Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|022930
Gene name
Locationscaffold_11a:440066..441755
Strand-
Gene length (bp)1689
Transcript length (bp)897
Coding sequence length (bp)897
Protein length (aa) 299

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 7.7E-15 163 248

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 67 22
3 77 99 22
4 112 134 22
5 154 176 22
6 197 219 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|022930
MGQYDLSLGVLLVGMFFNTYLFGIVSFQFIRYYVIGFKDPWWIRSSVAFLLVVDIFHSCAIVYMAWGYFVANFTN
TAIVGVALWPYTFTPIGTALAAVVTHMFLSYRIYRLNGLRWMFGVFIVLAAASLATGVASGTKAWLIKDLSKLSQ
LNILVEFWLIIQMVVDTGIAGVMAYVLWKSKTGFRNTDNVIHKLIRGAVQTGIFATIFAAGDLISFVTNPETNIY
GMFAIPLGRIYTNTLMHTLNLREDLKEQLTDTIELNSSRNNRSTGIQIKVQGHVTTRFDAVNSEPESIKRDWA*
Coding >AgabiH39|022930
ATGGGCCAGTACGATCTAAGTCTTGGAGTGCTCCTTGTGGGCATGTTTTTCAACACTTACCTTTTTGGTATTGTT
AGTTTCCAGTTCATTAGATACTATGTTATAGGCTTCAAAGACCCATGGTGGATCCGATCATCAGTGGCCTTCTTG
CTTGTCGTCGACATTTTTCACAGCTGCGCGATTGTGTACATGGCCTGGGGATACTTCGTGGCCAACTTCACGAAT
ACCGCGATTGTTGGAGTGGCTTTATGGCCTTATACATTCACGCCGATTGGAACTGCCTTAGCTGCCGTAGTGACG
CATATGTTTCTAAGTTACCGTATCTATCGTCTCAATGGGCTGCGTTGGATGTTTGGTGTTTTTATCGTCCTTGCC
GCGGCGTCGTTAGCCACTGGGGTGGCTTCTGGGACTAAAGCATGGTTGATTAAGGACCTGTCTAAGCTCAGTCAA
CTGAACATTTTGGTCGAATTTTGGCTGATCATCCAGATGGTGGTCGACACGGGCATTGCCGGTGTTATGGCCTAC
GTGCTCTGGAAGTCAAAAACCGGATTCAGGAACACAGACAACGTGATTCATAAGCTGATTCGCGGTGCCGTTCAA
ACAGGAATTTTTGCAACCATTTTCGCAGCTGGCGATCTCATAAGCTTCGTTACAAACCCCGAAACCAACATTTAC
GGCATGTTTGCGATTCCCCTCGGCCGTATCTATACAAATACCTTAATGCATACCCTTAATTTGCGAGAGGACTTG
AAGGAGCAACTCACGGACACTATTGAGTTGAATTCAAGTCGCAATAATCGAAGCACTGGCATTCAGATTAAGGTG
CAAGGCCATGTGACGACCCGCTTTGACGCCGTAAACTCTGAACCAGAATCTATAAAACGAGACTGGGCCTGA
Transcript >AgabiH39|022930
ATGGGCCAGTACGATCTAAGTCTTGGAGTGCTCCTTGTGGGCATGTTTTTCAACACTTACCTTTTTGGTATTGTT
AGTTTCCAGTTCATTAGATACTATGTTATAGGCTTCAAAGACCCATGGTGGATCCGATCATCAGTGGCCTTCTTG
CTTGTCGTCGACATTTTTCACAGCTGCGCGATTGTGTACATGGCCTGGGGATACTTCGTGGCCAACTTCACGAAT
ACCGCGATTGTTGGAGTGGCTTTATGGCCTTATACATTCACGCCGATTGGAACTGCCTTAGCTGCCGTAGTGACG
CATATGTTTCTAAGTTACCGTATCTATCGTCTCAATGGGCTGCGTTGGATGTTTGGTGTTTTTATCGTCCTTGCC
GCGGCGTCGTTAGCCACTGGGGTGGCTTCTGGGACTAAAGCATGGTTGATTAAGGACCTGTCTAAGCTCAGTCAA
CTGAACATTTTGGTCGAATTTTGGCTGATCATCCAGATGGTGGTCGACACGGGCATTGCCGGTGTTATGGCCTAC
GTGCTCTGGAAGTCAAAAACCGGATTCAGGAACACAGACAACGTGATTCATAAGCTGATTCGCGGTGCCGTTCAA
ACAGGAATTTTTGCAACCATTTTCGCAGCTGGCGATCTCATAAGCTTCGTTACAAACCCCGAAACCAACATTTAC
GGCATGTTTGCGATTCCCCTCGGCCGTATCTATACAAATACCTTAATGCATACCCTTAATTTGCGAGAGGACTTG
AAGGAGCAACTCACGGACACTATTGAGTTGAATTCAAGTCGCAATAATCGAAGCACTGGCATTCAGATTAAGGTG
CAAGGCCATGTGACGACCCGCTTTGACGCCGTAAACTCTGAACCAGAATCTATAAAACGAGACTGGGCCTGA
Gene >AgabiH39|022930
ATGGGCCAGTACGATCTAAGTCTTGGTAAATGCTCTTCATAACCGTTCAACATGAATAGTCACCTCACGTCTCTC
ATCAGGAGTGCTCCTTGTGGGCATGTTTTGTAAGCCTCGACCGAAGCCATACAGTCGCAGTCCATTACTGAGGTT
CTGCAGTCAACACTTACCTTTTTGGTATTGTTAGTTTCCAGTTCATTAGATACTATGTTATAGGTCAGTTGCCAT
CATCTCTCCGCTCAAAGCTAAAAGATAATTGATCTTCTTTAATTGATAGGCTTCAAAGACCCATGGTGGATCCGG
TAAGAGCGCTGTTTCAACATCACTTGAATGTTGATACGAATGCTGAAGGATTTTCCTAGATCATCAGTGGCCTTC
TTGCTTGTCGTCGACATTTTTCACAGCTGCGCGTACGTTGTTCCTTTGATATGTGATGTAGTCACCTTTCAACGG
GTGTTGTTAGGATTGTGTACATGGCCTGGGGATACTTGTACGTTATTCTAACATTCGCTTGTGCTCTCTCGATTG
CTTACAACAATTTCTATTCCTAGCGTGGCCAACTTCACGAATACCGCGATTGTTGGAGGCGAGCTGAATTTCTAT
GTCAAGGTTCACCGACATAGAAGACCTAACGTTTCTTCTTTCAGTGGCTTTATGGCCTTATACATTCACGCCGAT
TGGAACTGCCTTAGCTGCCGTAGTGACGCATATGTTTCTAAGTTACCGGTAAGCTTCTGAACAATTTTCGAGTAT
CTCCGTCGACTGTCAATCTGAAATTACTGATCAGTATCTATCGTCTCAATGGGCTGCGTTGGATGTTTGGTGTTT
TTATCGTCCTTGCCGCGGCGTCGTTAGCCACTGGGGTGGCTTCTGGGACTAAGTACGAGCAAATTTTCCCGTCTA
CTATAATCGGTCTTACTGAAACTACATTGCAGAGCATGGTTGATTAAGGAGTGAGTCGCAAACCATCCCGCATCA
GGGAAAGACTTCATTAACGCTGTAATCAGCCTGTCTAAGCTCAGTCAACTGAACATTTTGGTCGAATTTTGGCTG
ATCATCCAGATGGTGGTCGACACGGGCATTGCCGGTATGTTCATCATCCGTGACGCACATTGCATGGACTAATGG
AATATAGGTGTTATGGCCTACGTGCTCTGGAAGTCAAAAACCGGATTCAGGAACACAGACAACGTGATTCATAAG
CTGATTCGCGGTGCCGTTCAAACAGGAATTTTTGCAACCATTTTCGCAGCTGGCGATCTCATAAGCTTCGGTAAG
TCATGAAAATGGTTGTTCAAAAGCAGGAAAGTGAGGAAATCGATTTGCGCATCAGTTACAAACCCCGAAACCAAC
ATTTACGGCATGTTTGCGATTCCCCTCGGCCGTATCTATACAAATGTAAGTCCATCTCTGTCCTTTCGTTTGATT
TTCTCTGAATCTCAAGTTGATAGACCTTAATGCATACCCTTAATTTGCGAGAGGACTTGAAGGAGCAACTCACGG
ACACTATTGAGTTGAATTCAGTGAGTGTAGTGGATTTGTGAAGTAACACGACCCAAATATACTCATCCCGAATTT
CAGAGTCGCAATAATCGAAGCACTGGCATTCAGATTAAGGTGCAAGGCCATGTGACGACCCGCTTTGACGCCGTA
AACTCTGAACCAGAATCTATAAAACGAGACTGGGCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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