Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|022570
Gene name
Locationscaffold_11a:356862..358184
Strand-
Gene length (bp)1322
Transcript length (bp)1095
Coding sequence length (bp)1095
Protein length (aa) 365

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19086 Terpene_syn_C_2 Terpene synthase family 2, C-terminal metal binding 1.3E-34 83 269
PF03936 Terpene_synth_C Terpene synthase family, metal binding domain 8.3E-07 148 267

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 14 338 4.0E-75
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 6 336 2.0E-42
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 13 337 1.0E-36
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 28 337 4.0E-18
sp|Q55012|PENA_STREX Pentalenene synthase OS=Streptomyces exfoliatus GN=penA PE=1 SV=4 23 319 1.0E-16
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|P0DL13|PRO1_ARMGA Delta(6)-protoilludene synthase OS=Armillaria gallica GN=PRO1 PE=1 SV=1 14 338 4.0E-75
sp|A8NE23|COP3_COPC7 Alpha-muurolene synthase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP3 PE=1 SV=1 6 336 2.0E-42
sp|A8NU13|COP4_COPC7 Linoleate 10R-lipoxygenase COP4 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=COP4 PE=1 SV=1 13 337 1.0E-36
sp|Q6WP50|BOT2_BOTFU Presilphiperfolan-8-beta-ol synthase OS=Botryotinia fuckeliana GN=BOT2 PE=1 SV=1 28 337 4.0E-18
sp|Q55012|PENA_STREX Pentalenene synthase OS=Streptomyces exfoliatus GN=penA PE=1 SV=4 23 319 1.0E-16
sp|E3VWJ0|PNTA_STRAE Pentalenene synthase OS=Streptomyces arenae GN=pntA PE=3 SV=1 23 319 8.0E-16
sp|B2J4A4|GERAS_NOSP7 Germacrene A synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R3832 PE=1 SV=1 53 319 8.0E-15
sp|Q82IY4|PTLA_STRAW Pentalenene synthase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlA PE=1 SV=1 23 319 2.0E-14
sp|J9R393|MTS13_SELML Microbial Terpene synthase-like protein 13 OS=Selaginella moellendorffii GN=SELMODRAFT_412537 PE=2 SV=2 27 321 5.0E-12
sp|Q9X839|CYC2_STRCO Germacradienol/geosmin synthase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=cyc2 PE=1 SV=3 123 277 4.0E-09
sp|J9R1J8|MTS1_SELML Microbial Terpene synthase-like protein 1 OS=Selaginella moellendorffii GN=SELMODRAFT_402353 PE=1 SV=2 28 321 8.0E-09
sp|Q03471|ARIS_PENRO Aristolochene synthase OS=Penicillium roqueforti GN=ARI1 PE=1 SV=1 21 319 5.0E-06
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GO

GO Term Description Terminal node
GO:0000287 magnesium ion binding Yes
GO:0016829 lyase activity Yes
GO:0010333 terpene synthase activity Yes
GO:0005488 binding No
GO:0016838 carbon-oxygen lyase activity, acting on phosphates No
GO:0003824 catalytic activity No
GO:0043169 cation binding No
GO:0016835 carbon-oxygen lyase activity No
GO:0043167 ion binding No
GO:0003674 molecular_function No
GO:0046872 metal ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|022570
MVQTLTHNQPIDFLLPDFLAQWPYERRLHPDYGTVDVESAIWVNEHQFFVAKAQKSFDASRFGLLGCLIFPLNTK
DFCRTGCDLANVYFVIDEFTDVAEPQAAAQVCDGVMDVLRNPYKERNPGDKLGIFMQEFWQRALNLTDPGAACVK
HFIDGFDLYMKSMIQESEDRESKRVRPIDDYLQLRRETFGAQATIALLGFGLEIPEDVLSHPVMESMLLAAMDLL
CITNDMHSYSIELARGIAFHNIVSSIILEHGLSVPAAMSWLEDFGKSRVKVFLDGVEKLPSWGPEIDGRVREYID
SVGYLVRGADAWSYESERYWGNKGQEVQRTRVVTIVPKDSQQGLVTREELEATMQYTHTNELLV*
Coding >AgabiH39|022570
ATGGTTCAAACTCTCACTCACAACCAACCCATTGATTTCTTGTTGCCCGACTTCTTGGCCCAGTGGCCCTACGAA
CGACGTCTGCATCCCGATTATGGGACTGTCGATGTTGAGAGTGCCATTTGGGTAAATGAACACCAGTTCTTCGTT
GCGAAGGCACAAAAATCTTTCGACGCATCCCGCTTTGGTCTTTTGGGCTGTCTTATCTTTCCGCTAAACACCAAA
GATTTCTGTCGCACAGGCTGCGATCTAGCAAACGTTTACTTCGTCATTGATGAATTCACCGACGTCGCTGAACCT
CAGGCTGCGGCTCAAGTCTGCGATGGTGTGATGGATGTTCTCCGTAACCCGTATAAGGAGAGAAACCCAGGAGAC
AAATTGGGAATCTTCATGCAAGAGTTTTGGCAGCGGGCCCTCAACCTCACTGATCCAGGCGCCGCATGCGTCAAG
CACTTCATCGACGGTTTCGATTTATACATGAAGTCCATGATACAAGAATCAGAAGATCGTGAATCAAAGCGCGTT
CGACCTATCGATGACTATTTGCAGCTCCGCCGAGAGACTTTTGGTGCACAGGCAACCATTGCGCTTCTCGGATTT
GGATTAGAAATTCCTGAAGACGTGCTTTCTCACCCTGTTATGGAAAGCATGCTACTAGCTGCCATGGACCTCTTA
TGCATAACTAACGACATGCATTCGTATTCAATAGAGCTTGCACGTGGAATTGCCTTCCACAATATTGTTTCTTCC
ATCATCTTAGAACATGGGTTGAGCGTCCCTGCGGCTATGAGTTGGCTAGAGGATTTTGGAAAATCTAGAGTCAAG
GTATTTTTGGACGGTGTGGAGAAATTGCCGTCTTGGGGTCCGGAGATTGACGGCCGTGTACGAGAGTATATCGAT
TCCGTTGGGTATCTCGTCCGGGGCGCCGATGCATGGAGTTACGAATCGGAGAGGTACTGGGGAAACAAAGGTCAA
GAAGTTCAACGGACCCGAGTGGTCACAATCGTCCCAAAGGATAGCCAACAGGGTTTGGTTACGCGTGAAGAACTC
GAAGCTACGATGCAGTATACACATACAAATGAGTTGTTGGTATAA
Transcript >AgabiH39|022570
ATGGTTCAAACTCTCACTCACAACCAACCCATTGATTTCTTGTTGCCCGACTTCTTGGCCCAGTGGCCCTACGAA
CGACGTCTGCATCCCGATTATGGGACTGTCGATGTTGAGAGTGCCATTTGGGTAAATGAACACCAGTTCTTCGTT
GCGAAGGCACAAAAATCTTTCGACGCATCCCGCTTTGGTCTTTTGGGCTGTCTTATCTTTCCGCTAAACACCAAA
GATTTCTGTCGCACAGGCTGCGATCTAGCAAACGTTTACTTCGTCATTGATGAATTCACCGACGTCGCTGAACCT
CAGGCTGCGGCTCAAGTCTGCGATGGTGTGATGGATGTTCTCCGTAACCCGTATAAGGAGAGAAACCCAGGAGAC
AAATTGGGAATCTTCATGCAAGAGTTTTGGCAGCGGGCCCTCAACCTCACTGATCCAGGCGCCGCATGCGTCAAG
CACTTCATCGACGGTTTCGATTTATACATGAAGTCCATGATACAAGAATCAGAAGATCGTGAATCAAAGCGCGTT
CGACCTATCGATGACTATTTGCAGCTCCGCCGAGAGACTTTTGGTGCACAGGCAACCATTGCGCTTCTCGGATTT
GGATTAGAAATTCCTGAAGACGTGCTTTCTCACCCTGTTATGGAAAGCATGCTACTAGCTGCCATGGACCTCTTA
TGCATAACTAACGACATGCATTCGTATTCAATAGAGCTTGCACGTGGAATTGCCTTCCACAATATTGTTTCTTCC
ATCATCTTAGAACATGGGTTGAGCGTCCCTGCGGCTATGAGTTGGCTAGAGGATTTTGGAAAATCTAGAGTCAAG
GTATTTTTGGACGGTGTGGAGAAATTGCCGTCTTGGGGTCCGGAGATTGACGGCCGTGTACGAGAGTATATCGAT
TCCGTTGGGTATCTCGTCCGGGGCGCCGATGCATGGAGTTACGAATCGGAGAGGTACTGGGGAAACAAAGGTCAA
GAAGTTCAACGGACCCGAGTGGTCACAATCGTCCCAAAGGATAGCCAACAGGGTTTGGTTACGCGTGAAGAACTC
GAAGCTACGATGCAGTATACACATACAAATGAGTTGTTGGTATAA
Gene >AgabiH39|022570
ATGGTTCAAACTCTCACTCACAACCAACCCATTGATTTCTTGTTGCCCGACTTCTTGGCCCAGTGGCCCTACGAA
CGACGTCTGCATCCCGATTATGGGACTGTCGATGTTGAGAGTGCCATTTGGGTAAATGAACACCAGTTCTTCGTT
GCGAAGGCACAAAAATCTTTCGACGCATCCCGCTTTGGTCAGTGTGGCTACTATTGCATAAACATATCCCCAAAC
TGATCCTTGTGATTTCGATATAAAGGTCTTTTGGGCTGTCTTATCTTTCCGCTAAACACCAAAGGTACATTTTAC
CAAGTTGATCATCAACGCGAGTGGACGCTCACAAACATTTGTCAGATTTCTGTCGCACAGGCTGCGATCTAGCAA
ACGTTTACTTCGTCATTGATGAATTCACCGACGTCGCTGAACCTCAGGCTGCGGCTCAAGTCTGCGATGGTGTGA
TGGATGTTCTCCGTAACCCGTATAAGGAGAGAAACCCAGGAGACAAATTGGGAATCTTCATGCAAGAGTAAATTG
GTCTCTGCTATGGGTCAACAGTATCTGACATCCTTCGCAGGTTTTGGCAGCGGGCCCTCAACCTCACTGATCCAG
GCGCCGCATGCGTCAAGCACTTCATCGACGGTTTCGATTTATACATGAAGTCCATGATACAAGAATCAGAAGATC
GTGAATCAAAGCGCGTTCGACCTATCGATGACTATTTGCAGCTCCGCCGAGAGACTTTTGGTGCACAGGCAACCA
TTGCGCTTCTCGGATTTGGATTAGAAATTCCTGAAGACGTGCTTTCTCACCCTGTTATGGAAAGCATGCTACTAG
CTGCCATGGACCTCTTATGCATAACTAACGTGAGCACTTCATTGATCAAAGATCAAGCTCGCGAACGGTTCTAAT
AGCTACTTCCACAGGACATGCATTCGTATTCAATAGAGCTTGCACGTGGAATTGCCTTCCACAATATTGTTTCTT
CCATCATCTTAGAACATGGGTTGAGCGTCCCTGCGGCTATGAGTTGGCTAGAGGATTTTGGAAAATCTAGAGTCA
AGGTATTTTTGGACGGTGTGGAGAAATTGCCGTCTTGGGGTCCGGAGATTGACGGCCGTGTACGAGAGTATATCG
ATTCCGTTGGGTATCTCGTCCGGGGCGCCGATGCATGGAGTTACGAATCGGAGAGGTACTGGGGAAACAAAGGTC
AAGAAGTTCAACGGACCCGAGTGGTCACAATCGTCCCAAAGGATAGCCAACAGGGTTTGGTTACGCGTGAAGAAC
TCGAAGCTACGATGCAGTATACACATACAAATGAGTTGTTGGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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