Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|014270
Gene name
Locationscaffold_01:3616562..3618790
Strand-
Gene length (bp)2228
Transcript length (bp)1953
Coding sequence length (bp)1953
Protein length (aa) 651

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 9.2E-08 3 39
PF00646 F-box F-box domain 7.0E-07 2 40

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup1379
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|014270 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|014270
Rhodonia placenta FPRL280 RhoplFPRL280|47_3

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|014270
MLLSLPSELLLSILRHLSLPDLATCILTCKAFKAVIDDCESTVYRQAAAHPSLRLIPHDEVLFSELVPLGLVSSR
FLGKAKTWKQLCRRACDVRQSWLGRGPSRTKSLHNNYHTVHRIKVDEERGFFITTHGSQAIVPFGVFNPNSGGLV
VADITDGTPIWIMYSPRIRSHAHCEYAEGFLVFDRYNGMKEIWRLVSDDLNLRAPEPCEVVPQSQPDERQLSQEH
IISAPGSRFKFVPHALIRPVDDIQTNAYRLSYPTLLSAGGGCLFMWDVRTGKLVERMNDIESQSPASLGTQHLNH
PDGDNVLDGIRYVDVNDKYAFVCGRRSIKAFRRHTHPDPSSTATQSGSSDGSPTACCVMALFQSDLKREGKWAYE
AQYVEEYELSLGILLPASPESEPSTVDWLEDSHDEIPNEGDNRCVTESDEEEREENPGDEQIYLAPGRWRHPEKV
VVRHILAFTSLPVTPRPKVEYGFDQPCVAMHVSPCGEHLAILGPQGRLLIIPYFERVIDRHVEDITDIMIDIQLN
LSYSNSESIYLAYEHGRIAVVTSWGLYIIHPSFPAPDDFYTYPDIHVQRVATLNNTNILREVSCLQMTSTAVWLN
WHVELNPDGSVSSDYPSQIQSEESYERGTEVFGEIPRSLTVVSVDFGLGS*
Coding >AgabiH39|014270
ATGTTACTCAGTCTCCCTTCTGAATTGTTATTGTCTATTCTCCGCCACCTATCACTGCCTGATTTGGCTACGTGC
ATCCTTACTTGCAAAGCTTTCAAGGCTGTTATAGATGACTGTGAATCAACTGTATATCGCCAGGCAGCTGCACAC
CCAAGTTTGCGGTTGATTCCCCACGATGAAGTACTCTTCTCTGAACTCGTACCTCTTGGTCTTGTGTCGAGCCGA
TTTTTGGGCAAGGCAAAGACATGGAAGCAACTTTGTCGCAGAGCTTGTGACGTTCGGCAGAGTTGGCTTGGCAGA
GGACCATCGCGGACCAAAAGCCTCCATAATAATTACCATACCGTGCACCGCATCAAAGTTGACGAAGAACGAGGA
TTTTTTATCACGACTCATGGATCACAGGCAATAGTTCCGTTTGGCGTGTTTAACCCCAATTCGGGCGGGTTGGTA
GTGGCCGATATCACTGACGGCACACCAATATGGATAATGTACTCCCCCCGAATTCGTTCACATGCACATTGCGAA
TATGCCGAGGGCTTCCTTGTTTTCGATCGTTACAACGGTATGAAAGAAATTTGGCGACTTGTCAGCGACGATCTC
AATCTGCGCGCTCCTGAACCTTGCGAGGTAGTGCCCCAGTCACAACCTGATGAGCGTCAACTCAGCCAGGAGCAT
ATAATTTCTGCTCCTGGGAGTCGATTCAAATTTGTTCCACACGCGCTCATCCGTCCCGTTGATGATATTCAAACG
AATGCTTACAGATTGTCTTATCCGACATTACTGTCGGCCGGAGGCGGGTGCCTGTTTATGTGGGATGTGAGGACA
GGGAAGCTAGTCGAAAGGATGAATGACATTGAGTCCCAGTCACCTGCATCGCTTGGTACGCAACATTTAAATCAT
CCAGATGGCGATAACGTGCTTGATGGAATTCGCTACGTCGATGTGAACGACAAGTATGCGTTTGTATGTGGTAGA
CGAAGTATCAAAGCATTTCGACGGCATACTCATCCCGATCCTTCATCGACGGCGACGCAATCAGGTTCATCAGAT
GGGTCGCCAACTGCTTGTTGTGTGATGGCACTTTTCCAATCCGATCTCAAACGTGAAGGGAAATGGGCGTACGAA
GCCCAATACGTCGAAGAATATGAATTGTCTCTAGGAATTTTACTCCCCGCATCTCCCGAGTCCGAACCCAGTACC
GTAGACTGGTTGGAAGATTCACACGACGAGATACCCAATGAGGGTGATAATAGATGTGTTACTGAGAGTGACGAA
GAGGAGAGAGAAGAAAATCCGGGTGACGAACAAATCTATCTTGCTCCCGGTAGATGGCGACACCCCGAAAAAGTG
GTAGTGAGGCACATATTGGCTTTCACTTCTCTACCTGTGACACCAAGGCCAAAAGTCGAATATGGCTTCGATCAG
CCATGTGTGGCAATGCACGTTTCACCTTGTGGAGAGCATCTAGCCATTCTTGGTCCCCAAGGACGCTTGCTGATC
ATACCATACTTTGAGAGGGTCATTGATCGTCACGTTGAAGACATCACCGACATTATGATCGATATACAATTGAAT
CTCTCTTATTCTAATTCGGAATCGATATATCTCGCTTACGAGCATGGCAGGATTGCAGTCGTGACTTCTTGGGGT
CTTTACATCATCCATCCATCGTTCCCAGCTCCAGACGATTTCTATACTTATCCAGACATCCATGTTCAGAGGGTA
GCAACGTTGAACAACACCAATATCCTACGAGAAGTTTCGTGTCTACAAATGACTTCCACGGCAGTTTGGTTAAAT
TGGCATGTTGAACTGAACCCAGATGGGTCTGTTTCGAGTGATTATCCATCTCAGATCCAAAGTGAAGAGTCGTAT
GAAAGAGGTACTGAAGTGTTTGGTGAGATCCCGAGGTCATTAACTGTTGTTAGCGTTGATTTTGGGTTGGGATCG
TGA
Transcript >AgabiH39|014270
ATGTTACTCAGTCTCCCTTCTGAATTGTTATTGTCTATTCTCCGCCACCTATCACTGCCTGATTTGGCTACGTGC
ATCCTTACTTGCAAAGCTTTCAAGGCTGTTATAGATGACTGTGAATCAACTGTATATCGCCAGGCAGCTGCACAC
CCAAGTTTGCGGTTGATTCCCCACGATGAAGTACTCTTCTCTGAACTCGTACCTCTTGGTCTTGTGTCGAGCCGA
TTTTTGGGCAAGGCAAAGACATGGAAGCAACTTTGTCGCAGAGCTTGTGACGTTCGGCAGAGTTGGCTTGGCAGA
GGACCATCGCGGACCAAAAGCCTCCATAATAATTACCATACCGTGCACCGCATCAAAGTTGACGAAGAACGAGGA
TTTTTTATCACGACTCATGGATCACAGGCAATAGTTCCGTTTGGCGTGTTTAACCCCAATTCGGGCGGGTTGGTA
GTGGCCGATATCACTGACGGCACACCAATATGGATAATGTACTCCCCCCGAATTCGTTCACATGCACATTGCGAA
TATGCCGAGGGCTTCCTTGTTTTCGATCGTTACAACGGTATGAAAGAAATTTGGCGACTTGTCAGCGACGATCTC
AATCTGCGCGCTCCTGAACCTTGCGAGGTAGTGCCCCAGTCACAACCTGATGAGCGTCAACTCAGCCAGGAGCAT
ATAATTTCTGCTCCTGGGAGTCGATTCAAATTTGTTCCACACGCGCTCATCCGTCCCGTTGATGATATTCAAACG
AATGCTTACAGATTGTCTTATCCGACATTACTGTCGGCCGGAGGCGGGTGCCTGTTTATGTGGGATGTGAGGACA
GGGAAGCTAGTCGAAAGGATGAATGACATTGAGTCCCAGTCACCTGCATCGCTTGGTACGCAACATTTAAATCAT
CCAGATGGCGATAACGTGCTTGATGGAATTCGCTACGTCGATGTGAACGACAAGTATGCGTTTGTATGTGGTAGA
CGAAGTATCAAAGCATTTCGACGGCATACTCATCCCGATCCTTCATCGACGGCGACGCAATCAGGTTCATCAGAT
GGGTCGCCAACTGCTTGTTGTGTGATGGCACTTTTCCAATCCGATCTCAAACGTGAAGGGAAATGGGCGTACGAA
GCCCAATACGTCGAAGAATATGAATTGTCTCTAGGAATTTTACTCCCCGCATCTCCCGAGTCCGAACCCAGTACC
GTAGACTGGTTGGAAGATTCACACGACGAGATACCCAATGAGGGTGATAATAGATGTGTTACTGAGAGTGACGAA
GAGGAGAGAGAAGAAAATCCGGGTGACGAACAAATCTATCTTGCTCCCGGTAGATGGCGACACCCCGAAAAAGTG
GTAGTGAGGCACATATTGGCTTTCACTTCTCTACCTGTGACACCAAGGCCAAAAGTCGAATATGGCTTCGATCAG
CCATGTGTGGCAATGCACGTTTCACCTTGTGGAGAGCATCTAGCCATTCTTGGTCCCCAAGGACGCTTGCTGATC
ATACCATACTTTGAGAGGGTCATTGATCGTCACGTTGAAGACATCACCGACATTATGATCGATATACAATTGAAT
CTCTCTTATTCTAATTCGGAATCGATATATCTCGCTTACGAGCATGGCAGGATTGCAGTCGTGACTTCTTGGGGT
CTTTACATCATCCATCCATCGTTCCCAGCTCCAGACGATTTCTATACTTATCCAGACATCCATGTTCAGAGGGTA
GCAACGTTGAACAACACCAATATCCTACGAGAAGTTTCGTGTCTACAAATGACTTCCACGGCAGTTTGGTTAAAT
TGGCATGTTGAACTGAACCCAGATGGGTCTGTTTCGAGTGATTATCCATCTCAGATCCAAAGTGAAGAGTCGTAT
GAAAGAGGTACTGAAGTGTTTGGTGAGATCCCGAGGTCATTAACTGTTGTTAGCGTTGATTTTGGGTTGGGATCG
TGA
Gene >AgabiH39|014270
ATGTTACTCAGTCTCCCTTCTGAATTGTTATTGTCTATTCTCCGCCACCTATCACTGCCTGATTTGGCTACGTGC
ATCCTTACTTGCAAAGCTTTCAAGGCTGTTATAGATGACTGTGAATCAACTGTATATCGCCAGGCAGCTGCACAC
CCAAGTTTGCGGTTGATTCCCCACGATGAAGTACTCTTCTCTGAACTCGTACCTCTTGGTCTTGTGTCGAGCCGA
TTTTTGGGCAAGGCAAAGACATGGAAGCAACTTTGTGAGTAGCCCCTGCTGGCGCTGTCATTCGAACCCATTGAA
TTATCCAGGTCGCAGAGCTTGTGACGTTCGGCAGAGTTGGCTTGGCAGAGGACCATCGCGGACCAAAAGCCTCCA
TAATAATTACCATACCGTGCACCGCATCAAAGTTGACGAAGAACGAGGATTTTTTATCACGACTCATGGATCACA
GGCAATAGTTCCGTTTGGCGTGTTTAACCCCAATTCGGGCGGGTTGGTAGTGGCCGATATCACTGACGGCACACC
AATATGGATAATGTACTCCGTGAGTATCCAGTCTAATCTATCCATTGTGTTTTGATTTCTGATTAGAAACTTCGA
CCCAGCCCCGAATTCGTTCACATGCACATTGCGAATATGCCGAGGGCTTCCTTGTTTTCGATCGTTACAACGGTA
TGAAAGAAATTTGGCGACTTGTCAGCGACGATCTCAATCTGCGCGCTCCTGAACCTTGCGAGGTAGTGCCCCAGT
CACAACCTGATGAGCGTCAACTCAGCCAGGAGCATATAATTTCTGCTCCTGGGAGTCGATTCAAATTTGTTCCAC
ACGCGCTCATCCGTCCCGTTGATGATATTCAAACGAATGCTTACAGATTGTCTTATCCGACATTACTGTCGGCCG
GAGGCGGGTGCCTGTTTATGTGGGATGTGAGGACAGGGAAGCTAGTCGAAAGGATGAATGACATTGAGTCCCAGT
CACCTGCATCGCTTGGTACGCAACATTTAAATCATCCAGATGGCGATAACGTGCTTGATGGAATTCGCTACGTCG
ATGTGAACGACAAGTATGCGTTTGTATGTGGTAGACGAAGTATCAAAGCATTTCGACGGCATACTCATCCCGATC
CTTCATCGACGGCGACGCAATCAGGTTCATCAGATGGGTCGCCAACTGCTTGTTGTGTGATGGCACTTTTCCAAT
CCGATCTCAAACGTGAAGGGAAATGGGCGTACGAAGCCCAATACGTCGAAGAATATGAATTGTCTCTAGGAATTT
TACTCCCCGCATCTCCCGAGTCCGAACCCAGTACCGTAGACTGGTTGGAAGATTCACACGACGAGATACCCAATG
AGGGTGATAATAGATGTGTTACTGAGAGTGACGAAGAGGAGAGAGAAGAAAATCCGGGTGACGAACAAATCTATC
TTGCTCCCGGTAGATGGCGACACCCCGAAAAAGTGGTAGTGAGGCACATATTGGCTTTCACTTCTCTACCTGTGA
CACCAAGGCCAAAAGTCGAATATGGCTTCGATCAGCCATGTGTGGCAAGTCAGCATGCTCATTCATAAACGACTT
GAATCTTCGACGCTGATCTTCATTTCAGTGCACGTTTCACCTTGTGGAGAGCATCTAGCCATTCTTGGTCCCCAA
GGACGCTTGCTGATCATACCATACTTTGAGAGGGTCATTGATCGTCACGTTGAAGACATCACCGACATTATGATC
GATATACAATTGAATCTCTCTTATTCTAATTCGGAATCGATATATCTCGCTTACGAGCATGGCAGGATTGCAGTC
GTGACTGTACGCCTTTTTCATCCCTTGAATCCTATCGCATCCGTGATTGATCTATGTGTTTTGATATAGTCTTGG
GGTCTTTACATCATCCATCCATCGTTCCCAGCTCCAGACGATTTCTATACTTATCCAGACATCCATGTTCAGAGG
GTAGCAACGTTGAACAACACCAATATCCTACGAGAAGTTTCGTGTCTACAAATGACTTCCACGGCAGTTTGGTTA
AATTGGCATGTTGAACTGAACCCAGATGGGTCTGTTTCGAGTGATTATCCATCTCAGATCCAAAGTGAAGAGTCG
TATGAAAGAGGTACTGAAGTGTTTGGTGAGATCCGTAAGTACGAGCTTTTCATTTTGAATTTGATTACTGATTGT
GAGTAGCGAGGTCATTAACTGTTGTTAGCGTTGATTTTGGGTTGGGATCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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