Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|789800
Gene name
Locationscaffold_13:1230085..1231571
Strand-
Gene length (bp)1486
Transcript length (bp)1257
Coding sequence length (bp)1257
Protein length (aa) 419

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12430 ABA_GPCR Abscisic acid G-protein coupled receptor 7.4E-32 226 413
PF12537 GPHR_N The Golgi pH Regulator (GPHR) Family N-terminal 1.1E-15 103 170

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B2ZXD5|GPHR_CRIGR Golgi pH regulator OS=Cricetulus griseus GN=GPR89 PE=2 SV=1 1 403 1.0E-26
sp|Q8BS95|GPHR_MOUSE Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=1 SV=2 1 403 1.0E-26
sp|B5X1G3|GPHR_SALSA Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1 1 403 2.0E-26
sp|Q5F448|GPHR_CHICK Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1 1 403 5.0E-26
sp|P0CG08|GPHRB_HUMAN Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1 1 403 5.0E-26
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Swissprot ID Swissprot Description Start End E-value
sp|B2ZXD5|GPHR_CRIGR Golgi pH regulator OS=Cricetulus griseus GN=GPR89 PE=2 SV=1 1 403 1.0E-26
sp|Q8BS95|GPHR_MOUSE Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=1 SV=2 1 403 1.0E-26
sp|B5X1G3|GPHR_SALSA Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1 1 403 2.0E-26
sp|Q5F448|GPHR_CHICK Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1 1 403 5.0E-26
sp|P0CG08|GPHRB_HUMAN Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1 1 403 5.0E-26
sp|B7ZAQ6|GPHRA_HUMAN Golgi pH regulator A OS=Homo sapiens GN=GPR89A PE=1 SV=2 1 403 5.0E-26
sp|Q5BIM9|GPHR_BOVIN Golgi pH regulator OS=Bos taurus GN=GPR89A PE=2 SV=2 1 403 9.0E-26
sp|Q6DDW6|GPHR_XENLA Golgi pH regulator OS=Xenopus laevis GN=gpr89-b PE=2 SV=1 1 403 1.0E-19
sp|Q0WQG8|GTG2_ARATH GPCR-type G protein 2 OS=Arabidopsis thaliana GN=GTG2 PE=1 SV=2 1 366 6.0E-14
sp|Q7X7S8|COLD1_ORYSJ GPCR-type G protein COLD1 OS=Oryza sativa subsp. japonica GN=COLD1 PE=1 SV=2 107 366 4.0E-12
sp|A2XX57|COLD1_ORYSI GPCR-type G protein COLD1 OS=Oryza sativa subsp. indica GN=COLD1 PE=3 SV=1 107 366 1.0E-11
sp|Q9XIP7|GTG1_ARATH GPCR-type G protein 1 OS=Arabidopsis thaliana GN=GTG1 PE=1 SV=1 1 366 9.0E-11
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 35 57 22
3 72 94 22
4 106 128 22
5 238 260 22
6 273 295 22
7 310 332 22
8 339 361 22
9 389 411 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|789800
MFTWTFTESSMLFLLLVFQAANIASSTSRTAHFQFSLYALLVIHILLIPHSITLLIVAPPSGLSSLLRSPRTLLF
SFIPVILSLILLSYIPFYTDAASPPNLLGRTLSRLIVLGTVILGLLSGFGAVTRAWDFLPSSTHYDGVPTEEDIR
ITETSLQSTLNDLQKKRNELVAHTNGDSSSSWMKRVGDTLRGGNDLTLEIRGLETLYDTLTLTLHSQRSKLASSK
ASHTFLGRIKSVIGRLFAGYCVFRTFTAAYNTIFLRQRSHQTTTYPDIVTNILIWLLVPNDSTTTTTTTLLTPES
ISSLTNHISLLLIGLIILSSIGLVMKNVNRALKVTSKNLGTSLLLLVLSYLMGIYLLSTLIQLRSSFPPTSPNQT
TTINLFTLIPPYELFASLFDLTFLVGVLGWGVVKWVGDRLSMV*
Coding >Agabi119p4|789800
ATGTTTACTTGGACATTCACCGAAAGCTCGATGCTGTTTCTCTTGCTCGTCTTCCAAGCCGCCAACATCGCTTCC
TCCACCTCCAGGACAGCGCATTTCCAATTCTCCCTCTACGCTCTCCTCGTCATCCACATCCTTCTCATCCCACAC
TCCATCACTCTCCTCATAGTCGCTCCTCCCTCAGGTCTATCCTCTCTCCTCCGTTCTCCACGAACCCTCTTATTC
TCATTCATACCCGTCATTCTCTCTCTCATCCTCCTCTCCTACATCCCTTTCTACACCGACGCTGCATCTCCCCCA
AATCTACTCGGTCGTACCCTTTCACGACTCATCGTTCTCGGAACCGTCATCTTGGGTCTTTTATCTGGCTTCGGA
GCCGTCACTCGTGCATGGGATTTTCTTCCTTCTTCAACACACTATGATGGTGTACCTACAGAAGAGGATATACGA
ATCACAGAAACGAGTCTTCAAAGTACACTAAACGATTTACAAAAAAAACGTAACGAGTTGGTGGCACACACCAAT
GGGGATTCGTCATCCAGTTGGATGAAGAGAGTAGGAGATACTCTACGTGGTGGCAATGACCTTACACTTGAGATT
AGAGGACTTGAAACACTTTATGATACTTTAACTCTCACTCTTCACTCTCAACGTTCAAAACTCGCTTCATCAAAA
GCTTCCCATACATTCCTCGGTCGAATAAAATCAGTCATAGGAAGATTATTCGCCGGATACTGCGTTTTTCGAACT
TTTACCGCCGCGTATAATACGATATTTCTTCGTCAACGATCACACCAAACGACGACTTATCCAGATATCGTGACT
AACATTCTCATCTGGTTACTCGTCCCAAACGATTCAACAACAACAACAACAACAACTTTGTTAACGCCAGAATCG
ATATCATCACTGACCAATCATATTTCTTTACTTCTCATCGGGTTGATTATTTTATCCAGTATAGGATTAGTTATG
AAAAACGTTAACCGCGCATTGAAAGTGACATCAAAAAATTTGGGAACATCACTTTTACTTCTCGTCCTCTCGTAC
CTCATGGGGATATACCTATTATCAACTCTCATCCAACTCCGTTCTTCGTTCCCACCTACATCTCCAAATCAAACA
ACGACGATTAATTTGTTTACGTTGATCCCTCCATACGAGTTGTTTGCTTCTTTATTTGATTTGACGTTTTTGGTT
GGGGTGTTGGGGTGGGGTGTTGTGAAGTGGGTTGGGGATAGACTTTCGATGGTTTGA
Transcript >Agabi119p4|789800
ATGTTTACTTGGACATTCACCGAAAGCTCGATGCTGTTTCTCTTGCTCGTCTTCCAAGCCGCCAACATCGCTTCC
TCCACCTCCAGGACAGCGCATTTCCAATTCTCCCTCTACGCTCTCCTCGTCATCCACATCCTTCTCATCCCACAC
TCCATCACTCTCCTCATAGTCGCTCCTCCCTCAGGTCTATCCTCTCTCCTCCGTTCTCCACGAACCCTCTTATTC
TCATTCATACCCGTCATTCTCTCTCTCATCCTCCTCTCCTACATCCCTTTCTACACCGACGCTGCATCTCCCCCA
AATCTACTCGGTCGTACCCTTTCACGACTCATCGTTCTCGGAACCGTCATCTTGGGTCTTTTATCTGGCTTCGGA
GCCGTCACTCGTGCATGGGATTTTCTTCCTTCTTCAACACACTATGATGGTGTACCTACAGAAGAGGATATACGA
ATCACAGAAACGAGTCTTCAAAGTACACTAAACGATTTACAAAAAAAACGTAACGAGTTGGTGGCACACACCAAT
GGGGATTCGTCATCCAGTTGGATGAAGAGAGTAGGAGATACTCTACGTGGTGGCAATGACCTTACACTTGAGATT
AGAGGACTTGAAACACTTTATGATACTTTAACTCTCACTCTTCACTCTCAACGTTCAAAACTCGCTTCATCAAAA
GCTTCCCATACATTCCTCGGTCGAATAAAATCAGTCATAGGAAGATTATTCGCCGGATACTGCGTTTTTCGAACT
TTTACCGCCGCGTATAATACGATATTTCTTCGTCAACGATCACACCAAACGACGACTTATCCAGATATCGTGACT
AACATTCTCATCTGGTTACTCGTCCCAAACGATTCAACAACAACAACAACAACAACTTTGTTAACGCCAGAATCG
ATATCATCACTGACCAATCATATTTCTTTACTTCTCATCGGGTTGATTATTTTATCCAGTATAGGATTAGTTATG
AAAAACGTTAACCGCGCATTGAAAGTGACATCAAAAAATTTGGGAACATCACTTTTACTTCTCGTCCTCTCGTAC
CTCATGGGGATATACCTATTATCAACTCTCATCCAACTCCGTTCTTCGTTCCCACCTACATCTCCAAATCAAACA
ACGACGATTAATTTGTTTACGTTGATCCCTCCATACGAGTTGTTTGCTTCTTTATTTGATTTGACGTTTTTGGTT
GGGGTGTTGGGGTGGGGTGTTGTGAAGTGGGTTGGGGATAGACTTTCGATGGTTTGA
Gene >Agabi119p4|789800
ATGTTTACTTGGACATTCACCGAAAGCTCGATGCTGTTTCTCTTGCTCGTCTTCCAAGCCGCCAACATCGCTTCC
TCCACCTCCAGGACAGCGCATTTCCAATTCTCCCTCTACGCTCTCCTCGTCATCCACATCCTTCTCATCCCACAC
TCCATCACTCTCCTCATAGTCGCTCCTCCCTCAGGTCTATCCTCTCTCCTCCGTTCTCCACGAACCCTCTTATTC
TCATTCATACCCGTCATTCTCTCTCTCATCCTCCTCTCCTACATCCCTTTCTACACCGACGCTGCATCTCCCCCA
AATCTACTCGGTCGTACCCTTTCACGACTCATCGTTCTCGGAACCGTCATCTTGGGTCTTTTATCTGGCTTCGGA
GCCGTCACTCGTGCATGGGATTTTCTTCCTTCTTCAACACACTATGATGGTGTACCTACAGAAGAGGATATACGA
ATCACAGAAACGAGTCTTCAAAGTACACTAAACGATTTACAAAAAAAACGTAACGAGTTGGTGGCACACACCAAT
GGGGATTCGTCATCCAGTTGGATGAAGAGAGTAGGAGATACTCTACGTGGTGGCAATGACCGTGCGTCTCAGCGT
TGTTTAATTCTTCTTTTGTATGCTAAAAAAAAACTTTTTTTTAGTTACACTTGAGATTAGAGGACTTGAAACACT
TTATGATACTTTAACTCTCACTCTTCACTCTCAACGTTCAAAACTCGCTTCATCAAAAGCTTCCCATACATTCCT
CGGTCGAATAAAATCAGTCATAGGAAGATTATTCGCCGGATACTGCGTTTTTCGAACTTTTACCGTACGTGGGTC
ACAACCTAAAAAAAATAGTTGGATGTTGTTAACAGATACTAAAAACTAGGCCGCGTATAATACGATATTTCTTCG
TCAACGATCACACCAAACGACGACTTATCCAGATATCGTGACTAACATTCTCATCTGGTTACTCGTCCCAAACGA
TTCAACAACAACAACAACAACAACTTTGTTAACGCCAGAATCGATATCATCACTGACCAATCATATTTCTTTACT
TCTCATCGGGTTGATTATTTTATCCAGTATAGGATTAGTTATGAAAAACGTTAACCGCGTATGTACCCCCAACAT
CAAACATTTTTCTTTTGTTTTAACCAATTTGAATTTTTTAGGCATTGAAAGTGACATCAAAAAATTTGGGAACAT
CACTTTTACTTCTCGTCCTCTCGTACCTCATGGTTCGTTCTTCTCTCTCTCTCTCTCTCTCTCTCATCTTCATAT
ACCATCTCAGGGGATATACCTATTATCAACTCTCATCCAACTCCGTTCTTCGTTCCCACCTACATCTCCAAATCA
AACAACGACGATTAATTTGTTTACGTTGATCCCTCCATACGAGTTGTTTGCTTCTTTATTTGATTTGACGTTTTT
GGTTGGGGTGTTGGGGTGGGGTGTTGTGAAGTGGGTTGGGGATAGACTTTCGATGGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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