Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|037670
Gene name
Locationscaffold_13:1139455..1142360
Strand-
Gene length (bp)2905
Transcript length (bp)1581
Coding sequence length (bp)1581
Protein length (aa) 527

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02055 Glyco_hydro_30 Glycosyl hydrolase family 30 TIM-barrel domain 5.6E-25 68 329
PF02057 Glyco_hydro_59 Glycosyl hydrolase family 59 1.4E-13 77 326

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7M4T0|NEG1_NEUCR Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=neg-1 PE=1 SV=2 47 428 4.0E-40
sp|Q4WBR2|NEG1_ASPFU Endo-1,6-beta-D-glucanase neg1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=neg1 PE=1 SV=1 47 410 4.0E-36
sp|Q8J0I9|GUN16_TRIHA Endo-1,6-beta-D-glucanase BGN16.3 OS=Trichoderma harzianum PE=1 SV=1 47 403 3.0E-34
sp|O16581|GLCM2_CAEEL Putative glucosylceramidase 2 OS=Caenorhabditis elegans GN=gba-2 PE=3 SV=2 58 407 5.0E-22
sp|G5ECR8|GLCM3_CAEEL Putative glucosylceramidase 3 OS=Caenorhabditis elegans GN=gba-3 PE=3 SV=1 56 416 7.0E-21
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Swissprot ID Swissprot Description Start End E-value
sp|Q7M4T0|NEG1_NEUCR Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=neg-1 PE=1 SV=2 47 428 4.0E-40
sp|Q4WBR2|NEG1_ASPFU Endo-1,6-beta-D-glucanase neg1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=neg1 PE=1 SV=1 47 410 4.0E-36
sp|Q8J0I9|GUN16_TRIHA Endo-1,6-beta-D-glucanase BGN16.3 OS=Trichoderma harzianum PE=1 SV=1 47 403 3.0E-34
sp|O16581|GLCM2_CAEEL Putative glucosylceramidase 2 OS=Caenorhabditis elegans GN=gba-2 PE=3 SV=2 58 407 5.0E-22
sp|G5ECR8|GLCM3_CAEEL Putative glucosylceramidase 3 OS=Caenorhabditis elegans GN=gba-3 PE=3 SV=1 56 416 7.0E-21
sp|Q9UB00|GLCM4_CAEEL Putative glucosylceramidase 4 OS=Caenorhabditis elegans GN=gba-4 PE=3 SV=2 49 422 1.0E-20
sp|P17439|GLCM_MOUSE Glucosylceramidase OS=Mus musculus GN=Gba PE=1 SV=1 49 364 9.0E-19
sp|Q2KHZ8|GLCM_BOVIN Glucosylceramidase OS=Bos taurus GN=GBA PE=2 SV=1 49 364 3.0E-18
sp|O16580|GLCM1_CAEEL Putative glucosylceramidase 1 OS=Caenorhabditis elegans GN=gba-1 PE=1 SV=2 52 407 6.0E-18
sp|P04062|GLCM_HUMAN Glucosylceramidase OS=Homo sapiens GN=GBA PE=1 SV=3 43 364 4.0E-17
sp|Q9BDT0|GLCM_PANTR Glucosylceramidase OS=Pan troglodytes GN=GBA PE=3 SV=1 49 364 3.0E-16
sp|Q5R8E3|GLCM_PONAB Glucosylceramidase OS=Pongo abelii GN=GBA PE=2 SV=1 49 364 3.0E-16
sp|Q70KH2|GLCM_PIG Glucosylceramidase OS=Sus scrofa GN=GBA PE=3 SV=1 64 364 2.0E-14
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GO

GO Term Description Terminal node
GO:0006683 galactosylceramide catabolic process Yes
GO:0004336 galactosylceramidase activity Yes
GO:0009056 catabolic process No
GO:0046477 glycosylceramide catabolic process No
GO:0009987 cellular process No
GO:0044242 cellular lipid catabolic process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0044248 cellular catabolic process No
GO:0008152 metabolic process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No
GO:0043603 cellular amide metabolic process No
GO:0019374 galactolipid metabolic process No
GO:0003824 catalytic activity No
GO:1901575 organic substance catabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:1901136 carbohydrate derivative catabolic process No
GO:0019376 galactolipid catabolic process No
GO:0044238 primary metabolic process No
GO:1901135 carbohydrate derivative metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0016042 lipid catabolic process No
GO:1903509 liposaccharide metabolic process No
GO:0046479 glycosphingolipid catabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0046514 ceramide catabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0006629 lipid metabolic process No
GO:0006687 glycosphingolipid metabolic process No
GO:0006664 glycolipid metabolic process No
GO:0046466 membrane lipid catabolic process No
GO:0006672 ceramide metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0006665 sphingolipid metabolic process No
GO:0019377 glycolipid catabolic process No
GO:1901565 organonitrogen compound catabolic process No
GO:0006677 glycosylceramide metabolic process No
GO:0044237 cellular metabolic process No
GO:0006681 galactosylceramide metabolic process No
GO:0044255 cellular lipid metabolic process No
GO:0030149 sphingolipid catabolic process No
GO:0006643 membrane lipid metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 16 0.999687

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH30_3 4.9E-115 53 407

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup854
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|037670 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|113520
Agaricus bisporus var bisporus H97 AgabiH97|037670
Agaricus bisporus var bisporus H97 AgabiH97|113520
Rhodonia placenta FPRL280 RhoplFPRL280|202_6
Rhodonia placenta FPRL280 RhoplFPRL280|47_12
Rhodonia placenta FPRL280 RhoplFPRL280|47_16

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|037670
MQQFAIILILASCVSAQYAIWDTWSTTWERSNLFTSFKPNPPISFGPVSGTGQADIRIDDTSTFQSVWGFGGSLT
DSSALTLNNLKSRNSASYRSLLNYLFNPTDDMNAAGFSYMRIPLGASDFSASAYSYDDTPGDTSFNNFDINRTPS
YVFSVLNDIKAVNNIMRFHFIPWSPPGWMKDSGTMKGGALKPELVDEYATYLLKCVQGWNSKGFRAYAVSAQNEP
LNSNPTYPTSKLTAAQEAQIGLRLRSLLNSNGFSDTKIVGYDHNWSNAGGYPVQLMQDAGSAFDGVSFHCYAGNV
SQQDTFHSQFSDKQIYFTECSGTFGSDWWSDIKWYMDNIAIGSIERSSHTGLMWNIALDGSGNPKLPGTSSCGGP
GCRPLVTVNSDGTWSVNQEFYALAQASKAILPRDVGGPFGKRIGVSVGGELNWALRVSAFVTGRVDSSEWQRYSI
VVLNWDDSVGGWNPQPVRATIEFRGTQASYTFPVGVTTLWWYAPSTSFDVCGSSNTEEQGPLVFLNDQQGQVPLN
F*
Coding >AgabiH39|037670
ATGCAACAGTTTGCCATAATTCTGATTTTAGCAAGCTGTGTTTCCGCACAATACGCTATATGGGATACCTGGTCT
ACGACCTGGGAGCGTTCCAATCTCTTTACATCTTTCAAACCGAATCCTCCAATCTCATTCGGGCCTGTCTCTGGT
ACTGGCCAAGCTGATATCAGGATTGATGATACGTCGACGTTCCAATCCGTCTGGGGATTTGGCGGTTCTCTCACT
GATTCGTCTGCGCTGACGCTCAATAACCTAAAGTCCAGGAATTCGGCTAGCTACCGGAGCCTTCTCAACTACCTG
TTTAACCCTACAGATGATATGAACGCAGCAGGATTTAGCTATATGCGTATACCTTTGGGTGCTTCTGATTTTTCC
GCGTCTGCTTATAGTTATGATGACACTCCCGGCGACACATCCTTCAACAACTTTGATATCAATCGCACGCCTTCC
TACGTGTTTTCAGTTTTGAATGACATTAAAGCTGTTAACAACATCATGCGCTTCCATTTTATTCCTTGGTCACCC
CCTGGATGGATGAAGGACAGCGGCACAATGAAAGGAGGAGCGTTGAAACCGGAACTTGTCGATGAATATGCCACA
TACCTCCTGAAGTGTGTACAAGGCTGGAACTCTAAAGGCTTCAGAGCATATGCTGTATCCGCTCAGAATGAACCT
CTCAACTCGAATCCTACATATCCGACGTCCAAATTAACGGCTGCACAAGAAGCACAGATCGGTCTGAGACTTAGG
AGTCTATTGAATTCGAACGGATTTTCGGATACTAAAATCGTTGGATACGATCATAATTGGAGTAATGCTGGAGGC
TATCCTGTTCAATTAATGCAAGATGCTGGAAGCGCTTTTGACGGCGTGTCATTCCATTGTTATGCTGGAAACGTT
TCGCAGCAAGATACTTTCCATTCGCAGTTCAGTGACAAGCAAATATACTTTACAGAGTGCTCGGGAACGTTTGGC
AGCGATTGGTGGAGCGACATCAAGTGGTATATGGATAATATTGCTATAGGGTCGATCGAACGTAGTTCACATACG
GGCTTGATGTGGAATATCGCTTTGGATGGGTCTGGAAATCCCAAACTTCCAGGAACGAGTAGTTGCGGAGGTCCC
GGATGTCGTCCCCTTGTGACAGTCAATTCTGATGGTACTTGGAGTGTCAATCAAGAATTTTATGCTCTGGCACAA
GCGTCGAAAGCTATTTTACCTCGAGATGTTGGTGGTCCATTTGGAAAACGGATTGGAGTTAGTGTTGGTGGTGAA
CTTAATTGGGCGTTGAGAGTCTCGGCTTTTGTTACGGGAAGAGTTGATTCTTCTGAGTGGCAAAGGTATTCTATT
GTGGTTCTAAACTGGGATGACAGTGTAGGGGGATGGAACCCTCAACCTGTACGCGCAACAATCGAATTTAGAGGT
ACTCAGGCGTCCTATACTTTCCCAGTTGGAGTAACTACCCTATGGTGGTATGCGCCTTCAACTTCGTTCGACGTA
TGCGGTTCTTCGAATACCGAGGAACAAGGACCGCTGGTATTTTTGAATGATCAACAGGGTCAGGTTCCTCTCAAT
TTTTGA
Transcript >AgabiH39|037670
ATGCAACAGTTTGCCATAATTCTGATTTTAGCAAGCTGTGTTTCCGCACAATACGCTATATGGGATACCTGGTCT
ACGACCTGGGAGCGTTCCAATCTCTTTACATCTTTCAAACCGAATCCTCCAATCTCATTCGGGCCTGTCTCTGGT
ACTGGCCAAGCTGATATCAGGATTGATGATACGTCGACGTTCCAATCCGTCTGGGGATTTGGCGGTTCTCTCACT
GATTCGTCTGCGCTGACGCTCAATAACCTAAAGTCCAGGAATTCGGCTAGCTACCGGAGCCTTCTCAACTACCTG
TTTAACCCTACAGATGATATGAACGCAGCAGGATTTAGCTATATGCGTATACCTTTGGGTGCTTCTGATTTTTCC
GCGTCTGCTTATAGTTATGATGACACTCCCGGCGACACATCCTTCAACAACTTTGATATCAATCGCACGCCTTCC
TACGTGTTTTCAGTTTTGAATGACATTAAAGCTGTTAACAACATCATGCGCTTCCATTTTATTCCTTGGTCACCC
CCTGGATGGATGAAGGACAGCGGCACAATGAAAGGAGGAGCGTTGAAACCGGAACTTGTCGATGAATATGCCACA
TACCTCCTGAAGTGTGTACAAGGCTGGAACTCTAAAGGCTTCAGAGCATATGCTGTATCCGCTCAGAATGAACCT
CTCAACTCGAATCCTACATATCCGACGTCCAAATTAACGGCTGCACAAGAAGCACAGATCGGTCTGAGACTTAGG
AGTCTATTGAATTCGAACGGATTTTCGGATACTAAAATCGTTGGATACGATCATAATTGGAGTAATGCTGGAGGC
TATCCTGTTCAATTAATGCAAGATGCTGGAAGCGCTTTTGACGGCGTGTCATTCCATTGTTATGCTGGAAACGTT
TCGCAGCAAGATACTTTCCATTCGCAGTTCAGTGACAAGCAAATATACTTTACAGAGTGCTCGGGAACGTTTGGC
AGCGATTGGTGGAGCGACATCAAGTGGTATATGGATAATATTGCTATAGGGTCGATCGAACGTAGTTCACATACG
GGCTTGATGTGGAATATCGCTTTGGATGGGTCTGGAAATCCCAAACTTCCAGGAACGAGTAGTTGCGGAGGTCCC
GGATGTCGTCCCCTTGTGACAGTCAATTCTGATGGTACTTGGAGTGTCAATCAAGAATTTTATGCTCTGGCACAA
GCGTCGAAAGCTATTTTACCTCGAGATGTTGGTGGTCCATTTGGAAAACGGATTGGAGTTAGTGTTGGTGGTGAA
CTTAATTGGGCGTTGAGAGTCTCGGCTTTTGTTACGGGAAGAGTTGATTCTTCTGAGTGGCAAAGGTATTCTATT
GTGGTTCTAAACTGGGATGACAGTGTAGGGGGATGGAACCCTCAACCTGTACGCGCAACAATCGAATTTAGAGGT
ACTCAGGCGTCCTATACTTTCCCAGTTGGAGTAACTACCCTATGGTGGTATGCGCCTTCAACTTCGTTCGACGTA
TGCGGTTCTTCGAATACCGAGGAACAAGGACCGCTGGTATTTTTGAATGATCAACAGGGTCAGGTTCCTCTCAAT
TTTTGA
Gene >AgabiH39|037670
ATGCAACAGTTTGCCATAATTCTGATTTTAGCAAGCTGTGTTTCCGCACAATACGCTATATGGGATACCGTAAGT
ACCATTTGTTCTAATGACTATCGTCGTGAGGCAACACTATCCATTTCTAGTGGTCTACGACCTGGGAGCGTTCCA
ATCTCTTTACATCTTTCAAACCGAATCCTCCAATCTCATTCGGGCCTGTCTCTGGTACTGGCCAAGCTGATATCA
GGATTGATGATACGTCGACGTTCCAATCCGTCTGGGGATTTGGCGGTTCTCTCAGTTCGTTTTTCTGATGATCAG
CAATGAAGCTTCCTGCCTAAATCGTGTCTAGCTGATTCGTCTGCGCTGACGCTCAATAACCTAAAGGTAAGTGTA
AATCAGCCTCCAACTCTAAAGTCCGCCGAGCACTATATCTGATTCTGATTCTGACTGTTCCTTTTACTTCCCCAC
TGTTCAAAGTCCAGGAATTCGGCTAGCTACCGGAGCCTTCTCAACTACCTGTTTAACCCTACAGATGATATGAAC
GCAGCAGGATTTAGCTATATGCGTATACCTTTGGGTGCTTCTGATTTTTCCGCGTCTGGTGAGAGTTGGCTGCAC
TTAGTTTCTTTTGGATTTATTCCTGACTTATTTTGATAGCTTATAGTTATGATGACACTCCCGGCGACACATCCT
TCAACAACTTTGATATCAATCGCACGCCTTCCTACGTGTTTTCAGTTTTGAATGACATTAAAGCTGTTAACAACA
GTCAGTTGGTTTCGCTATCGCTGCTTATATATATTCCTAATCTGGGGAATTCTTTGGTAGTCATGCGCTTCCATT
TTATTCCTTGGTCACCCGTAAGCCACTCTGCTTTTTATCAAAGAACCTATGGATCGTTGATCATATATTAGCCTG
GATGGATGAAGGACAGCGGCACAATGAAAGGAGGAGCGTTGAAACCGGAACTTGTCGATGAATGTACGTATAAGT
ATTTTTGTTAACTCGGAAAGGGACACTGTGAACTGAAGGCCATACGGGATACAAAGATGCCACATACCTCCTGAA
GTGTGTACAAGGCTGGAACTCTAAAGGCTTCAGAGCATATGCTGTATCCGCTCAGAATGAACCTCTCAACTCGAA
TCCTACATATCCGACGTCCAAATTAACGGCTGCACAAGAAGCACAGATCGGTCTGAGACTTAGGAGTCTATTGAA
TTCGAACGGATTTTCGGATACTAAAATCGTTGGTGAGTCGGAGCTTTTTGGTGATACAGTGCTTTTGCAGAGAAG
GGACTCCAGTGGAGAGGGTATCGCATGGTGGGTGGGTCACTGGTGGTGGAGAAAAAATACCTCCGATCCATCCCC
ATTCTTTAGAGTGGCGGTAACCTCTTCTTTCTTCACCTTCCATGTGCTTCACCTTTTATTTTTTTTCTCCATACG
TAAAGGAAGGCTTTCTTCAATATAGTTTGCTGATCCGTTTTCTCGTGATATGCATATAGGATACGATCATAATTG
GAGTAATGCTGGAGGCTATCCTGTTCAATTAATGCAAGATGCTGGAAGCGCTTTTGACGGCGTGTCATTCCATTG
TTATGCTGTGAGTTTTGTCCCTCTCTCCTTTGCAAAAGGGTTAACGTCATGCTTAATTTATGACATCAGGGAAAC
GTTTCGCAGCAAGATACTTTCCATTCGCAGTTCAGTGACAAGGTTCGTTCTGAGCGTCGGAATTGTTATTCCGGG
TTAATTAATGCTCTATAAATTGCTGTTAGCAAATATACTTTACAGGTAAAAGTTTAAAGCCTTTCGAAAGGCTTG
ATAATTGATTTCTGATGATGTTCTTCATTCCAGAGTGCTCGGGAACGTTTGGCAGCGATTGGTGGAGCGACATCA
AGGTAAAAAAAAATCTCTTTGTGAAATCTTTCCTTTGTTGATGTAATTGATTAGTGGTATATGGATAATATGTGA
GTTGTATACCTTTTGATGCCTTCCAAAAAAGCTTCTCATGTTTTGATATGGTAGTGCTATAGGTAAGCGGCGAAG
TACCTCTTATTGATTAAAATTGAATTCGTATATCAGGGTCGATCGAACGTAGTTCACATACGGGCTTGATGTGGA
ATATCGCTTTGGATGGGTCTGGAAATCCCAAACTTCCAGGAACGAGTAGTTGCGGAGGTCCCGGATGTCGTCCCC
TTGTGACAGTCAATTCTGATGGTACTTGGAGTGTCAATCAAGAATGTAAGTTTCGAGTTTTTTATTCTTCCTATC
TCATCGCAAGGCACGATACACTATGACTAATGGATTTGTTTCCTCGAATATTCTATGTGATCAGTTTATGCTCTG
GCACAAGCGTCGAAAGCTATTTTACCTCGAGATGTTGGTGGTCCATTTGGAAAACGGATTGGAGTTAGTGTTGGT
GGTGAACTTAATTGGGCGTTGAGAGTCTCGGCTTTTGTTACGGGAAGAGTTGATTCTTCTGAGTGGCAAAGGTAT
TCTATTGTGGTTCTAAACTGTGAGTGTTTCATCGATATTATATTATGTTAATTGTTGTTTGATACACGCTTGCAT
TCATAGGGGATGACAGTGTAGGGGGATGGAACCCTCAACCTGTACGCGCAACAATCGAATTTAGAGGTACTCAGG
TAAGTTTTCGAGAATTGAGGAAAAGTGGAATGGAAGGTTGATGGTTTTTGTCAAATAGGCGTCCTATACTTTCCC
AGTTGGAGTAACTACCCTATGGTGGTATGGTACGTACAATGAATACTAAGCCGATACAGTGTTGGTAACGCTCAC
ATTTTTTTTTCCTGCTTCTTCATCAGCGCCTTCAACTTCGTTCGACGTATGCGGTTCTTCGAATACCGAGGAACA
AGGACCGCTGGTATTTTTGAATGATCAACAGGGTCAGGTTCCTCTCAATTTTTGA

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