATGAA
GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAATCCCGACGCCGTTGGTCATGGCCGCGACGGT
TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT
GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTTGGAGGTTTAAATTAC
TTGGGCACAAACTCGAGGGGATTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC
TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA
Transcript >AgabiH39|071030
ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCTGTTCTGGAACGTTTCCTC
GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAACATTCAAGCAA
TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGACTTGACTGCCGCTGCAGACGTT
GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA
AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAGTTGATGATGCTGCGGGCCTTCGT
ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACCGCACCCCATCGTGAC
GTAGACCTTGAGATACTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT
GGAATGGCCTCTGGAAAGCTCGTGGATGCAGGTCTCGCTAATAAGCATTCTGTTCAGGTACCTGCCCTCATCAAG
ACCTCACTTGATAGAGGACAGGCTGGGATGATCGGTAAAGGATTGAACATCTGGCCAAACGTCCATATTGATGAA
GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAATCCCGACGCCGTTGGTCATGGCCGCGACGGT
TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT
GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTTGGAGGTTTAAATTAC
TTGGGCACAAACTCGAGGGGATTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC
TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA
Gene >AgabiH39|071030
ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGTCAGCTAAAATCCACATTTCTTTGCATGAGCTCA
TCTCAGACTATCATCTTCAGGCTATATCGGCAGCTCTGTTCTGGAACGTTTCCTCGATCATCCGGACGCCAGTAA
CTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAACATTCAAGCAATTCGGCATAAATGCTACTGT
CGGTTCTTTTGATGATGCTCAGCTCGTCGAGGACTTGACTGCCGCTGCAGACGTTGTCGTAGACGCAGTAAGTCA
GAAAATTTTGGATTAGATTCATTAAACATACATGCTTCAGGGAAATGCAGATGATCTTGGACTCACCAAAAGTAT
GCTTCGCGGCTTCAAAAGAGGGTTCCAAAAAACTGGGAAACCTTCGACCTTTATTCACACCGTGAGTCTTCGTGC
ATATACTTGGGGCTAGCTACTTCAACTCAACTTTCTAGTCCGGAACCGGCGTCTTAGTTGATGATGCTGCGGGCC
TTCGTACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACCGCACCCCATC
GTGACGTAGACCTTGAGATACTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAA
TATATGGAATGGCCTCTGGAAAGCTCGTGGATGCAGGTCTCGCTAATAAGCATTCTGTTCAGGTACCTGCCCTCA
TCAAGACCTCACTTGATAGAGGACAGGCTGGGATGATCGGTAAAGGATTGAACATCTGGCCAAACGTCCATATTG
ATGAAGGTCAGCTCACTGACTCGCTTTGTCCGAGTCCGTTCATTTATTTGGAAATTAGCCGCCGATTTCTATATC
GAGCTCTTTAACGCAATCAAAGCCAATCCCGACGCCGTTGGTCATGGCCGCGACGGTTTTTATATTCTGTTGAAT
GGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTTGGAAAGGCGACCACCGAA
GTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTTGGAGTGAGTTTTGATCATTCTTGGGCTCGTTGA
GGGCAGGTCGAACCTGACGTCTCCATAGGGTTTAAATTACTTGGGCACAAACTCGAGGGGATTGGCCAATCATTC
TAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGACTTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGAT
TGCCAAATCAAAGCATTTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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