Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH39|004100
Gene name
Locationscaffold_01:1113189..1114748
Strand+
Gene length (bp)1559
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 2.3E-15 163 247

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 67 22
3 82 104 22
4 116 138 22
5 158 177 19
6 203 225 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100 (this protein)
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH39|004100
MGDFDLIVGPLLIGLFFNTYLYGLVTYQFLVYKTTKFNDPTWIKIVVALLFVCDTLHSGVAVYAGWEMCVTNFNH
PELLIFVGWTIPFTACATAVAALLTQGFLAHRVLLLTKSKVITAIILVLSVVGFVFGMYAGVRCGIIDDSTKFAP
LKPYVGCWLGFQTAADISITAVLSYSLSRSRTGFRKTDTLINRLIRGAIQTGLFASIFALADLFSFTLAGTTTLY
AMFAYPIGRIYTNTLLDTLNARIELKRGTAGTIDAESGNTYSLQNHSRTLAPDASTHSIQVQKETVTDGASLDAK
YPIQ*
Coding >AgabiH39|004100
ATGGGTGATTTCGATCTAATTGTTGGCCCTTTGCTCATCGGCCTCTTTTTCAACACATATCTCTATGGTTTGGTC
ACATACCAATTCTTAGTTTATAAGACGACCAAATTCAATGATCCAACATGGATTAAGATCGTAGTGGCTCTGCTC
TTTGTGTGCGATACGCTGCACAGCGGTGTTGCTGTCTATGCCGGATGGGAGATGTGTGTTACCAATTTCAACCAC
CCCGAATTACTCATATTCGTTGGATGGACTATTCCGTTTACTGCCTGTGCCACAGCCGTGGCGGCGTTGCTTACA
CAAGGTTTCCTCGCTCACCGTGTATTGCTTTTGACAAAGAGCAAGGTGATCACAGCAATCATCCTTGTTCTCAGC
GTCGTAGGCTTTGTTTTCGGCATGTACGCTGGTGTACGCTGCGGAATTATCGATGATTCCACTAAATTTGCACCT
CTGAAGCCGTATGTCGGTTGCTGGCTTGGATTCCAGACTGCCGCCGATATCTCAATCACTGCTGTCTTGAGTTAC
TCGCTGTCTCGTTCCCGCACTGGTTTCCGCAAGACTGACACTCTCATCAACCGTCTTATCCGAGGAGCAATTCAG
ACGGGTCTCTTCGCTTCAATCTTTGCCTTGGCAGACTTGTTCAGTTTCACTTTGGCTGGGACTACTACGCTGTAT
GCCATGTTTGCTTACCCTATCGGTCGCATCTACACCAACACTTTGTTGGATACATTGAATGCTCGTATCGAGCTC
AAGAGGGGAACTGCAGGCACAATTGATGCTGAGAGTGGCAATACGTACAGTCTGCAGAACCACAGCCGTACCCTC
GCTCCAGATGCGTCTACCCATTCGATCCAGGTTCAGAAGGAAACTGTTACGGATGGCGCCAGTCTTGATGCCAAA
TACCCTATCCAGTGA
Transcript >AgabiH39|004100
ATGGGTGATTTCGATCTAATTGTTGGCCCTTTGCTCATCGGCCTCTTTTTCAACACATATCTCTATGGTTTGGTC
ACATACCAATTCTTAGTTTATAAGACGACCAAATTCAATGATCCAACATGGATTAAGATCGTAGTGGCTCTGCTC
TTTGTGTGCGATACGCTGCACAGCGGTGTTGCTGTCTATGCCGGATGGGAGATGTGTGTTACCAATTTCAACCAC
CCCGAATTACTCATATTCGTTGGATGGACTATTCCGTTTACTGCCTGTGCCACAGCCGTGGCGGCGTTGCTTACA
CAAGGTTTCCTCGCTCACCGTGTATTGCTTTTGACAAAGAGCAAGGTGATCACAGCAATCATCCTTGTTCTCAGC
GTCGTAGGCTTTGTTTTCGGCATGTACGCTGGTGTACGCTGCGGAATTATCGATGATTCCACTAAATTTGCACCT
CTGAAGCCGTATGTCGGTTGCTGGCTTGGATTCCAGACTGCCGCCGATATCTCAATCACTGCTGTCTTGAGTTAC
TCGCTGTCTCGTTCCCGCACTGGTTTCCGCAAGACTGACACTCTCATCAACCGTCTTATCCGAGGAGCAATTCAG
ACGGGTCTCTTCGCTTCAATCTTTGCCTTGGCAGACTTGTTCAGTTTCACTTTGGCTGGGACTACTACGCTGTAT
GCCATGTTTGCTTACCCTATCGGTCGCATCTACACCAACACTTTGTTGGATACATTGAATGCTCGTATCGAGCTC
AAGAGGGGAACTGCAGGCACAATTGATGCTGAGAGTGGCAATACGTACAGTCTGCAGAACCACAGCCGTACCCTC
GCTCCAGATGCGTCTACCCATTCGATCCAGGTTCAGAAGGAAACTGTTACGGATGGCGCCAGTCTTGATGCCAAA
TACCCTATCCAGTGA
Gene >AgabiH39|004100
ATGGGTGATTTCGATCTAATTGTTGGTAAGAGGGACTACTACAACTATTAATTCTTGGCTGATCAATTAATTTCA
AGGCCCTTTGCTCATCGGCCTCTTTTGTGAGTATCTTTCGCTCGAATTAAATCGGCTGTTCTCTGATCTATGTCA
GTCAACACATATCTCTATGGTTTGGTCACATACCAATTCTTAGTTTATAAGACGACCAGTATGTTGCTTATTCCG
CTTACGCTTTCATCACCGTCTCACTGACGTGGCTTAGAATTCAATGATCCAACATGGATTAAGTATGCATTCGCG
ATTAGATCAGTCCTTTCACAACTGTTAAACGGGTTTTATTTAGGATCGTAGTGGCTCTGCTCTTTGTGTGCGATA
CGCTGCACAGCGGTGTGTAAGTGTTTGTCGCACTCTTCTGTGCTGTTAGAAGATTCTGATTGACAATAGTGCTGT
CTATGCCGGATGGGAGATGTGGTAAGTGGCGTGGCAATTTATTTTGCGCATGCATTTAATCGCGCGTGCCGTCAG
TGTTACCAATTTCAACCACCCCGAATTACTCATATGTGAGGAATATGCGGTCTCTTTCTTTGATAAGGGCTAATA
TTTGTATCAGTCGTTGGATGGACTATTCCGTTTACTGCCTGTGCCACAGCCGTGGCGGCGTTGCTTACACAAGGT
TTCCTCGCTCACCGGTAAGAACCTTCGGAATAGTTGATTGATCTCAGGGGAAGGCTCATCACGAGCACTACAGTG
TATTGCTTTTGACAAAGAGCAAGGTGATCACAGCAATCATCCTTGTTCTCAGCGTCGTAGGCTTTGTTTTCGGCA
TGTACGCTGGTGTACGCTGCGGAATTATCGATGAGTTCGTTCTAATCCTATTGAAAAAGTTGACGGCTCGTGACA
TCTGGATTATAGTTCCACTAAATTTGCACCTCTGAAGCCGTATGTCGGTTGCTGGCTTGGATTCCAGACTGCCGC
CGATATCTCAATCACTGGTATGTATTTGATCCTAGGCGTCGGCAATATCGTTGAAATGTGTCGCAGCTGTCTTGA
GTTACTCGCTGTCTCGTTCCCGCACTGGTTTCCGCAAGACTGACACTCTCATCAACCGTCTTATCCGAGGAGCAA
TTCAGACGGGTCTCTTCGCTTCAATCTTTGCCTTGGCAGACTTGTTCAGTTTCACTTTGGCTGGGACTACTACGC
TGTATGCCATGTTTGCTTACCCTATCGGTCGCATCTACACCAACGTAAGCTCTCCCCTGATATATTGATACATGG
CTGATCTTTCCCTCTCCCCTCTTCTGAAGACTTTGTTGGATACATTGAATGCTCGTATCGAGCTCAAGAGGGGAA
CTGCAGGCACAATTGATGCTGAGAGTGGCGTACGTCATTTTCGTTGGTCCATGACAAGTTGAAACATTTTAACGC
TCCTTTAGAATACGTACAGTCTGCAGAACCACAGCCGTACCCTCGCTCCAGATGCGTCTACCCATTCGATCCAGG
TTCAGAAGGAAACTGTTACGGATGGCGCCAGTCTTGATGCCAAATACCCTATCCAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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