Fungal Genomics

General Properties

Protein ID	Agabi119p4|790200
Gene name
Location	scaffold_13:1254486..1255908
Strand	-
Gene length (bp)	1422
Transcript length (bp)	1422
Coding sequence length (bp)	1422
Protein length (aa)	474

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.4E-07	61	118
PF00646	F-box	F-box domain	1.2E-03	62	107

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	9326
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|038290
Agaricus bisporus var bisporus H97	AgabiH97|038290
Agaricus bisporus var burnettii H119p4	Agabi119p4|790200 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|790200 MESAKANPHCDYRPQDDYPYTLTNLVQISEQVNSLNNHIRDLFKIRSNLLHRSNQLRSLASTLPPEILSNIFRKL VDPDFALGEPSAPFRLRQSFTLSSVSTHWRNAALGTPQLWEDMHCIVPNNNQSVDNLISLLQHCSSCAHTLNILL SLPSFENDREVLHTLTQELFSSEIKEKVRSLTLCWPPAHWLSMIFRLPILRSLFILGYVASDRDNFRLYTLATVP TSLRSLHVEDVPMFDTPILRLCQNVEFCKYRPGSPIVPVSYSEPLILGKLERLIMPAGHGLQTVTSAGNLLMPSL KHLELEHRGFHDLDFYPDIIIHFCRQVSKTLLGLTIRCSGPQWSVDALRLLFKSLPHLREFHAEGWIVAPINVIQ ALISYKDSNREIDCLPRLTTLSLHEEPNDGGSLPSRSYFDLVLELLKCRRTNEGPLFHVDIAGRSLIGLGPELEE ELKSVVENYQILVTNRKQKLPWL*
Coding	>Agabi119p4|790200 ATGGAGTCTGCAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCTATACGCTAACAAATCTC GTGCAAATCAGCGAGCAAGTCAACAGCCTCAACAACCATATTCGCGACTTGTTCAAAATACGCAGCAATTTGCTT CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTGAAATCTTGTCAAACATATTTCGCAAGTTG GTCGATCCTGACTTTGCACTAGGTGAACCCAGTGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGCTCGGTA TCGACTCACTGGCGCAATGCAGCTCTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTCCCAATAAC AATCAGTCGGTTGATAATCTCATTTCTTTGCTTCAACACTGCTCTTCGTGCGCTCATACTCTGAATATTTTACTG TCGCTCCCGTCTTTCGAGAATGACAGGGAGGTCCTGCACACACTTACTCAAGAACTTTTCTCAAGTGAAATCAAG GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTTTCGGTTGCCCATCCTT CGTTCTCTGTTCATTCTCGGCTATGTCGCCTCGGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGCCAAAACGTC GAATTTTGCAAATATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCCGAACCCCTTATCCTTGGAAAGCTC GAACGCTTGATTATGCCAGCTGGGCACGGTCTTCAGACTGTAACATCTGCGGGAAACTTGCTGATGCCCTCACTC AAGCATTTGGAATTAGAGCATCGGGGTTTTCATGACCTCGACTTTTACCCGGACATCATCATCCACTTCTGTCGC CAAGTATCTAAAACACTTCTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGACGCACTACGACTA TTATTTAAATCCCTCCCACATCTTCGAGAGTTTCACGCTGAGGGCTGGATAGTTGCTCCCATCAATGTCATTCAA GCGCTCATATCTTACAAGGATAGCAACCGGGAGATTGATTGCTTGCCGCGCCTAACAACTTTGTCGCTGCATGAA GAACCTAATGACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGGTCCTGGAGTTATTGAAGTGTAGGAGG ACTAATGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCCTGATAGGTCTGGGCCCGGAATTGGAGGAA GAGTTGAAATCTGTCGTTGAGAATTATCAGATCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA
Transcript	>Agabi119p4|790200 ATGGAGTCTGCAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCTATACGCTAACAAATCTC GTGCAAATCAGCGAGCAAGTCAACAGCCTCAACAACCATATTCGCGACTTGTTCAAAATACGCAGCAATTTGCTT CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTGAAATCTTGTCAAACATATTTCGCAAGTTG GTCGATCCTGACTTTGCACTAGGTGAACCCAGTGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGCTCGGTA TCGACTCACTGGCGCAATGCAGCTCTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTCCCAATAAC AATCAGTCGGTTGATAATCTCATTTCTTTGCTTCAACACTGCTCTTCGTGCGCTCATACTCTGAATATTTTACTG TCGCTCCCGTCTTTCGAGAATGACAGGGAGGTCCTGCACACACTTACTCAAGAACTTTTCTCAAGTGAAATCAAG GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTTTCGGTTGCCCATCCTT CGTTCTCTGTTCATTCTCGGCTATGTCGCCTCGGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGCCAAAACGTC GAATTTTGCAAATATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCCGAACCCCTTATCCTTGGAAAGCTC GAACGCTTGATTATGCCAGCTGGGCACGGTCTTCAGACTGTAACATCTGCGGGAAACTTGCTGATGCCCTCACTC AAGCATTTGGAATTAGAGCATCGGGGTTTTCATGACCTCGACTTTTACCCGGACATCATCATCCACTTCTGTCGC CAAGTATCTAAAACACTTCTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGACGCACTACGACTA TTATTTAAATCCCTCCCACATCTTCGAGAGTTTCACGCTGAGGGCTGGATAGTTGCTCCCATCAATGTCATTCAA GCGCTCATATCTTACAAGGATAGCAACCGGGAGATTGATTGCTTGCCGCGCCTAACAACTTTGTCGCTGCATGAA GAACCTAATGACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGGTCCTGGAGTTATTGAAGTGTAGGAGG ACTAATGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCCTGATAGGTCTGGGCCCGGAATTGGAGGAA GAGTTGAAATCTGTCGTTGAGAATTATCAGATCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA
Gene	>Agabi119p4|790200 ATGGAGTCTGCAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCTATACGCTAACAAATCTC GTGCAAATCAGCGAGCAAGTCAACAGCCTCAACAACCATATTCGCGACTTGTTCAAAATACGCAGCAATTTGCTT CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTGAAATCTTGTCAAACATATTTCGCAAGTTG GTCGATCCTGACTTTGCACTAGGTGAACCCAGTGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGCTCGGTA TCGACTCACTGGCGCAATGCAGCTCTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTCCCAATAAC AATCAGTCGGTTGATAATCTCATTTCTTTGCTTCAACACTGCTCTTCGTGCGCTCATACTCTGAATATTTTACTG TCGCTCCCGTCTTTCGAGAATGACAGGGAGGTCCTGCACACACTTACTCAAGAACTTTTCTCAAGTGAAATCAAG GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTTTCGGTTGCCCATCCTT CGTTCTCTGTTCATTCTCGGCTATGTCGCCTCGGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGCCAAAACGTC GAATTTTGCAAATATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCCGAACCCCTTATCCTTGGAAAGCTC GAACGCTTGATTATGCCAGCTGGGCACGGTCTTCAGACTGTAACATCTGCGGGAAACTTGCTGATGCCCTCACTC AAGCATTTGGAATTAGAGCATCGGGGTTTTCATGACCTCGACTTTTACCCGGACATCATCATCCACTTCTGTCGC CAAGTATCTAAAACACTTCTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGACGCACTACGACTA TTATTTAAATCCCTCCCACATCTTCGAGAGTTTCACGCTGAGGGCTGGATAGTTGCTCCCATCAATGTCATTCAA GCGCTCATATCTTACAAGGATAGCAACCGGGAGATTGATTGCTTGCCGCGCCTAACAACTTTGTCGCTGCATGAA GAACCTAATGACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGGTCCTGGAGTTATTGAAGTGTAGGAGG ACTAATGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCCTGATAGGTCTGGGCCCGGAATTGGAGGAA GAGTTGAAATCTGTCGTTGAGAATTATCAGATCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA