Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|037300
Gene name
Locationscaffold_13:1050781..1052839
Strand+
Gene length (bp)2058
Transcript length (bp)1884
Coding sequence length (bp)1884
Protein length (aa) 628

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 4.8E-09 40 82

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup12267
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|037300 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|037300

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|037300
MTKFVEAERQYTNMTYDLIPSAISRLELDDTPHWTLRVTPELLSDIFTWCIETNEEASFNVSQVCRRWRCIALST
PQLWRKLPFRKWFSDVTEECRFITFLSEDYLLRSGGMPITFSWHPWHPLAQDLFQVLLQHVERWGDVNLVAHDKL
SIYISNLQDHLQSLYALKVTITNDSGSVSLQPFQSAPKLRCFSLIDRRADTDVPVLVNGAPWNQVTHISLSLDTT
HNFDYHSLSLFSNLTYLHIHWPRWTLIPEAIAREHLRKPLIFKSCRYLQLDFSLPRGVIHNAPFSNPLQNMYFPK
LEYLYIDYDATSFTDPYTLTELESFIGRLKTRNATPLKSFHWYRHCNYYANPTPAPPHVAATQSRTVFRLLPKTL
SNLRVTLFPRFLLEKLFNVLTTEGTFLPELKTLDLGIDVSVLISPGEFDWFCDKLKLMMATTKRQLHEFRIQLLL
VSPIPRFPIPPWQIIFRLDGWKDILRDDVERNLGCSIGREEDEFMSGTDAESIWVKNLRRALLEFMRSDDVLSQH
NRFRTNPLFRLETINRWLKLFKTNANSRRWTSLGHDGIMYVSPHSSLRESESWVYGVADDPSDAEDIRYIDNDRV
PGVPCSWLDVRDLTMYFSPNNVSLTTW*
Coding >AgabiH39|037300
ATGACAAAATTCGTAGAAGCTGAAAGGCAGTATACAAACATGACGTACGATCTCATTCCTTCAGCAATATCTCGT
CTCGAACTTGATGATACACCTCATTGGACTCTTCGAGTTACTCCTGAACTCCTTTCCGACATCTTCACATGGTGT
ATAGAAACCAACGAAGAGGCTTCATTTAACGTCTCTCAAGTTTGTCGTCGATGGAGGTGCATCGCTTTGTCTACT
CCTCAACTTTGGCGTAAACTTCCTTTCCGCAAATGGTTCTCTGATGTTACTGAAGAATGCCGGTTCATCACTTTT
CTCTCTGAAGATTATTTATTGAGATCCGGGGGGATGCCTATCACTTTCTCTTGGCACCCGTGGCACCCACTGGCG
CAAGATCTATTTCAGGTCTTACTTCAACATGTCGAACGATGGGGAGACGTAAATCTGGTCGCGCACGATAAATTA
AGTATCTACATTTCCAATCTCCAAGATCATTTGCAATCCTTGTATGCTCTTAAAGTCACTATAACCAACGACAGT
GGTTCTGTTTCACTTCAGCCATTCCAGTCCGCTCCCAAATTACGATGTTTCTCACTCATTGATCGCCGGGCCGAT
ACCGACGTCCCTGTATTAGTAAACGGAGCGCCCTGGAATCAAGTAACTCACATCTCTCTCTCGCTCGATACCACG
CACAATTTCGACTACCACTCGCTATCCTTATTTTCAAATCTCACTTATCTGCATATTCATTGGCCACGGTGGACT
TTGATCCCAGAGGCCATTGCTCGCGAACACTTGAGAAAACCACTCATCTTCAAATCGTGTCGCTACCTCCAGTTG
GATTTCTCACTCCCTCGCGGAGTCATCCACAATGCACCCTTTTCCAATCCCCTCCAGAACATGTACTTCCCCAAA
CTCGAATATCTTTACATCGACTACGACGCCACGTCATTCACCGATCCGTACACGCTCACTGAACTAGAATCCTTC
ATCGGAAGACTGAAAACTCGTAATGCCACTCCGCTCAAGAGCTTTCATTGGTACCGACATTGCAACTACTATGCG
AATCCGACACCGGCGCCGCCACATGTTGCAGCCACTCAGTCTCGAACAGTATTCCGTCTATTACCAAAAACCCTT
TCAAACCTCCGCGTTACATTATTCCCTCGGTTTTTATTGGAGAAATTGTTCAATGTTCTTACGACCGAGGGCACT
TTCCTACCGGAATTGAAGACGTTGGATCTTGGAATCGATGTTAGCGTACTGATCTCGCCAGGAGAGTTTGACTGG
TTTTGCGATAAACTCAAACTCATGATGGCGACTACCAAGAGACAATTACACGAGTTTCGGATTCAGTTGTTACTG
GTTTCTCCAATACCACGGTTTCCTATTCCCCCGTGGCAAATTATTTTTAGGCTTGATGGTTGGAAGGATATACTT
CGAGATGACGTGGAGCGGAACTTGGGGTGTTCTATAGGTAGGGAGGAGGATGAATTCATGAGCGGCACAGACGCT
GAATCAATCTGGGTCAAAAATTTACGAAGAGCTCTACTTGAATTTATGCGTTCCGATGACGTACTCTCACAGCAC
AACCGTTTTCGAACAAATCCCCTTTTCAGACTTGAAACCATTAACAGGTGGTTGAAACTGTTCAAAACGAATGCT
AATTCACGGCGATGGACCTCGCTAGGTCATGATGGCATTATGTATGTTTCGCCTCATTCTTCGCTACGAGAATCA
GAATCATGGGTATATGGGGTTGCAGATGACCCAAGTGATGCTGAGGATATTCGATATATTGACAATGATCGTGTT
CCCGGTGTTCCATGCTCGTGGTTGGATGTCCGGGATTTAACCATGTACTTCTCGCCCAACAATGTGAGCTTGACC
ACCTGGTAG
Transcript >AgabiH39|037300
ATGACAAAATTCGTAGAAGCTGAAAGGCAGTATACAAACATGACGTACGATCTCATTCCTTCAGCAATATCTCGT
CTCGAACTTGATGATACACCTCATTGGACTCTTCGAGTTACTCCTGAACTCCTTTCCGACATCTTCACATGGTGT
ATAGAAACCAACGAAGAGGCTTCATTTAACGTCTCTCAAGTTTGTCGTCGATGGAGGTGCATCGCTTTGTCTACT
CCTCAACTTTGGCGTAAACTTCCTTTCCGCAAATGGTTCTCTGATGTTACTGAAGAATGCCGGTTCATCACTTTT
CTCTCTGAAGATTATTTATTGAGATCCGGGGGGATGCCTATCACTTTCTCTTGGCACCCGTGGCACCCACTGGCG
CAAGATCTATTTCAGGTCTTACTTCAACATGTCGAACGATGGGGAGACGTAAATCTGGTCGCGCACGATAAATTA
AGTATCTACATTTCCAATCTCCAAGATCATTTGCAATCCTTGTATGCTCTTAAAGTCACTATAACCAACGACAGT
GGTTCTGTTTCACTTCAGCCATTCCAGTCCGCTCCCAAATTACGATGTTTCTCACTCATTGATCGCCGGGCCGAT
ACCGACGTCCCTGTATTAGTAAACGGAGCGCCCTGGAATCAAGTAACTCACATCTCTCTCTCGCTCGATACCACG
CACAATTTCGACTACCACTCGCTATCCTTATTTTCAAATCTCACTTATCTGCATATTCATTGGCCACGGTGGACT
TTGATCCCAGAGGCCATTGCTCGCGAACACTTGAGAAAACCACTCATCTTCAAATCGTGTCGCTACCTCCAGTTG
GATTTCTCACTCCCTCGCGGAGTCATCCACAATGCACCCTTTTCCAATCCCCTCCAGAACATGTACTTCCCCAAA
CTCGAATATCTTTACATCGACTACGACGCCACGTCATTCACCGATCCGTACACGCTCACTGAACTAGAATCCTTC
ATCGGAAGACTGAAAACTCGTAATGCCACTCCGCTCAAGAGCTTTCATTGGTACCGACATTGCAACTACTATGCG
AATCCGACACCGGCGCCGCCACATGTTGCAGCCACTCAGTCTCGAACAGTATTCCGTCTATTACCAAAAACCCTT
TCAAACCTCCGCGTTACATTATTCCCTCGGTTTTTATTGGAGAAATTGTTCAATGTTCTTACGACCGAGGGCACT
TTCCTACCGGAATTGAAGACGTTGGATCTTGGAATCGATGTTAGCGTACTGATCTCGCCAGGAGAGTTTGACTGG
TTTTGCGATAAACTCAAACTCATGATGGCGACTACCAAGAGACAATTACACGAGTTTCGGATTCAGTTGTTACTG
GTTTCTCCAATACCACGGTTTCCTATTCCCCCGTGGCAAATTATTTTTAGGCTTGATGGTTGGAAGGATATACTT
CGAGATGACGTGGAGCGGAACTTGGGGTGTTCTATAGGTAGGGAGGAGGATGAATTCATGAGCGGCACAGACGCT
GAATCAATCTGGGTCAAAAATTTACGAAGAGCTCTACTTGAATTTATGCGTTCCGATGACGTACTCTCACAGCAC
AACCGTTTTCGAACAAATCCCCTTTTCAGACTTGAAACCATTAACAGGTGGTTGAAACTGTTCAAAACGAATGCT
AATTCACGGCGATGGACCTCGCTAGGTCATGATGGCATTATGTATGTTTCGCCTCATTCTTCGCTACGAGAATCA
GAATCATGGGTATATGGGGTTGCAGATGACCCAAGTGATGCTGAGGATATTCGATATATTGACAATGATCGTGTT
CCCGGTGTTCCATGCTCGTGGTTGGATGTCCGGGATTTAACCATGTACTTCTCGCCCAACAATGTGAGCTTGACC
ACCTGGTAG
Gene >AgabiH39|037300
ATGACAAAATTCGTAGAAGCTGAAAGGCAGTATACAAACATGGTGCGTTCTCGAATAAAAGAACACTCAGATCGA
CATTTGACATAGTAATATTGTTTCGTAGACGTACGATCTCATTCCTTCAGCAATATCTCGTCTCGAACTTGATGA
TACACCTCATTGGACTCTTCGAGTTACTCCTGAACTCCTTTCCGACATCTTCACATGGTGTATAGAAACCAACGA
AGAGGCTTCATTTAACGTCTCTCAAGTTTGTCGTCGATGGAGGTGCATCGCTTTGTCTACTCCTCAACTTTGGCG
TAAACTTCCTTTCCGCAAATGGTTCTCTGATGTTACTGAAGAATGCCGGTTCATCACTTTTCTCTCTGAAGATTA
TTTATTGAGATCCGGGGGGATGCCTATCACTTTCTCTTGGCACCCGTGGCACCCACTGGCGCAAGATCTATTTCA
GGTCTTACTTCAACATGTCGAACGATGGGGAGACGTAAATCTGGTCGCGCACGATAAATTAAGTATCTACATTTC
CAATCTCCAAGATCATTTGCAATCCTTGTATGCTCTTAAAGTCACTATAACCAACGACAGTGGTTCTGTTTCACT
TCAGCCATTCCAGTCCGCTCCCAAATTACGATGTTTCTCACTCATTGATCGCCGGGCCGATACCGACGTCCCTGT
ATTAGTAAACGGAGCGCCCTGGAATCAAGTAACTCACATCTCTCTCTCGCTCGATACCACGCACAATTTCGACTA
CCACTCGCTATCCTTATTTTCAAATCTCACTTATCTGCATATTCATTGGCCACGGTGGACTTTGATCCCAGAGGC
CATTGCTCGCGAACACTTGAGAAAACCACTCATCTTCAAATCGTGTCGCTACCTCCAGTTGGATTTCTCACTCCC
TCGCGGAGTCATCCACAATGCACCCTTTTCCAATCCCCTCCAGAACATGTACTTCCCCAAACTCGAATATCTTTA
CATCGACTACGACGCCACGTCATTCACCGATCCGTACACGCTCACTGAACTAGAATCCTTCATCGGAAGACTGAA
AACTCGTAATGCCACTCCGCTCAAGAGCTTTCATTGGTACCGACATTGCAACTACTATGCGAATCCGACACCGGC
GCCGCCACATGTTGCAGCCACTCAGTCTCGAACAGTATTCCGTCTATTACCAAAAACCCTTTCAAACCTCCGCGT
TACATTATTCCCTCGGTTTTTATTGGAGAAATTGTTCAATGTTCTTACGACCGAGGGCACTTTCCTACCGGAATT
GAAGACGTTGGATCTTGGAATCGATGTTAGCGTACTGATCTCGCCAGGAGAGTTTGACTGGTTTTGCGATAAACT
CAAACTCATGATGGCGACTACCAAGAGACAATTACACGAGTTTCGGATTCAGTTGTTACTGGTTTCTCCAATACC
ACGGTTTCCTATTCCCCCGTGGCAAATTATTTTTAGGCTTGATGGTTGGAAGGATATACTTCGAGATGACGTGGA
GCGGAACTTGGGGTGTTCTATAGGTAGGGAGGAGGATGAATTCATGAGCGGCACAGACGCTGAATCAATCTGGGT
AAAGAAACCTACTTCTTTTCAATCCCGAAACCTGATGTCTTTCTTCTTGCAGGTCAAAAATTTACGAAGAGCTCT
ACTTGAATTTATGCGTTCCGATGACGTACTCTCACAGCACAACCGTTTTCGAACAAATCCCCTTTTCAGACTTGA
AACCATTAACAGGTGGTTGAAACTGTTCAAAACGAATGCTAATTCACGGCGATGGACCTCGCTAGGTCATGATGG
CATTATGTATGTTTCGCCTCATTCTTGTGAGTACAAATAGCATTTTATCCCCAAAGTTCTCAACCTCTGAGCCGC
TATGCTCTAGCGCTACGAGAATCAGAATCATGGGTATATGGGGTTGCAGATGACCCAAGTGATGCTGAGGATATT
CGATATATTGACAATGATCGTGTTCCCGGTGTTCCATGCTCGTGGTTGGATGTCCGGGATTTAACCATGTACTTC
TCGCCCAACAATGTGAGCTTGACCACCTGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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