Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF00078
Short nameRVT_1
Long nameReverse transcriptase (RNA-dependent DNA polymerase)
Proteins with at least one of this domain207
Total domain count207
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
AgabiH39|018450 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.8E-12 150 275
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.1E-32 523 795
AgabiH39|029030 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-32 129 390
PF13456 RVT_3 Reverse transcriptase-like 1.3E-05 627 735
AgabiH39|040000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.1E-08 17 67
PF00075 RNase_H RNase H 8.7E-23 467 603
AgabiH39|081740 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-29 187 346
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.9E-30 410 505
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.4E-32 435 540
AgabiH39|082290 PF13650 Asp_protease_2 Aspartyl protease 7.8E-08 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.7E-09 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-10 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.1E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-38 508 610
AgabiH39|082310 PF08284 RVP_2 Retroviral aspartyl protease 1.4E-05 54 154
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-16 371 532
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-20 598 701
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.7E-28 630 731
AgabiH39|082470 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.7E-22 265 425
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.2E-19 735 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|082500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.7E-22 813 973
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.8E-30 1037 1137
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-33 1063 1168
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.5E-19 1283 1340
AgabiH39|083110 PF12009 Telomerase_RBD Telomerase ribonucleoprotein complex - RNA binding domain 1.1E-42 437 571
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-07 792 874
AgabiH39|084980 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.0E-21 162 321
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.5E-18 385 486
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.5E-26 416 516
AgabiH39|094140 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 4.3E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.9E-32 491 763
AgabiH39|094290 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.4E-19 166 325
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.2E-38 372 468
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.6E-38 400 502
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.5E-19 601 657
AgabiH39|117630 PF13650 Asp_protease_2 Aspartyl protease 5.6E-08 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.1E-09 27 117
PF08284 RVP_2 Retroviral aspartyl protease 5.3E-10 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.9E-19 255 414
AgabiH39|117650 PF00098 zf-CCHC Zinc knuckle 2.0E-05 262 277
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-24 790 951
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-29 1014 1114
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-33 1040 1145
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.5E-20 1259 1317
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.7E-13 1631 1680
AgabiH39|117670 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.7E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-32 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.5E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.0E-06 1010 1046
AgabiH39|117740 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-27 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1010 1059
AgabiH39|117860 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.4E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.4E-32 491 763
AgabiH39|117960 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.0E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-30 491 763
AgabiH39|118340 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.1E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-15 1010 1068
AgabiH39|119520 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-10 489 541
AgabiH39|203500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.9E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|203700 PF13650 Asp_protease_2 Aspartyl protease 1.0E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 4.7E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 7.8E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.1E-39 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.2E-19 724 780
PF00665 rve Integrase core domain 2.7E-12 798 894
AgabiH39|204200 PF08284 RVP_2 Retroviral aspartyl protease 2.2E-04 207 307
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.0E-24 666 826
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-14 890 949
AgabiH39|204300 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-05 108 195
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 830 991
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.4E-30 1054 1154
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 1080 1185
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.6E-20 1299 1357
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.8E-13 1671 1720
AgabiH39|204600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|205000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|208700 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-05 108 195
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 830 991
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1054 1154
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1080 1185
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.6E-20 1299 1357
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1671 1720
AgabiH39|208800 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-05 108 195
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 830 991
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1054 1154
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1080 1185
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.6E-20 1299 1357
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1671 1720
AgabiH39|209100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-08 1 68
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.4E-31 132 232
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-34 158 263
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-20 377 435
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.6E-14 749 798
AgabiH39|209200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|210600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|216300 PF13650 Asp_protease_2 Aspartyl protease 6.0E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.4E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 8.3E-10 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.5E-20 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-36 457 553
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-37 485 587
AgabiH39|217800 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 4.3E-11 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-31 491 763
AgabiH39|219500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.4E-23 2 250
AgabiH39|220000 PF03732 Retrotrans_gag Retrotransposon gag protein 9.4E-08 144 215
PF00098 zf-CCHC Zinc knuckle 4.1E-03 295 309
PF00098 zf-CCHC Zinc knuckle 5.9E-05 323 338
PF13650 Asp_protease_2 Aspartyl protease 2.1E-05 379 469
PF08284 RVP_2 Retroviral aspartyl protease 2.2E-08 388 487
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.8E-19 609 768
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-37 834 930
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.4E-38 862 964
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.9E-19 1078 1134
PF00665 rve Integrase core domain 1.8E-11 1152 1248
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.6E-07 1448 1487
AgabiH39|222300 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 4.7E-11 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-30 491 732
AgabiH39|223000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.3E-32 82 321
AgabiH39|223500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-24 613 774
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.5E-30 837 937
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.5E-33 863 968
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.6E-12 1082 1129
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.9E-13 1413 1462
AgabiH39|223800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.6E-25 210 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.9E-10 434 480
AgabiH39|224000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.4E-17 45 196
AgabiH39|225600 PF08284 RVP_2 Retroviral aspartyl protease 3.8E-08 144 253
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-19 373 532
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-17 596 697
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-21 627 730
AgabiH39|225900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.8E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.5E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.8E-13 1010 1059
AgabiH39|226100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-24 326 487
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.8E-30 550 650
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-33 576 681
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-19 795 853
AgabiH39|228700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.5E-30 654 754
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 680 785
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.8E-20 899 957
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.8E-12 1271 1320
AgabiH39|228800 PF08284 RVP_2 Retroviral aspartyl protease 4.0E-08 526 635
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-19 922 1081
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.4E-17 1145 1246
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.1E-26 1176 1276
AgabiH39|228900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|230300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 850 908
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1222 1271
AgabiH39|230600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 850 908
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1222 1271
AgabiH39|231200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-19 212 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.8E-38 437 533
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-38 465 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.3E-19 681 737
PF00665 rve Integrase core domain 3.6E-12 754 851
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.9E-09 1051 1100
AgabiH39|233300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.7E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.9E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.6E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|240500 PF13650 Asp_protease_2 Aspartyl protease 2.2E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.9E-07 27 117
PF08284 RVP_2 Retroviral aspartyl protease 7.3E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.8E-38 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.2E-31 508 590
AgabiH39|242200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.1E-29 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-32 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.5E-20 919 977
AgabiH39|250400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-32 340 612
AgabiH39|250600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|251400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.4E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.8E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|252400 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.7E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.4E-32 491 763
AgabiH39|252700 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.2E-11 150 275
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.6E-32 545 817
AgabiH39|254400 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 9.5E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.5E-32 491 763
AgabiH39|270900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 254 415
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.1E-30 478 578
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-33 504 609
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.2E-20 723 781
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.9E-14 1095 1144
AgabiH39|271200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.9E-24 312 473
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 536 636
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 562 667
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.4E-12 781 828
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1112 1161
AgabiH39|271400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.6E-34 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.7E-20 842 900
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1214 1263
AgabiH39|282000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|284700 PF13650 Asp_protease_2 Aspartyl protease 4.9E-06 25 115
PF08284 RVP_2 Retroviral aspartyl protease 5.8E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-16 480 530
AgabiH39|286800 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.6E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.9E-30 491 763
AgabiH39|287200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-24 376 537
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-31 600 700
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.2E-35 626 731
AgabiH39|292500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.2E-30 489 586
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.5E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|292700 PF08284 RVP_2 Retroviral aspartyl protease 3.3E-04 376 476
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 835 996
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.3E-31 1059 1159
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1085 1190
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1304 1362
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1676 1725
AgabiH39|299300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.2E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.1E-34 700 805
AgabiH39|299500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|303200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-32 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|303400 PF13650 Asp_protease_2 Aspartyl protease 4.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.1E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 6.2E-10 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.3E-20 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.6E-22 480 547
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.6E-09 508 547
AgabiH39|307500 PF08284 RVP_2 Retroviral aspartyl protease 3.6E-07 195 296
PF13650 Asp_protease_2 Aspartyl protease 1.6E-06 197 280
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.2E-06 197 282
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-23 466 628
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.6E-23 694 797
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.7E-23 724 813
AgabiH39|310100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|310300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|310900 PF13650 Asp_protease_2 Aspartyl protease 3.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 1.5E-07 26 117
PF08284 RVP_2 Retroviral aspartyl protease 1.0E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.6E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.1E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
AgabiH39|316500 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.1E-11 36 168
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.1E-21 453 716
PF00075 RNase_H RNase H 9.0E-08 932 1074
AgabiH39|317700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|317900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.0E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-29 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.4E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|318400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|318600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.8E-20 917 975
AgabiH39|318900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.8E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.9E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1267 1316
AgabiH39|324000 PF13650 Asp_protease_2 Aspartyl protease 5.6E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.9E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 6.7E-10 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.7E-17 256 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.8E-38 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.2E-39 508 610
AgabiH39|327400 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.0E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.3E-32 491 763
AgabiH39|328400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|329000 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 9.5E-13 91 216
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-19 486 724
AgabiH39|329800 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.4E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-32 491 763
AgabiH39|332500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|337900 PF13650 Asp_protease_2 Aspartyl protease 7.0E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 4.3E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.6E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-18 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 5.9E-10 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.6E-09 1094 1143
AgabiH39|338200 PF03732 Retrotrans_gag Retrotransposon gag protein 6.3E-05 108 195
PF00098 zf-CCHC Zinc knuckle 2.1E-05 281 296
PF08284 RVP_2 Retroviral aspartyl protease 1.3E-04 376 476
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 835 996
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.8E-30 1059 1159
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1085 1190
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1304 1362
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1676 1725
AgabiH39|339100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|340900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.6E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.7E-12 734 780
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.6E-14 1065 1114
AgabiH39|341100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|350800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|351000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-31 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.5E-35 700 805
AgabiH39|351500 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 7.5E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.2E-32 491 763
AgabiH39|353500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.1E-22 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.9E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.3E-12 1291 1340
AgabiH39|353700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|354100 PF08284 RVP_2 Retroviral aspartyl protease 4.5E-09 2 98
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-18 220 379
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-37 445 541
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.6E-39 473 575
AgabiH39|355400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|355900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|362400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.5E-44 425 686
PF00075 RNase_H RNase H 5.5E-06 1054 1149
AgabiH39|363700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.8E-19 212 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.9E-38 437 533
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.3E-39 465 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.6E-19 681 737
AgabiH39|363900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-20 275 401
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-08 464 509
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-14 513 568
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-20 682 740
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.5E-14 1054 1103
AgabiH39|364500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.7E-34 24 295
AgabiH39|364800 PF08284 RVP_2 Retroviral aspartyl protease 1.3E-06 26 126
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-28 263 422
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.7E-33 485 580
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-31 510 616
AgabiH39|365300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-25 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.4E-30 674 770
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-19 700 770
AgabiH39|365700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.6E-18 212 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 437 533
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.4E-38 465 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.2E-19 681 737
PF00665 rve Integrase core domain 8.5E-12 755 851
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 5.5E-08 1051 1091
AgabiH39|366200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-18 212 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.8E-38 437 533
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-38 465 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.3E-19 681 737
PF00665 rve Integrase core domain 1.6E-12 754 851
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 8.2E-09 1051 1100
AgabiH39|366400 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 4.0E-11 601 733
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.3E-33 1005 1276
AgabiH39|367300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-18 212 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.8E-38 437 533
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.1E-39 465 567
AgabiH39|375500 PF08284 RVP_2 Retroviral aspartyl protease 3.3E-04 376 476
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 835 996
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1059 1159
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1085 1190
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1304 1362
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1676 1725
AgabiH39|375700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.0E-20 3 125
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-30 188 288
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.8E-34 214 319
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.0E-20 433 491
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.7E-13 805 854
AgabiH39|376500 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 4.4E-12 96 229
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.8E-23 514 779
PF00075 RNase_H RNase H 1.3E-08 992 1135
AgabiH39|388200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|391600 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.0E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-14 491 610
AgabiH39|394800 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.2E-12 150 275
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-31 545 817
AgabiH39|394900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.1E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|397400 PF13650 Asp_protease_2 Aspartyl protease 6.4E-06 33 120
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.3E-07 33 121
PF08284 RVP_2 Retroviral aspartyl protease 1.4E-04 38 139
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-18 259 418
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-37 484 580
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.2E-39 512 614
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.8E-18 728 784
PF00665 rve Integrase core domain 1.7E-12 802 898
AgabiH39|407200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.4E-19 212 371
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.5E-37 437 533
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.0E-38 465 567
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.3E-19 681 737
PF00665 rve Integrase core domain 1.6E-12 754 851
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.9E-09 1051 1100
AgabiH39|415600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|416400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.9E-22 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.7E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.8E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-19 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 3.7E-13 1085 1134
AgabiH39|418200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.9E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1291 1340
AgabiH39|418300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.1E-32 62 324
AgabiH39|418900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.5E-25 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.9E-31 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.3E-34 515 620
AgabiH39|420500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.3E-32 85 357
AgabiH39|421500 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 5.5E-12 16 141
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-32 411 683
AgabiH39|421700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|423200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-14 36 161
AgabiH39|424600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-24 239 400
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.6E-31 463 563
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.5E-34 489 594
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.1E-19 708 766
AgabiH39|425100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-24 240 401
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-30 464 564
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.6E-34 490 595
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.7E-21 709 767
AgabiH39|425500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-24 240 401
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-30 464 564
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 6.6E-34 490 595
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.7E-21 709 767
AgabiH39|431100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.1E-19 78 237
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 303 399
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.5E-38 331 433
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.3E-19 547 603
PF00665 rve Integrase core domain 8.5E-12 621 717
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.6E-09 917 966
AgabiH39|431500 PF08284 RVP_2 Retroviral aspartyl protease 5.4E-08 912 1021
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.1E-19 1308 1467
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-17 1531 1632
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-26 1562 1662
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.6E-16 1865 1920
AgabiH39|440500 PF08284 RVP_2 Retroviral aspartyl protease 1.4E-04 110 210
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.8E-23 569 730
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-30 793 893
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.5E-34 819 924
AgabiH39|442600 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.3E-08 26 117
PF08284 RVP_2 Retroviral aspartyl protease 2.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 8.9E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-37 441 537
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.0E-38 469 571
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-19 685 741
PF00665 rve Integrase core domain 1.1E-10 759 855
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.5E-07 1055 1095
AgabiH39|443400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.1E-34 700 805
AgabiH39|443800 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.3E-12 2 134
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.0E-26 406 636
AgabiH39|444200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.2E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|444800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-17 672 740
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-06 698 740
AgabiH39|458400 PF13650 Asp_protease_2 Aspartyl protease 1.4E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.8E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 2.5E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.8E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.2E-18 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.0E-10 1094 1143
AgabiH39|463000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 9.8E-31 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.8E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.3E-20 919 977
AgabiH39|463500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|463900 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 6.1E-11 96 218
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-30 488 760
AgabiH39|464500 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.8E-11 122 247
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.4E-32 517 789
AgabiH39|465100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-32 142 414
AgabiH39|465600 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.2E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 3.7E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.1E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.3E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.9E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 3.1E-10 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
AgabiH39|467600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.1E-43 133 352
AgabiH39|468900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.1E-19 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|471600 PF00098 zf-CCHC Zinc knuckle 4.1E-05 65 80
PF13650 Asp_protease_2 Aspartyl protease 9.6E-07 121 211
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.5E-08 123 213
PF08284 RVP_2 Retroviral aspartyl protease 1.5E-09 130 229
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-19 351 510
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-16 576 627
AgabiH39|471800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|475300 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.5E-12 2 134
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.3E-33 406 677
AgabiH39|475500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.6E-23 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|475700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-23 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.9E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.5E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.8E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 4.8E-13 1106 1155
AgabiH39|476100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|476800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-17 78 229
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.2E-31 303 384
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.3E-17 331 385
AgabiH39|478900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-22 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|479400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.0E-22 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|482900 PF13650 Asp_protease_2 Aspartyl protease 2.6E-06 31 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.3E-08 32 117
PF08284 RVP_2 Retroviral aspartyl protease 5.8E-10 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-35 480 571
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-22 508 571
AgabiH39|483400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-24 381 542
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.4E-30 605 705
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.6E-33 631 736
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.4E-19 850 908
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.1E-13 1222 1271
AgabiH39|484000 PF13650 Asp_protease_2 Aspartyl protease 7.8E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.3E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.1E-09 34 132
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.7E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.3E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.0E-19 724 780
PF00665 rve Integrase core domain 6.9E-12 797 894
AgabiH39|484500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 9.5E-25 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 8.0E-31 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.8E-28 515 609
AgabiH39|484800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|488100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.7E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.5E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.1E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 6.6E-14 1291 1340
AgabiH39|490700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.6E-24 448 608
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.6E-34 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|491000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.9E-24 450 610
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 9.0E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 7.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|491200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|499700 PF00098 zf-CCHC Zinc knuckle 2.1E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 850 1011
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.9E-30 1074 1174
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1100 1205
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1319 1377
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.6E-13 1691 1740
AgabiH39|501300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.8E-28 10 169
AgabiH39|501700 PF03732 Retrotrans_gag Retrotransposon gag protein 4.0E-05 108 195
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.7E-24 821 982
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.0E-30 1045 1145
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.0E-33 1071 1176
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.7E-20 1290 1348
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1662 1711
AgabiH39|502500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.9E-31 86 354
AgabiH39|502600 PF00098 zf-CCHC Zinc knuckle 2.1E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 850 1011
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.9E-30 1074 1174
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1100 1205
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1319 1377
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.6E-13 1691 1740
AgabiH39|503700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.2E-32 205 365
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.4E-30 412 507
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-28 437 528
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.4E-17 623 679
AgabiH39|509500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 241 402
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.7E-30 465 565
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 491 596
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.4E-20 710 768
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 9.7E-14 1082 1131
AgabiH39|509600 PF00098 zf-CCHC Zinc knuckle 2.0E-05 261 276
PF08284 RVP_2 Retroviral aspartyl protease 2.2E-04 330 430
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-24 789 950
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-30 1013 1113
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 4.7E-34 1039 1144
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.5E-20 1258 1316
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1630 1679
AgabiH39|509700 PF08284 RVP_2 Retroviral aspartyl protease 1.2E-10 1249 1348
PF13650 Asp_protease_2 Aspartyl protease 3.8E-07 1250 1337
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.8E-08 1250 1338
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-17 1471 1629
AgabiH39|510500 PF03732 Retrotrans_gag Retrotransposon gag protein 2.3E-05 108 195
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 830 991
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.4E-30 1054 1154
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-33 1080 1185
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.6E-20 1299 1357
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1671 1720
AgabiH39|510800 PF00098 zf-CCHC Zinc knuckle 1.6E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 848 1009
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 1072 1172
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-32 1098 1200
AgabiH39|513700 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|514000 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 5.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|514500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.4E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.7E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|514800 PF00098 zf-CCHC Zinc knuckle 2.1E-05 281 296
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 833 994
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.3E-30 1057 1157
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.3E-33 1083 1188
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1302 1360
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1674 1723
AgabiH39|518100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 919 977
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1291 1340
AgabiH39|518400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.8E-24 833 994
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.5E-30 1057 1157
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.8E-33 1083 1188
PF17921 Integrase_H2C2 Integrase zinc binding domain 6.7E-20 1302 1360
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-13 1674 1723
AgabiH39|520600 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-28 201 360
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-34 423 518
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 5.9E-33 448 554
PF17921 Integrase_H2C2 Integrase zinc binding domain 1.3E-19 640 696
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.5E-15 1010 1068
AgabiH39|520900 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 5.6E-12 2 134
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.6E-33 406 677
AgabiH39|521900 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.7E-11 150 275
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 7.6E-32 545 817
AgabiH39|524200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-32 257 529
AgabiH39|524900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.1E-32 340 579
AgabiH39|526100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.2E-31 51 323
AgabiH39|527400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|532300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 2.1E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|533800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.0E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.4E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|534100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.1E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 3.4E-20 917 975
AgabiH39|535200 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.5E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.2E-30 489 589
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 7.9E-34 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 9.2E-19 734 789
AgabiH39|535400 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 3.5E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 3.6E-30 672 772
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.7E-33 698 803
PF17921 Integrase_H2C2 Integrase zinc binding domain 5.0E-20 917 975
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.2E-13 1289 1338
AgabiH39|539900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-42 599 823
PF00075 RNase_H RNase H 2.4E-06 1220 1322
AgabiH39|541900 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.3E-19 78 237
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.1E-37 303 399
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.7E-39 331 433
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.9E-19 547 603
PF00665 rve Integrase core domain 7.0E-12 620 717
AgabiH39|542500 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.3E-24 448 609
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.8E-17 672 740
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 8.1E-07 698 740
AgabiH39|543800 PF13650 Asp_protease_2 Aspartyl protease 1.3E-06 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.2E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 4.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.2E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 1.6E-37 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.2E-38 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.0E-19 724 780
PF00665 rve Integrase core domain 1.2E-11 798 894
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.0E-09 1094 1143
AgabiH39|545400 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.6E-11 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 1.4E-31 491 763
AgabiH39|546800 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.8E-24 265 426
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 4.2E-30 489 586
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 1.8E-33 515 620
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 734 792
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 1.0E-13 1106 1155
AgabiH39|547300 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 2.7E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.4E-32 491 763
AgabiH39|547500 PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.9E-12 96 221
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.6E-32 491 763
AgabiH39|548800 PF13650 Asp_protease_2 Aspartyl protease 8.1E-07 25 115
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 5.2E-08 27 117
PF08284 RVP_2 Retroviral aspartyl protease 1.4E-09 34 133
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 4.3E-19 255 414
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 7.1E-36 480 576
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 3.1E-37 508 610
PF17921 Integrase_H2C2 Integrase zinc binding domain 8.4E-19 725 780
AgabiH39|549100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.7E-24 450 611
PF17919 RT_RNaseH_2 RNase H-like domain found in reverse transcriptase 6.3E-31 674 774
PF17917 RT_RNaseH RNase H-like domain found in reverse transcriptase 2.8E-34 700 805
PF17921 Integrase_H2C2 Integrase zinc binding domain 4.3E-20 919 977
AgabiH39|549300 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 5.0E-33 131 403
AgabiH39|550100 PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 2.0E-43 682 926
PF00075 RNase_H RNase H 2.3E-07 1305 1406

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