Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|046080
Gene name
Locationscaffold_02:1787744..1789644
Strand+
Gene length (bp)1900
Transcript length (bp)1455
Coding sequence length (bp)1455
Protein length (aa) 485

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00288 GHMP_kinases_N GHMP kinases N terminal domain 4.9E-14 141 221
PF08544 GHMP_kinases_C GHMP kinases C terminal 4.8E-09 372 445

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9UT88|ERG8_SCHPO Probable phosphomevalonate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg8 PE=3 SV=1 3 459 2.0E-62
sp|P24521|ERG8_YEAST Phosphomevalonate kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG8 PE=1 SV=2 8 444 2.0E-51

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0097367 carbohydrate derivative binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0036094 small molecule binding No
GO:0000166 nucleotide binding No
GO:0017076 purine nucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:0005488 binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0032555 purine ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No
GO:0030554 adenyl nucleotide binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup2470
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|046080 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|046080
Rhodonia placenta FPRL280 RhoplFPRL280|10_81

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|046080
MPLSTVVSSPGKVLLTGGYLVLDPAYSGTVISASSRFYTIVQDDTTVGSGNIRVRSPQFNDATWNFVVDIDSESI
LDPESNNATKNKFVQLALEKTIRLAVELKEKTIIQERATLASLSISRTLESLKMIKPFNKSGITLSDVHKTGLGS
SAALITSLVSALLVHFSVLPKSAFSEDAENNHDAKMDVLGKALAHNLAQYVHCLAQGKVGSGFDVSAAVFGTHLY
TRFDPAVLQLLMDDSTHQTLEPVISPSNPSWNHSIKPFKLPPLTRLMLADVDAGSDTPSLVGKVLKWRKENSVES
DTLWREIDQLNQSFAQTLLHISTLHDQDTVNYGTALKYISSLQPVQWAANPWQPEEEIPIVEAFYEAHRISQDIR
EKMRKMGALAGVPIEPPEQTKLLNACVSQAGVIGGGVPGAGGYDAIWLLVCDPIDCSPDQRPTERVEHVWSNYKD
LDVSPLSTSESTISGSRLEQLEEVPGLKEAVSIE*
Coding >AgabiH39|046080
ATGCCTCTTTCAACCGTTGTCTCTTCCCCAGGCAAGGTCCTCCTCACAGGAGGTTACCTCGTGCTTGACCCAGCC
TACTCTGGCACTGTCATTTCTGCCTCTTCTCGCTTTTATACTATAGTGCAAGATGATACCACAGTCGGCTCAGGT
AACATCCGCGTTCGTTCACCTCAATTCAATGATGCAACCTGGAATTTTGTGGTCGACATCGACTCCGAGAGTATT
CTCGACCCTGAATCCAACAACGCCACAAAAAACAAATTCGTACAACTTGCATTGGAGAAGACGATCAGGTTAGCT
GTTGAGCTGAAGGAAAAAACCATCATTCAAGAGCGCGCGACACTTGCGTCGCTAAGCATCTCAAGGACGCTCGAG
TCTCTGAAAATGATAAAACCCTTCAACAAGTCGGGCATCACACTATCGGATGTACATAAAACCGGCTTGGGGTCT
TCTGCAGCGCTCATCACATCACTTGTTTCCGCGCTTCTTGTTCATTTTTCTGTTCTTCCGAAATCGGCTTTTTCG
GAAGACGCAGAGAACAATCATGATGCGAAGATGGACGTATTGGGAAAAGCTCTCGCTCACAATCTTGCTCAATAT
GTGCACTGTCTGGCTCAAGGAAAAGTTGGAAGTGGATTCGATGTCTCGGCCGCGGTGTTTGGGACGCATCTTTAC
ACGAGGTTCGACCCGGCAGTTCTTCAACTGCTTATGGATGATTCGACGCATCAAACGCTTGAGCCGGTTATATCT
CCGTCCAACCCGTCATGGAATCACAGCATCAAGCCGTTTAAGCTTCCGCCGTTGACCCGATTAATGCTGGCAGAT
GTAGACGCTGGGAGCGATACACCATCACTCGTAGGTAAGGTTCTCAAATGGAGAAAAGAGAACAGCGTTGAGTCC
GACACATTATGGAGAGAGATTGACCAATTGAACCAGTCTTTTGCGCAAACCCTGCTTCATATCTCGACGCTTCAT
GACCAAGATACAGTTAACTATGGTACAGCCTTGAAATATATCTCTTCACTCCAGCCTGTTCAATGGGCTGCAAAC
CCATGGCAACCAGAAGAAGAAATACCTATCGTTGAAGCATTCTATGAAGCCCACCGCATATCACAGGATATACGA
GAGAAAATGCGAAAGATGGGTGCCCTTGCCGGTGTTCCGATAGAGCCACCTGAGCAGACGAAGCTTCTTAATGCA
TGTGTATCTCAAGCTGGTGTAATCGGAGGTGGTGTGCCAGGAGCTGGAGGCTATGATGCAATCTGGCTACTAGTC
TGTGATCCCATCGATTGTTCTCCAGATCAACGTCCGACAGAGCGGGTTGAACACGTATGGAGTAACTACAAAGAT
TTGGACGTATCTCCTCTCTCGACCTCGGAGAGTACGATCAGCGGCAGCCGGCTGGAACAACTCGAAGAGGTACCG
GGACTGAAAGAAGCGGTCTCGATCGAGTGA
Transcript >AgabiH39|046080
ATGCCTCTTTCAACCGTTGTCTCTTCCCCAGGCAAGGTCCTCCTCACAGGAGGTTACCTCGTGCTTGACCCAGCC
TACTCTGGCACTGTCATTTCTGCCTCTTCTCGCTTTTATACTATAGTGCAAGATGATACCACAGTCGGCTCAGGT
AACATCCGCGTTCGTTCACCTCAATTCAATGATGCAACCTGGAATTTTGTGGTCGACATCGACTCCGAGAGTATT
CTCGACCCTGAATCCAACAACGCCACAAAAAACAAATTCGTACAACTTGCATTGGAGAAGACGATCAGGTTAGCT
GTTGAGCTGAAGGAAAAAACCATCATTCAAGAGCGCGCGACACTTGCGTCGCTAAGCATCTCAAGGACGCTCGAG
TCTCTGAAAATGATAAAACCCTTCAACAAGTCGGGCATCACACTATCGGATGTACATAAAACCGGCTTGGGGTCT
TCTGCAGCGCTCATCACATCACTTGTTTCCGCGCTTCTTGTTCATTTTTCTGTTCTTCCGAAATCGGCTTTTTCG
GAAGACGCAGAGAACAATCATGATGCGAAGATGGACGTATTGGGAAAAGCTCTCGCTCACAATCTTGCTCAATAT
GTGCACTGTCTGGCTCAAGGAAAAGTTGGAAGTGGATTCGATGTCTCGGCCGCGGTGTTTGGGACGCATCTTTAC
ACGAGGTTCGACCCGGCAGTTCTTCAACTGCTTATGGATGATTCGACGCATCAAACGCTTGAGCCGGTTATATCT
CCGTCCAACCCGTCATGGAATCACAGCATCAAGCCGTTTAAGCTTCCGCCGTTGACCCGATTAATGCTGGCAGAT
GTAGACGCTGGGAGCGATACACCATCACTCGTAGGTAAGGTTCTCAAATGGAGAAAAGAGAACAGCGTTGAGTCC
GACACATTATGGAGAGAGATTGACCAATTGAACCAGTCTTTTGCGCAAACCCTGCTTCATATCTCGACGCTTCAT
GACCAAGATACAGTTAACTATGGTACAGCCTTGAAATATATCTCTTCACTCCAGCCTGTTCAATGGGCTGCAAAC
CCATGGCAACCAGAAGAAGAAATACCTATCGTTGAAGCATTCTATGAAGCCCACCGCATATCACAGGATATACGA
GAGAAAATGCGAAAGATGGGTGCCCTTGCCGGTGTTCCGATAGAGCCACCTGAGCAGACGAAGCTTCTTAATGCA
TGTGTATCTCAAGCTGGTGTAATCGGAGGTGGTGTGCCAGGAGCTGGAGGCTATGATGCAATCTGGCTACTAGTC
TGTGATCCCATCGATTGTTCTCCAGATCAACGTCCGACAGAGCGGGTTGAACACGTATGGAGTAACTACAAAGAT
TTGGACGTATCTCCTCTCTCGACCTCGGAGAGTACGATCAGCGGCAGCCGGCTGGAACAACTCGAAGAGGTACCG
GGACTGAAAGAAGCGGTCTCGATCGAGTGA
Gene >AgabiH39|046080
ATGCCTCTTTCAACCGTTGTCTCTTCCCCAGGCAAGGTCCTCCTCACAGGAGGTTACCTCGTGCTTGACCCAGCC
TACTCTGGCACTGTCATTTCTGCCTCTTCTCGCTTTTATACTATAGTGCAAGATGATACCACAGTCGGCTCAGGT
AACATCCGCGTTCGTTCACCTCAATTCAATGATGCAACCTGGAATTTTGTGGTCGACATCGACTCCGAGAGTATT
CTCGACCCTGAATCCAACAAGTGCGTAACGTTATGATAGATCCGTAGGATGCATCTGGAAGGTTTCTGCAGCGCC
ACAAAAAACAAATTCGTACAACTTGCATTGGAGAAGACGATCAGGTTAGCTGTTGAGCTGAAGGAAAAAACCATC
ATTCAAGAGGTGCTCTCACATGGAATCGATATTGCTATCGTCGGGGACAATGATTTCTATTCCCAGCGCGCGACA
GTAAACAATTCATTCACCATTGTTACATTGCCATCTTTCTGATCGGGGCCTAGCTTGCGTCGCTAAGCATCTCAA
GGACGCTCGAGTCTCTGAAAATGATAAAACCCTTCAACAAGTCGGGCATCACACTATCGGATGTACATAAAACCG
GCTTGGGGTCTTCTGCAGCGCTCATCACATCACTTGTTTCCGCGCTTCTTGTTCATTTTTCTGTTCTTCCGAAAT
CGGCTTTTTCGGAAGACGCAGAGAACAATCATGATGCGAAGATGGACGTATTGGGAAAAGCTCTCGCTCACAATC
TTGCTCAATATGTGCACTGTCTGGCTCAAGGAAAAGTTGGAAGTGGATTCGATGTCTCGGCCGCGGTGTTTGGGA
CGCATCTTTACACGAGGTTCGACCCGGCAGTTCTTCAACTGCTTATGGATGATTCGACGGTGTGTTTCATCTAAT
TATGAAATGAGATGTTTTTACAATTCTCGATCCGCTTTACCAGCATCAAACGCTTGAGCCGGTTATATCTCCGTC
CAACCCGTCATGGAATCACAGCATCAAGCCGTTTAAGCTTCCGCCGTTGACCCGATTAATGCTGGCAGATGTAGA
CGCTGGGAGCGATACACCATCACTCGTAGGTAAGGTTCTCAAATGGAGAAAAGAGAACAGCGTTGAGTGTGAGGC
TTTGGTAGTCACTTTCTTTCTCGAATCTGCATTGACAGTGTTTGCTAGCCGACACATTATGGAGAGAGATTGACC
AATTGAACCAGTCTTTTGCGCAAACCCTGCTTCATATCTCGACGCTTCATGACCAAGATACAGTTAACTATGGTA
CAGCCTTGAAATATATCTCTTCACTCCAGCCTGTTCAAGTGAGTATCTTTTGAGTTCATCGTGGATTACCCCTGA
CAAGATTTTACGTGCACAGTGGGCTGCAAACCCATGGCAACCAGAAGAAGAAATACCTATCGTTGAAGCATTCTA
TGAAGCCCACCGCATATCACAGGCATGTTCATAATTTCCTCTTATCTCTTCAAGCCCCAATCCAGATTGTTGCTC
AGGATATACGAGAGAAAATGCGAAAGATGGGTGCCCTTGCCGGTGTTCCGATAGAGCCACCTGAGCAGACGAAGC
TTCTTAATGCATGTGTATCTCAAGCTGGTGTAATCGGAGGTGGTGTGCCAGGAGGTGTGCCCTTTTATTATTATC
ACTACCTTCCCAGATTCCTAAATGGTCACCATTATCAGCTGGAGGCTATGATGCAATCTGGCTACTAGTCTGTGA
TCCCATCGATTGTTCTCCAGATCAACGTCCGACAGAGCGGGTTGAACACGTATGGAGTAACTACAAAGATTTGGA
CGTATCTCCTCTCTCGACCTCGGAGAGTACGATCAGCGGCAGCCGGCTGGAACAACTCGAAGAGGTACCGGGACT
GAAAGAAGCGGTCTCGATCGAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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