Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|038890
Gene name
Locationscaffold_02:117677..119376
Strand-
Gene length (bp)1699
Transcript length (bp)1500
Coding sequence length (bp)1500
Protein length (aa) 500

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00646 F-box F-box domain 3.4E-07 33 73
PF12937 F-box-like F-box-like 7.9E-07 34 76

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup1266
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|038860
Agaricus bisporus var bisporus H39 AgabiH39|038870
Agaricus bisporus var bisporus H39 AgabiH39|038890 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|038930
Agaricus bisporus var bisporus H39 AgabiH39|039040
Agaricus bisporus var bisporus H39 AgabiH39|238500
Agaricus bisporus var bisporus H39 AgabiH39|295900
Agaricus bisporus var bisporus H97 AgabiH97|038930
Agaricus bisporus var bisporus H97 AgabiH97|038920
Agaricus bisporus var bisporus H97 AgabiH97|038910
Agaricus bisporus var bisporus H97 AgabiH97|038900
Agaricus bisporus var bisporus H97 AgabiH97|038860
Agaricus bisporus var bisporus H97 AgabiH97|038870
Agaricus bisporus var bisporus H97 AgabiH97|039040
Agaricus bisporus var bisporus H97 AgabiH97|038850
Agaricus bisporus var bisporus H97 AgabiH97|038890
Agaricus bisporus var bisporus H97 AgabiH97|063380

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|038890
MTDTKDFPQPTKFLYHSMCGTTCQTEEPSQTGFSSLPSEIIAEIFKELDWRDLLNARQTCTLLYNASKSREIWDN
LIRIHAAAAHGPPTIFDKPMRMHNAVKFEDRFLRWMKTESTWLNEIPLNEKYIPDSSHEFLYSHLLRGGRWLICS
DSGGEVLYCDLESPETGFVPLIPYPFSCRRKSMAMMAIEEDPESEILSFKIALVHILFADWMKGPHGQPEVTGDS
RVDVWSGRVILDEDGQVMGLQVEQLATVRISLYLGQPLFGVSLRVYACDAIIIDWKSQPSRRQSFRRKIVNFLSS
FAGDGRKLEVMLLPGDRVLTVPPPGLRIYDHSLVPWSSEERPLWVDMSIPKQHACTVNVPGTSIQHPCGFSELFS
LPDNEYRVVFNTIARIRGLTMRYSEAGGFQAKALELLNWSEKMDFTISEYRSHFLYTCGVARSKSDHLLRVRFSW
PDEEGSFETGMSLILDEPNETPLVVNVDVAAGRLAWIATESGRVAMMDL*
Coding >AgabiH39|038890
ATGACAGATACTAAGGATTTCCCTCAACCCACCAAGTTTTTATATCATAGCATGTGTGGCACAACCTGCCAAACA
GAGGAACCCTCACAAACTGGGTTCAGCTCGCTACCATCTGAAATCATTGCGGAAATTTTTAAAGAACTAGATTGG
AGAGATTTACTGAATGCACGCCAGACTTGCACACTCCTTTATAACGCGTCAAAATCCAGAGAGATATGGGACAAT
CTGATTAGAATCCATGCCGCCGCCGCTCATGGGCCTCCGACGATATTCGACAAACCTATGCGCATGCACAACGCT
GTCAAATTCGAAGACCGGTTTCTCCGTTGGATGAAAACCGAGTCCACTTGGCTCAATGAAATCCCTTTGAATGAA
AAGTACATCCCGGATTCTTCACACGAATTCCTGTACTCTCATCTCCTTCGAGGAGGCCGATGGCTCATCTGCTCC
GACTCCGGAGGTGAGGTGCTCTACTGCGATCTGGAATCACCTGAGACTGGCTTTGTTCCTCTGATCCCTTATCCG
TTCTCGTGCCGGCGTAAATCTATGGCTATGATGGCTATCGAAGAGGATCCCGAGAGTGAAATCCTGTCTTTCAAA
ATTGCCCTGGTCCATATTCTGTTTGCCGACTGGATGAAAGGTCCACATGGACAACCTGAGGTGACTGGGGATTCG
CGGGTTGATGTATGGTCGGGTCGCGTTATCTTAGACGAGGACGGCCAGGTAATGGGTTTGCAAGTTGAGCAACTT
GCAACCGTTCGCATATCCCTGTATCTTGGTCAACCTTTATTCGGCGTATCTCTACGTGTTTACGCATGTGATGCG
ATAATTATCGACTGGAAGTCGCAACCGAGCCGGAGGCAATCGTTCAGACGCAAAATCGTAAATTTTCTATCTAGT
TTCGCTGGTGATGGTCGGAAGCTCGAAGTGATGTTACTTCCTGGAGACCGAGTGCTTACCGTGCCTCCCCCAGGC
CTTCGCATCTATGACCATTCATTGGTTCCATGGTCCTCAGAGGAGAGGCCTCTGTGGGTTGATATGTCTATACCC
AAACAACATGCATGTACCGTCAATGTACCCGGGACTTCTATCCAACATCCTTGTGGCTTCTCAGAGTTATTTTCT
CTCCCGGATAATGAATATCGAGTGGTGTTCAACACCATAGCTAGGATAAGGGGACTCACCATGCGTTATTCGGAA
GCAGGCGGATTTCAGGCAAAAGCACTGGAACTCCTCAACTGGAGCGAGAAGATGGACTTCACTATCAGTGAATAC
CGATCACATTTCTTGTATACTTGTGGGGTTGCCCGCTCTAAATCGGACCACCTTTTACGTGTTCGTTTTTCCTGG
CCTGACGAGGAAGGCTCGTTTGAAACAGGGATGTCTCTTATCTTAGACGAGCCAAACGAGACGCCTTTGGTTGTG
AACGTGGATGTCGCAGCTGGAAGGTTGGCATGGATAGCCACTGAGAGTGGTCGAGTGGCTATGATGGATTTATAG
Transcript >AgabiH39|038890
ATGACAGATACTAAGGATTTCCCTCAACCCACCAAGTTTTTATATCATAGCATGTGTGGCACAACCTGCCAAACA
GAGGAACCCTCACAAACTGGGTTCAGCTCGCTACCATCTGAAATCATTGCGGAAATTTTTAAAGAACTAGATTGG
AGAGATTTACTGAATGCACGCCAGACTTGCACACTCCTTTATAACGCGTCAAAATCCAGAGAGATATGGGACAAT
CTGATTAGAATCCATGCCGCCGCCGCTCATGGGCCTCCGACGATATTCGACAAACCTATGCGCATGCACAACGCT
GTCAAATTCGAAGACCGGTTTCTCCGTTGGATGAAAACCGAGTCCACTTGGCTCAATGAAATCCCTTTGAATGAA
AAGTACATCCCGGATTCTTCACACGAATTCCTGTACTCTCATCTCCTTCGAGGAGGCCGATGGCTCATCTGCTCC
GACTCCGGAGGTGAGGTGCTCTACTGCGATCTGGAATCACCTGAGACTGGCTTTGTTCCTCTGATCCCTTATCCG
TTCTCGTGCCGGCGTAAATCTATGGCTATGATGGCTATCGAAGAGGATCCCGAGAGTGAAATCCTGTCTTTCAAA
ATTGCCCTGGTCCATATTCTGTTTGCCGACTGGATGAAAGGTCCACATGGACAACCTGAGGTGACTGGGGATTCG
CGGGTTGATGTATGGTCGGGTCGCGTTATCTTAGACGAGGACGGCCAGGTAATGGGTTTGCAAGTTGAGCAACTT
GCAACCGTTCGCATATCCCTGTATCTTGGTCAACCTTTATTCGGCGTATCTCTACGTGTTTACGCATGTGATGCG
ATAATTATCGACTGGAAGTCGCAACCGAGCCGGAGGCAATCGTTCAGACGCAAAATCGTAAATTTTCTATCTAGT
TTCGCTGGTGATGGTCGGAAGCTCGAAGTGATGTTACTTCCTGGAGACCGAGTGCTTACCGTGCCTCCCCCAGGC
CTTCGCATCTATGACCATTCATTGGTTCCATGGTCCTCAGAGGAGAGGCCTCTGTGGGTTGATATGTCTATACCC
AAACAACATGCATGTACCGTCAATGTACCCGGGACTTCTATCCAACATCCTTGTGGCTTCTCAGAGTTATTTTCT
CTCCCGGATAATGAATATCGAGTGGTGTTCAACACCATAGCTAGGATAAGGGGACTCACCATGCGTTATTCGGAA
GCAGGCGGATTTCAGGCAAAAGCACTGGAACTCCTCAACTGGAGCGAGAAGATGGACTTCACTATCAGTGAATAC
CGATCACATTTCTTGTATACTTGTGGGGTTGCCCGCTCTAAATCGGACCACCTTTTACGTGTTCGTTTTTCCTGG
CCTGACGAGGAAGGCTCGTTTGAAACAGGGATGTCTCTTATCTTAGACGAGCCAAACGAGACGCCTTTGGTTGTG
AACGTGGATGTCGCAGCTGGAAGGTTGGCATGGATAGCCACTGAGAGTGGTCGAGTGGCTATGATGGATTTATAG
Gene >AgabiH39|038890
ATGACAGATACTAAGGATTTCCCTCAACCCACCAAGTTTTTATATCATAGCATGTGTGGCACAACCTGCCAAACA
GAGGTGAGTCTCTATGTACAACAAGAGATTGACTTATGGTGAGGTATACTAGGAACCCTCACAAACTGGGTTCAG
CTCGCTACCATCTGAAATCATTGCGGAAATTTTTAAAGAACTAGATTGGAGAGATTTACTGAATGCACGCCAGGT
GGGTGCATCATGTATAAGCTCTCTATATCGCAATCTCATCCGTAGTCTTAGACTTGCACACTCCTTTATAACGCG
TCAAAATCCAGAGAGATATGGGACAATCTGATTAGAATCCATGCCGCCGCCGCTCATGGGCCTCCGACGATATTC
GACAAACCTATGCGCATGCACAACGCTGTCAAATTCGAAGACCGGTTTCTCCGTTGGATGAAAACCGAGTCCACT
TGGCTCAATGAAATCCCTTTGAATGAAAAGTACATCCCGGATTCTTCACACGAATTCCTGTACTCTCATCTCCTT
CGAGGAGGCCGATGGCTCATCTGCTCCGACTCCGGAGGTGAGGTGCTCTACTGCGATCTGGAATCACCTGAGACT
GGCTTTGTTCCTCTGATCCCTTATCCGTTCTCGTGCCGGCGTAAATCTATGGCTATGATGGCTATCGAAGAGGAT
CCCGAGAGTGAAATCCTGTCTTTCAAAATTGCCCTGGTCCATATTCTGTTTGCCGACTGGATGAAAGGTCCACAT
GGACAACCTGAGGTGACTGGGGATTCGCGGGTTGATGTATGGTCGGGTCGCGTTATCTTAGACGAGGACGGCCAG
GTAATGGGTTTGCAAGTTGAGCAACTTGCAACCGTTCGCATATCCCTGTATCTTGGTCAACCTTTATTCGGCGTA
TCTCTACGTGGTCCCCTTGTTGCCTTCACTGTGCAATGACGCTTGTTTGGCACGACAGTTTACGCATGTGATGCG
ATAATTATCGACTGGAAGTCGCAACCGAGCCGGAGGCAATCGTTCAGACGCAAAATCGTAAATTTTCTATCTAGT
TTCGCTGGTGATGGTCGGAAGGTGAGGTGGGCTCTGATTCCAGAATACGCTCTTGACCTACCTATTCTAGCTCGA
AGTGATGTTACTTCCTGGAGACCGAGTGCTTACCGTGCCTCCCCCAGGCCTTCGCATCTATGACCATTCATTGGT
TCCATGGTCCTCAGAGGAGAGGCCTCTGTGGGTTGATATGTCTATACCCAAACAACATGCATGTACCGTCAATGT
ACCCGGGACTTCTATCCAACATCCTTGTGGCTTCTCAGAGTTATTTTCTCTCCCGGATAATGAATATCGAGTGGT
GTTCAACACCATAGCTAGGATAAGGGGACTCACCATGCGTTATTCGGAAGCAGGCGGATTTCAGGCAAAAGCACT
GGAACTCCTCAACTGGAGCGAGAAGATGGACTTCACTATCAGTGAATACCGATCACATTTCTTGTATACTTGTGG
GGTTGCCCGCTCTAAATCGGACCACCTTTTACGTGTTCGTTTTTCCTGGCCTGACGAGGAAGGCTCGTTTGAAAC
AGGGATGTCTCTTATCTTAGACGAGCCAAACGAGACGCCTTTGGTTGTGAACGTGGATGTCGCAGCTGGAAGGTT
GGCATGGATAGCCACTGAGAGTGGTCGAGTGGCTATGATGGATTTATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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