Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|037880
Gene name
Locationscaffold_13:1223236..1224910
Strand+
Gene length (bp)1674
Transcript length (bp)1623
Coding sequence length (bp)1623
Protein length (aa) 541

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.8E-05 41 94

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 67 89 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup10492
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|037880 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|037880

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|037880
MRDMNNLDDNDKNLRAVVMKCWEEEKENEENDNNSKVSTRVLPPELLSVVFLYVCAEESFARNNRHSIFLLASVC
SYWRALVLGMTFLWSRLTLTVNPDSQGDPSVLQYFLDNVKQTPFALCLLFSQKQEYFSVPLGRMSAIEALLLKDR
NRGKLETLRIEGFSLALCGYLPRFQSICRLEIGGIPYLNYWQPGSLQPLDLSNLSGLNQVEFYSSGCSLGVVMPW
AQITSLTLKSEDIYVCVFFVTQCPNLQEFHCFSPLKSNTRVSYPEIVDNFTSEKVENLSWTSNPEQKCVMLFSRL
RLPSLRSLQWYSRSYRRSDIRPDEASALHNLFSGSAFTLSCFRLHNAGSWTIDFIKTILSRAKNLRVLHLTKCKY
KFVIDTLSVLRHEPGGDTFLPHLETLIIQEPEGSIRPSERERQEIQLASHIIPIFQNRDLEKKKSFSLQLSQTAG
LHSKDMRTVYNALRSEGYAFNIWVDSAMTCSVKEVLEHERWKKGMRNVPMVSGTQWYTSRNDEDENQDWDDEPST
RLIREAAGCSLSPTI*
Coding >AgabiH39|037880
ATGCGCGACATGAACAATCTTGACGATAACGACAAAAATTTGAGGGCCGTTGTAATGAAGTGCTGGGAAGAAGAG
AAGGAGAATGAGGAGAATGACAACAATTCCAAAGTTTCAACTCGAGTCCTGCCCCCCGAACTGCTTTCTGTAGTA
TTCCTATACGTATGCGCGGAAGAAAGCTTCGCCAGAAACAACCGACACAGCATCTTTCTACTCGCGTCAGTATGC
TCCTATTGGCGAGCCCTGGTTCTGGGCATGACTTTCCTGTGGTCGCGTCTAACCTTGACAGTCAATCCAGACTCT
CAAGGAGATCCCTCAGTACTTCAGTACTTCCTCGATAATGTCAAACAGACCCCTTTCGCACTTTGCTTGCTATTT
TCGCAAAAACAAGAATACTTCTCTGTACCTCTCGGGCGTATGTCTGCGATTGAGGCTCTGCTGTTGAAAGATAGA
AATAGGGGCAAGCTAGAGACCCTCCGAATAGAGGGTTTCTCCCTCGCCTTGTGTGGTTATCTCCCCCGATTCCAG
TCCATCTGTCGTCTTGAGATTGGTGGCATCCCATATTTAAATTACTGGCAACCCGGTTCTCTTCAACCACTCGAT
CTGTCCAACCTCTCTGGCTTGAATCAAGTTGAATTTTACTCGTCAGGGTGCTCTCTGGGTGTTGTTATGCCCTGG
GCTCAAATCACGTCCTTGACACTCAAATCCGAAGACATCTATGTATGCGTGTTCTTCGTCACTCAATGCCCCAAC
CTTCAAGAATTCCACTGTTTTTCTCCTCTGAAATCCAATACGCGGGTCTCTTATCCTGAAATTGTTGATAACTTC
ACTTCTGAAAAAGTGGAGAACCTTTCATGGACCTCCAACCCAGAACAGAAATGTGTGATGCTCTTCTCAAGGCTC
CGACTCCCATCGCTACGATCTCTTCAATGGTACAGTCGATCTTATCGAAGGTCTGATATTCGACCCGACGAAGCA
TCCGCTCTACACAACCTTTTCTCCGGTTCTGCGTTCACATTATCTTGTTTCCGACTCCACAACGCAGGATCATGG
ACAATCGATTTCATCAAAACCATTCTCTCTCGCGCCAAGAACTTACGAGTTTTACACCTCACCAAATGCAAATAC
AAATTCGTCATCGACACCCTTTCTGTTCTCAGACACGAACCCGGTGGTGACACCTTTCTTCCTCATCTAGAAACC
CTCATCATACAAGAACCCGAAGGATCCATCCGCCCATCAGAAAGGGAAAGACAAGAAATTCAACTGGCATCGCAT
ATCATTCCTATATTCCAAAATCGGGACCTCGAGAAGAAGAAATCGTTTTCGCTGCAGCTTTCACAGACTGCTGGA
TTACATTCGAAAGATATGCGAACGGTGTATAATGCGCTGCGTTCGGAAGGTTATGCGTTTAATATTTGGGTTGAT
TCGGCGATGACATGTTCTGTGAAGGAGGTTTTGGAGCATGAGAGGTGGAAGAAGGGAATGAGGAATGTTCCTATG
GTGTCGGGGACTCAATGGTATACGTCACGTAACGACGAGGATGAGAACCAGGATTGGGATGATGAACCAAGTACT
CGGTTGATTAGAGAAGCTGCTGGTTGTTCCTTGTCTCCTACAATTTGA
Transcript >AgabiH39|037880
ATGCGCGACATGAACAATCTTGACGATAACGACAAAAATTTGAGGGCCGTTGTAATGAAGTGCTGGGAAGAAGAG
AAGGAGAATGAGGAGAATGACAACAATTCCAAAGTTTCAACTCGAGTCCTGCCCCCCGAACTGCTTTCTGTAGTA
TTCCTATACGTATGCGCGGAAGAAAGCTTCGCCAGAAACAACCGACACAGCATCTTTCTACTCGCGTCAGTATGC
TCCTATTGGCGAGCCCTGGTTCTGGGCATGACTTTCCTGTGGTCGCGTCTAACCTTGACAGTCAATCCAGACTCT
CAAGGAGATCCCTCAGTACTTCAGTACTTCCTCGATAATGTCAAACAGACCCCTTTCGCACTTTGCTTGCTATTT
TCGCAAAAACAAGAATACTTCTCTGTACCTCTCGGGCGTATGTCTGCGATTGAGGCTCTGCTGTTGAAAGATAGA
AATAGGGGCAAGCTAGAGACCCTCCGAATAGAGGGTTTCTCCCTCGCCTTGTGTGGTTATCTCCCCCGATTCCAG
TCCATCTGTCGTCTTGAGATTGGTGGCATCCCATATTTAAATTACTGGCAACCCGGTTCTCTTCAACCACTCGAT
CTGTCCAACCTCTCTGGCTTGAATCAAGTTGAATTTTACTCGTCAGGGTGCTCTCTGGGTGTTGTTATGCCCTGG
GCTCAAATCACGTCCTTGACACTCAAATCCGAAGACATCTATGTATGCGTGTTCTTCGTCACTCAATGCCCCAAC
CTTCAAGAATTCCACTGTTTTTCTCCTCTGAAATCCAATACGCGGGTCTCTTATCCTGAAATTGTTGATAACTTC
ACTTCTGAAAAAGTGGAGAACCTTTCATGGACCTCCAACCCAGAACAGAAATGTGTGATGCTCTTCTCAAGGCTC
CGACTCCCATCGCTACGATCTCTTCAATGGTACAGTCGATCTTATCGAAGGTCTGATATTCGACCCGACGAAGCA
TCCGCTCTACACAACCTTTTCTCCGGTTCTGCGTTCACATTATCTTGTTTCCGACTCCACAACGCAGGATCATGG
ACAATCGATTTCATCAAAACCATTCTCTCTCGCGCCAAGAACTTACGAGTTTTACACCTCACCAAATGCAAATAC
AAATTCGTCATCGACACCCTTTCTGTTCTCAGACACGAACCCGGTGGTGACACCTTTCTTCCTCATCTAGAAACC
CTCATCATACAAGAACCCGAAGGATCCATCCGCCCATCAGAAAGGGAAAGACAAGAAATTCAACTGGCATCGCAT
ATCATTCCTATATTCCAAAATCGGGACCTCGAGAAGAAGAAATCGTTTTCGCTGCAGCTTTCACAGACTGCTGGA
TTACATTCGAAAGATATGCGAACGGTGTATAATGCGCTGCGTTCGGAAGGTTATGCGTTTAATATTTGGGTTGAT
TCGGCGATGACATGTTCTGTGAAGGAGGTTTTGGAGCATGAGAGGTGGAAGAAGGGAATGAGGAATGTTCCTATG
GTGTCGGGGACTCAATGGTATACGTCACGTAACGACGAGGATGAGAACCAGGATTGGGATGATGAACCAAGTACT
CGGTTGATTAGAGAAGCTGCTGGTTGTTCCTTGTCTCCTACAATTTGA
Gene >AgabiH39|037880
ATGCGCGACATGAACAATCTTGACGATAACGACAAAAATTTGAGGGCCGTTGTAATGAAGTGCTGGGAAGAAGAG
AAGGAGAATGAGGAGAATGACGTAACCTTTCAACGCATTCGAACCAGACATCCTGCTCACTTGTGAAAGCAGAAC
AATTCCAAAGTTTCAACTCGAGTCCTGCCCCCCGAACTGCTTTCTGTAGTATTCCTATACGTATGCGCGGAAGAA
AGCTTCGCCAGAAACAACCGACACAGCATCTTTCTACTCGCGTCAGTATGCTCCTATTGGCGAGCCCTGGTTCTG
GGCATGACTTTCCTGTGGTCGCGTCTAACCTTGACAGTCAATCCAGACTCTCAAGGAGATCCCTCAGTACTTCAG
TACTTCCTCGATAATGTCAAACAGACCCCTTTCGCACTTTGCTTGCTATTTTCGCAAAAACAAGAATACTTCTCT
GTACCTCTCGGGCGTATGTCTGCGATTGAGGCTCTGCTGTTGAAAGATAGAAATAGGGGCAAGCTAGAGACCCTC
CGAATAGAGGGTTTCTCCCTCGCCTTGTGTGGTTATCTCCCCCGATTCCAGTCCATCTGTCGTCTTGAGATTGGT
GGCATCCCATATTTAAATTACTGGCAACCCGGTTCTCTTCAACCACTCGATCTGTCCAACCTCTCTGGCTTGAAT
CAAGTTGAATTTTACTCGTCAGGGTGCTCTCTGGGTGTTGTTATGCCCTGGGCTCAAATCACGTCCTTGACACTC
AAATCCGAAGACATCTATGTATGCGTGTTCTTCGTCACTCAATGCCCCAACCTTCAAGAATTCCACTGTTTTTCT
CCTCTGAAATCCAATACGCGGGTCTCTTATCCTGAAATTGTTGATAACTTCACTTCTGAAAAAGTGGAGAACCTT
TCATGGACCTCCAACCCAGAACAGAAATGTGTGATGCTCTTCTCAAGGCTCCGACTCCCATCGCTACGATCTCTT
CAATGGTACAGTCGATCTTATCGAAGGTCTGATATTCGACCCGACGAAGCATCCGCTCTACACAACCTTTTCTCC
GGTTCTGCGTTCACATTATCTTGTTTCCGACTCCACAACGCAGGATCATGGACAATCGATTTCATCAAAACCATT
CTCTCTCGCGCCAAGAACTTACGAGTTTTACACCTCACCAAATGCAAATACAAATTCGTCATCGACACCCTTTCT
GTTCTCAGACACGAACCCGGTGGTGACACCTTTCTTCCTCATCTAGAAACCCTCATCATACAAGAACCCGAAGGA
TCCATCCGCCCATCAGAAAGGGAAAGACAAGAAATTCAACTGGCATCGCATATCATTCCTATATTCCAAAATCGG
GACCTCGAGAAGAAGAAATCGTTTTCGCTGCAGCTTTCACAGACTGCTGGATTACATTCGAAAGATATGCGAACG
GTGTATAATGCGCTGCGTTCGGAAGGTTATGCGTTTAATATTTGGGTTGATTCGGCGATGACATGTTCTGTGAAG
GAGGTTTTGGAGCATGAGAGGTGGAAGAAGGGAATGAGGAATGTTCCTATGGTGTCGGGGACTCAATGGTATACG
TCACGTAACGACGAGGATGAGAACCAGGATTGGGATGATGAACCAAGTACTCGGTTGATTAGAGAAGCTGCTGGT
TGTTCCTTGTCTCCTACAATTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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