Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|019950
Gene name
Locationscaffold_10:1302413..1303628
Strand-
Gene length (bp)1215
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 47 69 22
3 76 98 22
4 122 144 22
5 174 193 19
6 203 220 17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup1245
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|019720
Agaricus bisporus var bisporus H39 AgabiH39|019730
Agaricus bisporus var bisporus H39 AgabiH39|019740
Agaricus bisporus var bisporus H39 AgabiH39|019750
Agaricus bisporus var bisporus H39 AgabiH39|019950 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|020020
Agaricus bisporus var bisporus H39 AgabiH39|479900
Agaricus bisporus var bisporus H39 AgabiH39|539400
Agaricus bisporus var bisporus H97 AgabiH97|019720
Agaricus bisporus var bisporus H97 AgabiH97|019730
Agaricus bisporus var bisporus H97 AgabiH97|019740
Agaricus bisporus var bisporus H97 AgabiH97|019750
Agaricus bisporus var bisporus H97 AgabiH97|019950
Agaricus bisporus var bisporus H97 AgabiH97|020020
Agaricus bisporus var bisporus H97 AgabiH97|020210
Agaricus bisporus var bisporus H97 AgabiH97|034710

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|019950
MTMVVILLFIASSVHLALQLALVMRGYVYFSQSRGDDFQMERRKFIISQASLMIFETIIADGVLIFRCWTIWNKM
LLAIILPLVLWVGCLSSSVYAIYRLCTRTLFPQPTAIGPAEKLYSAFVTYWTCTIILNIYCTGMIVGRICSVQQG
WRPPTICSLQDLPQRSRLHLAKRIVIESAMMYTVASLCAFITHVCESPALDITYLAEAQIISIAFNLILIRREPL
DSQRRHRNNKLGLIYRNSTPNFGDGSFR*
Coding >AgabiH39|019950
ATGACGATGGTCGTAATCCTACTCTTCATCGCCTCCTCAGTACATCTGGCATTGCAGCTCGCTCTTGTTATGCGG
GGTTACGTATATTTTTCGCAGTCTCGTGGAGATGACTTTCAGATGGAACGAAGAAAGTTTATCATTTCCCAAGCA
TCCCTGATGATCTTCGAAACGATTATTGCTGATGGTGTCTTGATCTTTAGGTGCTGGACCATCTGGAATAAGATG
CTTCTTGCTATCATCCTACCTCTGGTTCTTTGGGTGGGCTGTCTGAGTTCTAGCGTCTATGCTATCTACAGGTTA
TGTACTCGGACTCTCTTTCCTCAGCCGACAGCAATAGGTCCTGCGGAAAAGCTTTATTCAGCCTTCGTGACGTAC
TGGACTTGCACCATTATCCTGAATATTTATTGTACAGGGATGATTGTGGGGAGAATTTGTTCTGTGCAACAGGGT
TGGAGACCACCCACCATATGTTCTTTACAGGATCTACCGCAACGAAGCCGACTGCATCTTGCCAAACGTATAGTC
ATCGAGTCGGCTATGATGTATACCGTGGCATCTTTATGTGCCTTTATCACCCACGTTTGCGAGAGTCCCGCACTT
GATATCACATATCTAGCCGAGGCCCAAATTATCTCTATCGCCTTCAACTTAATACTTATCAGACGCGAACCGCTC
GATAGTCAACGCCGCCATAGGAACAATAAGCTCGGGTTGATATATCGTAATTCGACCCCAAATTTCGGTGATGGT
AGCTTTCGTTAA
Transcript >AgabiH39|019950
ATGACGATGGTCGTAATCCTACTCTTCATCGCCTCCTCAGTACATCTGGCATTGCAGCTCGCTCTTGTTATGCGG
GGTTACGTATATTTTTCGCAGTCTCGTGGAGATGACTTTCAGATGGAACGAAGAAAGTTTATCATTTCCCAAGCA
TCCCTGATGATCTTCGAAACGATTATTGCTGATGGTGTCTTGATCTTTAGGTGCTGGACCATCTGGAATAAGATG
CTTCTTGCTATCATCCTACCTCTGGTTCTTTGGGTGGGCTGTCTGAGTTCTAGCGTCTATGCTATCTACAGGTTA
TGTACTCGGACTCTCTTTCCTCAGCCGACAGCAATAGGTCCTGCGGAAAAGCTTTATTCAGCCTTCGTGACGTAC
TGGACTTGCACCATTATCCTGAATATTTATTGTACAGGGATGATTGTGGGGAGAATTTGTTCTGTGCAACAGGGT
TGGAGACCACCCACCATATGTTCTTTACAGGATCTACCGCAACGAAGCCGACTGCATCTTGCCAAACGTATAGTC
ATCGAGTCGGCTATGATGTATACCGTGGCATCTTTATGTGCCTTTATCACCCACGTTTGCGAGAGTCCCGCACTT
GATATCACATATCTAGCCGAGGCCCAAATTATCTCTATCGCCTTCAACTTAATACTTATCAGACGCGAACCGCTC
GATAGTCAACGCCGCCATAGGAACAATAAGCTCGGGTTGATATATCGTAATTCGACCCCAAATTTCGGTGATGGT
AGCTTTCGTTAA
Gene >AgabiH39|019950
ATGACGATGGTCGTAATCCTACTCTTCATCGCCTCCTCAGTACATCTGGCATTGCAGCTCGCTCTTGTTATGCGG
GGTTACGTATATTTTTCGCAGTCTCGTGGAGATGACTTTCAGATGGAACGAAGAAAGTTTATCATTTCCCAAGTA
TGTTCCCTTACTTTGTTTGCCTAGTTGGCAGTGCTGATCTGGCTGTACTAGGCATCCCTGATGATCTTCGAAACG
ATTATTGCTGATGGTGTCTTGGTAAGGTTTCGAGGGAATGCCCTGGAGTAATCTGACAACTGGGCTCCAGATCTT
TAGGTGCTGGACCATCTGGAATAAGATGCTTCTTGCTATCATCCTACCTCTGGTTCTTTGGGTGGGCTGTCTGAG
TTCTAGCGTCTATGCTATCTACAGGTTATGTACTCGGACTCTCTTTCCTCAGCCGACAGCAATAGGTCCTGCGGA
AAAGCTTTATTCAGCCTTCGTGACGTACTGGACTTGCACCATTATCCTGAATATTTATTGTACAGGTAAGCCACT
TGTTTCTTTTTGAAAAGTACAGCATTTGATGCCATAAATAATTCTTTAGGGATGATTGTGGGGAGAATTTGTTCT
GTGCAACAGGGTTGGAGACCACCCACCATATGTTCTTTACAGGATCTACCGCAACGAAGCCGACTGCATCTTGCC
AAACGTATAGTCATCGAGTCGGCTATGATGTATACCGTGGCATCTTTATGTGCCTTTATCACCCACGTTTGCGAG
AGTCCCGCACTTGATATCACATATCTAGCCGTACGTCACCCGAATTTAGGATGGGTCACTTTCTGAACATGTTAG
ATAGGAGGCCCAAATTATCTCTATCGCCTTCAACTTAATACTTATCAGACGTTCGCCTTCCGAGCAGGATCGTCA
AAGCAAATTATGCGCCAGATGTTTCACTCCGAAGGCGAACCGCTCGATAGTCAACGCCGCCATAGGAACAATAAG
CTCGGGTTGATATATCGTAATTCGACCCCAAATGTGCGTTGCCGAGCGCCGGTAGTGGGATAATAGATCCAGGAA
AGAGCGGATACCATATACCGAATTTTAGCTCTGCCCGACTCCATAGGTATATTGTATTATTAAATCAGAACCGTT
GTAGTTCGGTGATGGTAGCTTTCGGTGAGTGAGCTTCTGGCCTCAATACACTCCTTTTTATTGATATCACCACTA
CGTTCATCAAGTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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