Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|038290
Gene name
Locationscaffold_13:1331138..1332560
Strand-
Gene length (bp)1422
Transcript length (bp)1422
Coding sequence length (bp)1422
Protein length (aa) 474

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.7E-06 61 118

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup12284
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|038290 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|038290

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|038290
MEFVKANPHCDYRPQDDYPHTLTNLVQINEQVNSLNDHIRDLFKIRSTLLHRSNQLRSLASTLPPKILSNIFRKL
VDPDFALGEPSAPFRLRQSFTLSSVSTHWRHVALGTPQLWEDMHCIVANNNQSVEHLISLLQHCSSCAHTLNLLL
SLPSFENAREVLHTLTQALFSSEIKEKVRSLTLCWPPAHWLSMISRLTSLRSLYILGYNASDRDNFRLYTLATVP
TSLRSLHVEDVPMFDTPILRLCQNIEFCIYRPGSPIVPVSYSEPLILGKLERLIMPAGHGLQTITSAGNLLMPSL
KYLELEHRGFHDLDVYPDIIIHFCRQVSKTLVGLTIRCSGPQWSVDALRILFKSLPHLREFHAEGWIVAPINVIQ
ALISYKDNNREIDCLPRLTTLSLHEEPNDGGSLPSRSYFDLLLELLKSRRTNEGPLFHVDIAGRSFMALTPEMKE
ELKSVVNNHQTLVTNRKQKLPWL*
Coding >AgabiH39|038290
ATGGAGTTTGTAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCCATACGCTAACAAATCTC
GTGCAAATCAACGAGCAAGTCAACAGCCTCAACGACCATATTCGCGACTTGTTCAAGATACGCAGCACTTTGCTT
CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTAAAATCTTGTCAAACATATTTCGCAAGTTG
GTCGATCCTGACTTTGCACTAGGTGAACCCAGCGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGTTCGGTA
TCGACTCACTGGCGTCATGTAGCATTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTGCTAACAAC
AATCAGTCGGTTGAACACCTCATTTCTTTGCTTCAACACTGCTCTTCCTGCGCTCATACTCTGAATCTTTTACTG
TCGCTCCCGTCTTTCGAGAATGCCAGGGAGGTCCTGCACACACTTACTCAAGCACTTTTCTCAAGTGAAATCAAG
GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTCTCGGTTGACCAGCCTT
CGTTCTCTGTACATCCTTGGTTATAACGCCTCAGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC
ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGTCAAAACATC
GAATTTTGCATTTATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCTGAACCTCTTATCCTTGGAAAGCTC
GAACGCTTGATTATGCCAGCTGGGCATGGTCTTCAGACTATAACGTCTGCGGGAAATTTGCTGATGCCCTCACTC
AAGTATTTGGAATTAGAGCATCGGGGTTTTCATGACCTCGACGTTTACCCCGACATCATCATCCACTTCTGTCGC
CAAGTATCTAAAACACTTGTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGACGCACTACGAATA
TTATTTAAATCCCTCCCACATCTTCGAGAGTTTCACGCTGAGGGCTGGATAGTTGCCCCCATCAATGTCATTCAA
GCGCTCATATCTTACAAGGACAACAACCGGGAGATTGATTGCTTGCCGCGCCTAACTACTTTGTCGCTGCATGAA
GAACCTAATGACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGCTCCTGGAGTTATTGAAGAGTAGGCGG
ACTAATGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCTTTATGGCTCTGACCCCGGAAATGAAAGAA
GAATTGAAATCCGTCGTCAATAATCATCAGACCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA
Transcript >AgabiH39|038290
ATGGAGTTTGTAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCCATACGCTAACAAATCTC
GTGCAAATCAACGAGCAAGTCAACAGCCTCAACGACCATATTCGCGACTTGTTCAAGATACGCAGCACTTTGCTT
CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTAAAATCTTGTCAAACATATTTCGCAAGTTG
GTCGATCCTGACTTTGCACTAGGTGAACCCAGCGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGTTCGGTA
TCGACTCACTGGCGTCATGTAGCATTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTGCTAACAAC
AATCAGTCGGTTGAACACCTCATTTCTTTGCTTCAACACTGCTCTTCCTGCGCTCATACTCTGAATCTTTTACTG
TCGCTCCCGTCTTTCGAGAATGCCAGGGAGGTCCTGCACACACTTACTCAAGCACTTTTCTCAAGTGAAATCAAG
GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTCTCGGTTGACCAGCCTT
CGTTCTCTGTACATCCTTGGTTATAACGCCTCAGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC
ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGTCAAAACATC
GAATTTTGCATTTATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCTGAACCTCTTATCCTTGGAAAGCTC
GAACGCTTGATTATGCCAGCTGGGCATGGTCTTCAGACTATAACGTCTGCGGGAAATTTGCTGATGCCCTCACTC
AAGTATTTGGAATTAGAGCATCGGGGTTTTCATGACCTCGACGTTTACCCCGACATCATCATCCACTTCTGTCGC
CAAGTATCTAAAACACTTGTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGACGCACTACGAATA
TTATTTAAATCCCTCCCACATCTTCGAGAGTTTCACGCTGAGGGCTGGATAGTTGCCCCCATCAATGTCATTCAA
GCGCTCATATCTTACAAGGACAACAACCGGGAGATTGATTGCTTGCCGCGCCTAACTACTTTGTCGCTGCATGAA
GAACCTAATGACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGCTCCTGGAGTTATTGAAGAGTAGGCGG
ACTAATGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCTTTATGGCTCTGACCCCGGAAATGAAAGAA
GAATTGAAATCCGTCGTCAATAATCATCAGACCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA
Gene >AgabiH39|038290
ATGGAGTTTGTAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCCATACGCTAACAAATCTC
GTGCAAATCAACGAGCAAGTCAACAGCCTCAACGACCATATTCGCGACTTGTTCAAGATACGCAGCACTTTGCTT
CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTAAAATCTTGTCAAACATATTTCGCAAGTTG
GTCGATCCTGACTTTGCACTAGGTGAACCCAGCGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGTTCGGTA
TCGACTCACTGGCGTCATGTAGCATTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTGCTAACAAC
AATCAGTCGGTTGAACACCTCATTTCTTTGCTTCAACACTGCTCTTCCTGCGCTCATACTCTGAATCTTTTACTG
TCGCTCCCGTCTTTCGAGAATGCCAGGGAGGTCCTGCACACACTTACTCAAGCACTTTTCTCAAGTGAAATCAAG
GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTCTCGGTTGACCAGCCTT
CGTTCTCTGTACATCCTTGGTTATAACGCCTCAGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC
ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGTCAAAACATC
GAATTTTGCATTTATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCTGAACCTCTTATCCTTGGAAAGCTC
GAACGCTTGATTATGCCAGCTGGGCATGGTCTTCAGACTATAACGTCTGCGGGAAATTTGCTGATGCCCTCACTC
AAGTATTTGGAATTAGAGCATCGGGGTTTTCATGACCTCGACGTTTACCCCGACATCATCATCCACTTCTGTCGC
CAAGTATCTAAAACACTTGTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGACGCACTACGAATA
TTATTTAAATCCCTCCCACATCTTCGAGAGTTTCACGCTGAGGGCTGGATAGTTGCCCCCATCAATGTCATTCAA
GCGCTCATATCTTACAAGGACAACAACCGGGAGATTGATTGCTTGCCGCGCCTAACTACTTTGTCGCTGCATGAA
GAACCTAATGACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGCTCCTGGAGTTATTGAAGAGTAGGCGG
ACTAATGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCTTTATGGCTCTGACCCCGGAAATGAAAGAA
GAATTGAAATCCGTCGTCAATAATCATCAGACCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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