Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|019730
Gene name
Locationscaffold_10:1260073..1261244
Strand+
Gene length (bp)1171
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 44 66 22
3 79 101 22
4 121 143 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup1245
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|019720
Agaricus bisporus var bisporus H39 AgabiH39|019730 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|019740
Agaricus bisporus var bisporus H39 AgabiH39|019750
Agaricus bisporus var bisporus H39 AgabiH39|019950
Agaricus bisporus var bisporus H39 AgabiH39|020020
Agaricus bisporus var bisporus H39 AgabiH39|479900
Agaricus bisporus var bisporus H39 AgabiH39|539400
Agaricus bisporus var bisporus H97 AgabiH97|019720
Agaricus bisporus var bisporus H97 AgabiH97|019730
Agaricus bisporus var bisporus H97 AgabiH97|019740
Agaricus bisporus var bisporus H97 AgabiH97|019750
Agaricus bisporus var bisporus H97 AgabiH97|019950
Agaricus bisporus var bisporus H97 AgabiH97|020020
Agaricus bisporus var bisporus H97 AgabiH97|020210
Agaricus bisporus var bisporus H97 AgabiH97|034710

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|019730
MTMVVILLFICSTTVLGLQLALVMRSYMYLLQSREDDFETERRAFILSQGVLLIFQTIIADGVLLFRCWTIWNKM
ILAIVLPLVLWAGCLGSSVYAIYCLYFRIFTGPKPISTEESVYPAFVTFWTCTIIVNIYCTGMIVGRICSVQQGW
RPPSICSLRDLPQRTRLHLAKRIVVESAMIYTAASLGAFISHASESRAVDITYLAESQVVGIAFNLILIRRSSPT
QDRESELCVRCFNPKTNRSIADATVGTTDSLDIPDVSLSASEEDNRLERMNIIYRARPHTSSTNSLEEIH*
Coding >AgabiH39|019730
ATGACGATGGTCGTTATCCTCCTTTTCATCTGTTCCACAACTGTCTTGGGACTCCAGCTTGCCCTTGTTATGCGG
AGTTATATGTACTTGTTGCAGTCTCGTGAAGACGACTTTGAGACGGAACGAAGAGCGTTCATTCTCTCACAAGGG
GTCCTGCTGATTTTTCAGACAATCATTGCAGACGGCGTCTTGCTCTTCAGGTGTTGGACTATCTGGAATAAGATG
ATTCTTGCTATAGTTCTACCCCTGGTTCTTTGGGCAGGCTGTCTGGGTTCTAGCGTCTACGCTATTTACTGCTTA
TATTTTCGGATCTTCACGGGCCCGAAACCAATATCTACTGAGGAAAGTGTTTATCCAGCCTTCGTGACATTCTGG
ACTTGCACAATCATCGTGAACATTTACTGCACAGGAATGATTGTGGGGAGAATTTGTTCCGTGCAACAGGGTTGG
AGACCGCCCTCCATATGTTCTTTACGGGATCTACCACAACGAACCCGACTGCATCTTGCCAAACGTATAGTCGTC
GAGTCGGCTATGATATATACCGCGGCATCATTGGGCGCCTTTATCAGTCATGCTTCTGAGAGCCGCGCAGTTGAC
ATCACATATCTAGCCGAATCTCAAGTTGTCGGGATTGCTTTCAATTTGATACTTATCAGACGTTCGTCTCCGACG
CAGGACCGGGAAAGCGAATTATGCGTCAGATGTTTTAATCCGAAGACGAATCGCTCGATAGCTGACGCTACGGTC
GGAACCACAGACTCGCTTGATATACCAGATGTGTCATTGAGCGCTAGTGAGGAAGATAACAGATTGGAAAGAATG
AATATCATATACCGTGCCAGACCTCATACTAGTTCCACCAACTCGCTCGAAGAAATTCATTGA
Transcript >AgabiH39|019730
ATGACGATGGTCGTTATCCTCCTTTTCATCTGTTCCACAACTGTCTTGGGACTCCAGCTTGCCCTTGTTATGCGG
AGTTATATGTACTTGTTGCAGTCTCGTGAAGACGACTTTGAGACGGAACGAAGAGCGTTCATTCTCTCACAAGGG
GTCCTGCTGATTTTTCAGACAATCATTGCAGACGGCGTCTTGCTCTTCAGGTGTTGGACTATCTGGAATAAGATG
ATTCTTGCTATAGTTCTACCCCTGGTTCTTTGGGCAGGCTGTCTGGGTTCTAGCGTCTACGCTATTTACTGCTTA
TATTTTCGGATCTTCACGGGCCCGAAACCAATATCTACTGAGGAAAGTGTTTATCCAGCCTTCGTGACATTCTGG
ACTTGCACAATCATCGTGAACATTTACTGCACAGGAATGATTGTGGGGAGAATTTGTTCCGTGCAACAGGGTTGG
AGACCGCCCTCCATATGTTCTTTACGGGATCTACCACAACGAACCCGACTGCATCTTGCCAAACGTATAGTCGTC
GAGTCGGCTATGATATATACCGCGGCATCATTGGGCGCCTTTATCAGTCATGCTTCTGAGAGCCGCGCAGTTGAC
ATCACATATCTAGCCGAATCTCAAGTTGTCGGGATTGCTTTCAATTTGATACTTATCAGACGTTCGTCTCCGACG
CAGGACCGGGAAAGCGAATTATGCGTCAGATGTTTTAATCCGAAGACGAATCGCTCGATAGCTGACGCTACGGTC
GGAACCACAGACTCGCTTGATATACCAGATGTGTCATTGAGCGCTAGTGAGGAAGATAACAGATTGGAAAGAATG
AATATCATATACCGTGCCAGACCTCATACTAGTTCCACCAACTCGCTCGAAGAAATTCATTGA
Gene >AgabiH39|019730
ATGACGATGGTCGTTATCCTCCTTTTCATCTGTTCCACAACTGTCTTGGGACTCCAGCTTGCCCTTGTTATGCGG
AGTTATATGTACTTGTTGCAGTCTCGTGAAGACGACTTTGAGACGGAACGAAGAGCGTTCATTCTCTCACAAGTA
AGCTTTCCCCTTTTTCTTTGGCCCGATTGCGAGCCTGAGTTGTCGCGGACAATGCGTTAACGTCCAGCCATATTA
GGGGGTCCTGCTGATTTTTCAGACAATCATTGCAGACGGCGTCTTGGTAAGACTTTGAATTGATACCTGGGGGAA
AAACTGACAATTGGGAACTTCAGCTCTTCAGGTGTTGGACTATCTGGAATAAGATGATTCTTGCTATAGTTCTAC
CCCTGGTTCTTTGGGCAGGCTGTCTGGGTTCTAGCGTCTACGCTATTTACTGCTTATATTTTCGGATCTTCACGG
GCCCGAAACCAATATCTACTGAGGAAAGTGTTTATCCAGCCTTCGTGACATTCTGGACTTGCACAATCATCGTGA
ACATTTACTGCACAGGTAAGCCACCTAACCTGGAAAAACGTAACTTTATCATCGACTTACAATTTTGTAGGAATG
ATTGTGGGGAGAATTTGTTCCGTGCAACAGGGTTGGAGACCGCCCTCCATATGTTCTTTACGGGATCTACCACAA
CGAACCCGACTGCATCTTGCCAAACGTATAGTCGTCGAGTCGGCTATGATATATACCGCGGCATCATTGGGCGCC
TTTATCAGTCATGCTTCTGAGAGCCGCGCAGTTGACATCACATATCTAGCCGTAGGTCACCCGGTTGTAGGACCG
ATCACTCTCTTATCATGTTGAACAGGAATCTCAAGTTGTCGGGATTGCTTTCAATTTGATACTTATCAGACGTTC
GTCTCCGACGCAGGACCGGGAAAGCGAATTATGCGTCAGATGTTTTAATCCGAAGACGAATCGCTCGATAGCTGA
CGCTACGGTCGGAACCACAGACTCGCTTGATATACCAGATGTGTCATTGAGCGCTAGTGAGGAAGATAACAGATT
GGAAAGAATGAATATCATATACCGTGCCAGACCTCATACTAGGTGTATTGTATCACTTAATCAGAATTGTTCATA
GTCCGGTTATTGTAGTTCCACCAACTCGCTCGAAGAAATTCATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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