Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|020260
Gene name
Locationscaffold_10:1379439..1381502
Strand+
Gene length (bp)2063
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 5.3E-17 159 246

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 47 66 19
3 86 108 22
4 115 137 22
5 152 174 22
6 195 217 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|020260
MPPSISLLFGPILIGALINAILYGVLVVQSLLYFQTYKKDNGWLKCLVFYLFIVETINSGLIIGLVYEPLILKYG
QSEAMTYFPLQPLMTVAASTPVQLFIAWRIIIISGKRHIPLIIGLFSLISTGGAIWLAYTVVDIREFSRKAELHW
PALTWLIAAMIADVIIAASLGYSLAKRRTGIAQTDDTINRIIRMTIQTGLVTAIFTILEVICFLLIPNSTLNFVW
DLALSKLYTNALLSTLNARTSFGMSTNVLFTEKSINRDVSTMLGVQVTLSGRSRSLDISPSGNGCGRTVENIEIG
VMSVKEVREI*
Coding >AgabiH39|020260
ATGCCACCATCAATATCACTCCTATTTGGACCGATTCTTATCGGCGCTCTTATCAATGCAATTCTATATGGCGTT
TTGGTAGTCCAGAGTCTTCTATACTTTCAGACTTACAAAAAGGACAACGGGTGGCTGAAATGTCTTGTTTTCTAT
CTGTTCATAGTAGAAACAATAAACTCGGGATTGATTATAGGATTGGTATATGAACCGCTAATTCTCAAGTACGGT
CAATCAGAAGCAATGACATATTTTCCTCTTCAACCACTCATGACGGTTGCAGCTTCAACACCAGTACAATTGTTC
ATCGCGTGGAGAATCATCATTATAAGTGGAAAGCGGCACATCCCCCTCATAATTGGATTATTCTCATTAATATCG
ACAGGTGGAGCTATATGGCTAGCGTATACCGTTGTTGATATCCGGGAATTCTCAAGAAAAGCTGAATTGCATTGG
CCCGCCTTGACTTGGTTAATCGCTGCCATGATTGCGGATGTGATAATCGCTGCTTCCTTAGGCTACAGCCTTGCG
AAAAGAAGAACTGGAATCGCTCAAACTGATGATACGATTAACAGAATTATCAGAATGACCATCCAAACCGGCCTT
GTAACCGCTATATTCACGATTTTGGAAGTGATATGTTTCCTTCTCATACCTAATTCAACTCTGAATTTTGTCTGG
GACCTTGCTTTATCTAAATTGTATACGAACGCGTTGCTATCGACTTTGAATGCGCGTACGAGCTTTGGGATGTCG
ACGAATGTGTTGTTTACGGAGAAGTCGATCAATAGAGATGTCAGTACCATGCTTGGAGTCCAAGTTACATTGTCA
GGGAGATCTAGATCATTAGATATATCACCTTCAGGAAATGGATGCGGGAGAACGGTCGAGAATATCGAGATAGGA
GTTATGTCTGTAAAAGAGGTCAGAGAAATATGA
Transcript >AgabiH39|020260
ATGCCACCATCAATATCACTCCTATTTGGACCGATTCTTATCGGCGCTCTTATCAATGCAATTCTATATGGCGTT
TTGGTAGTCCAGAGTCTTCTATACTTTCAGACTTACAAAAAGGACAACGGGTGGCTGAAATGTCTTGTTTTCTAT
CTGTTCATAGTAGAAACAATAAACTCGGGATTGATTATAGGATTGGTATATGAACCGCTAATTCTCAAGTACGGT
CAATCAGAAGCAATGACATATTTTCCTCTTCAACCACTCATGACGGTTGCAGCTTCAACACCAGTACAATTGTTC
ATCGCGTGGAGAATCATCATTATAAGTGGAAAGCGGCACATCCCCCTCATAATTGGATTATTCTCATTAATATCG
ACAGGTGGAGCTATATGGCTAGCGTATACCGTTGTTGATATCCGGGAATTCTCAAGAAAAGCTGAATTGCATTGG
CCCGCCTTGACTTGGTTAATCGCTGCCATGATTGCGGATGTGATAATCGCTGCTTCCTTAGGCTACAGCCTTGCG
AAAAGAAGAACTGGAATCGCTCAAACTGATGATACGATTAACAGAATTATCAGAATGACCATCCAAACCGGCCTT
GTAACCGCTATATTCACGATTTTGGAAGTGATATGTTTCCTTCTCATACCTAATTCAACTCTGAATTTTGTCTGG
GACCTTGCTTTATCTAAATTGTATACGAACGCGTTGCTATCGACTTTGAATGCGCGTACGAGCTTTGGGATGTCG
ACGAATGTGTTGTTTACGGAGAAGTCGATCAATAGAGATGTCAGTACCATGCTTGGAGTCCAAGTTACATTGTCA
GGGAGATCTAGATCATTAGATATATCACCTTCAGGAAATGGATGCGGGAGAACGGTCGAGAATATCGAGATAGGA
GTTATGTCTGTAAAAGAGGTCAGAGAAATATGA
Gene >AgabiH39|020260
ATGCCACCATCAATATCACTCCTGTGAGTCCTTCTCTACTACAAGTACCGACAGCATCAAAATAGTTTGACACAA
GTCTTTACGAAGATTTGGACCGATTCTTATCGGTGGGTCGATTCTTTTGAACCACTCATGTCGGAGACTTAGAAC
AAGGGGTATGACAAGGCGCTCTTATCAATGCAATTCTATATGGCGTATGTTCTATCTGGATATTTCTTTGGGGGA
CTTGAGCGATAATTCATGGTGAAAACTAGGTTTTGGTAGTCCAGGTGCGCAGTCGAGGAGTACGGAATAGCTGTG
CTCGATTAACAGACCTCCCTGTTCTGATGTCGGTCGCATGTCCCTTGAATAATATTAGAGTCTTCTATACTTTCA
GACTTACAAAAAGTGGGCTAGTTATTATTAGATTCTCCGAGTGCCAGAAAACTGACCATTGTAACAGGGACAACG
GGTGGCTGAAATGTCTTGTAAGTCTTACGGCGTCAACGAGCTATCGTTTGCCTAAGTTGTTTGCAAAGGTTTTCT
ATCTGTTCATAGTAGAAACAATAAACTCGGGATTGATTATAGGATTGGTATATGAACCGCTAATTCTCAAGTACG
GTGAGTCAACTCTCTCATTCTCACATAAGAGCATCGTCATTGTAACCGCATTCCTTTTCTTAGGTCAATCAGAAG
CAATGACATATTTTCCTCTTCGTAAGTCGATTACTTCTTTATCACAGGTTGGGTAGTGATACAAGTAGTTTTACC
TTCAGGTATTGACCACTCTTTGTCCATGTTCGCACTACTTAATTCCAAATGGTGCGCCGTATAGAACCACTCATG
ACGGTGCGTGCTTCATTAAGCTCAGGTCTAAATTCCTCGTCGCCTTCTGAAACGCACCCGGTTTTGATGTGTTCC
GGTCCTTTCGGTGAAAAAGGTAAAAGAATCCTGGGGTTCAACCTCAACATTAGGCACCGGGCGCTAATGCTTAAC
ATTTTGTTTGTATAGGTTGCAGCTTCAACACCAGTACAATTGTTCATCGCGTGGAGAATCATCATTATAAGTGGA
AAGCGGCACATCCCCCTCATAATTGGATTATTCTCATTAATATCGACAGGTTCGTGGTTCCACCCGTATTGATAA
CAATCGGTGATTTTCTTTTTCGTCCTAGGTGGAGCTATATGGCTAGCGTATACCGTTGTTGATATCCGGGAATTC
TCAAGAAAAGCTGAATTGCATTGGCCCGCCTTGACTTGGTTAATCGCTGCCATGATTGCGGATGTGATAATCGCT
GCTTCCTTAGGCTACAGCCTTGTCAGCTCATTTCATCATATTTTTCTACTTACTATTTTCGCTGATGTGATGCTT
GAACATTTGGTTTTAGGCGAAAAGAAGAACTGGAATCGCTCAAACTGATGATACGATTAACAGAGTTTGTGGAAT
CATCCATTTGTTAGTTCGGGTACTCGTCGACTAATGGTGGCGTGGTATAGATTATCAGAATGACCATCCAAACCG
GCCTTGTAACCGCTATATTCACGATTTTGGAAGTGATATGTTTCCTTCTCATACCTGTGAGTACCTTTCAAGTAC
GGTGACAAGTCTTCCGATTCATCGATTCTGTTATAGAATTCAACTCTGTAAGTTCCGGTTGATACACTCGAAAGA
AGCATCCCTGAATTCGTGGACCAAGGAATTTTGTCTGGGACCTTGCTTTATCTAAATTGTATACGAACGCGTTGC
TATCGACTTTGAATGCGCGTACGAGCTTTGGGATGTCGACGAATGTGTTGTTTACGGAGAAGTCGATCAATAGAG
ATGTCAGTACCATGCTTGGAGTGAGACTTTCATTTTCTGTGATAAAATGAATTCTCAGCTTACAGGATATTATTA
GGTCCAAGTTACATTGTCAGGGAGATCTAGAGTAAGTTTCAGAATTCTTATAAGATTTGATTATGTCTAAGGTTA
TGTGCTCACGTTTGTAGTCATTAGATATATCACCTTCAGGAAATGGATGCGGGAGAACGGTCGAGAATATCGAGA
TAGGAGTTATGTCTGTAAAAGAGGTCAGAGAAATATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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