Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|785250
Gene name
Locationscaffold_13:754678..756131
Strand-
Gene length (bp)1453
Transcript length (bp)498
Coding sequence length (bp)498
Protein length (aa) 166

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17921 Integrase_H2C2 Integrase zinc binding domain 2.0E-12 103 149

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|785250
MGKADALSRRPDFEQGSKDDNKDQTLLKPEYFAIRAMEEGHMLINAEEEKILEEIRKSEAREDDVVKAVEEMKQA
KVKSLRGDKWKLEEGLVLKKGKVYVPKDETLRTKIIRLHHNTPIAGHRGQWKTVEMVTRNYWWPGVTKQVQNKID
RVVLNLLKLQLVEVL*
Coding >Agabi119p4|785250
ATGGGAAAGGCAGATGCATTAAGCAGAAGACCTGACTTCGAACAAGGATCAAAGGATGATAACAAGGATCAAACC
TTGTTGAAACCAGAATATTTTGCAATTCGAGCAATGGAAGAGGGTCATATGTTAATCAATGCCGAGGAGGAGAAG
ATATTAGAGGAAATCAGAAAATCAGAAGCAAGAGAAGATGACGTGGTGAAAGCGGTAGAAGAGATGAAGCAAGCA
AAAGTGAAGTCGTTGAGGGGAGACAAGTGGAAGTTGGAAGAAGGATTAGTGCTGAAGAAAGGCAAAGTCTATGTG
CCGAAGGATGAGACGTTAAGGACAAAAATCATTCGACTACATCACAATACCCCCATTGCCGGACACAGAGGACAA
TGGAAGACAGTAGAAATGGTGACGCGCAATTACTGGTGGCCAGGCGTCACTAAGCAAGTCCAGAACAAGATTGAC
CGGGTGGTCCTGAACTTGCTCAAGCTTCAACTGGTCGAAGTGCTGTGA
Transcript >Agabi119p4|785250
ATGGGAAAGGCAGATGCATTAAGCAGAAGACCTGACTTCGAACAAGGATCAAAGGATGATAACAAGGATCAAACC
TTGTTGAAACCAGAATATTTTGCAATTCGAGCAATGGAAGAGGGTCATATGTTAATCAATGCCGAGGAGGAGAAG
ATATTAGAGGAAATCAGAAAATCAGAAGCAAGAGAAGATGACGTGGTGAAAGCGGTAGAAGAGATGAAGCAAGCA
AAAGTGAAGTCGTTGAGGGGAGACAAGTGGAAGTTGGAAGAAGGATTAGTGCTGAAGAAAGGCAAAGTCTATGTG
CCGAAGGATGAGACGTTAAGGACAAAAATCATTCGACTACATCACAATACCCCCATTGCCGGACACAGAGGACAA
TGGAAGACAGTAGAAATGGTGACGCGCAATTACTGGTGGCCAGGCGTCACTAAGCAAGTCCAGAACAAGATTGAC
CGGGTGGTCCTGAACTTGCTCAAGCTTCAACTGGTCGAAGTGCTGTGA
Gene >Agabi119p4|785250
ATGGGAAAGGCAGATGCATTAAGCAGAAGACCTGACTTCGAACAAGGATCAAAGGATGATAACAAGGATCAAACC
TTGTTGAAACCAGAATATTTTGCAATTCGAGCAATGGAAGAGGGTCATATGTTAATCAATGCCGAGGAGGAGAAG
ATATTAGAGGAAATCAGAAAATCAGAAGCAAGAGAAGATGACGTGGTGAAAGCGGTAGAAGAGATGAAGCAAGCA
AAAGTGAAGTCGTTGAGGGGAGACAAGTGGAAGTTGGAAGAAGGATTAGTGCTGAAGAAAGGCAAAGTCTATGTG
CCGAAGGATGAGACGTTAAGGACAAAAATCATTCGACTACATCACAATACCCCCATTGCCGGACACAGAGGACAA
TGGAAGACAGTAGAAATGGTGACGCGCAATTACTGGTGGCCAGGCGTCACTAAGCAAGTCCAGAAGTACGTGGAG
GGATGCGATCAATGCCAACGAAACAAGAATTGACCAACACCACCAGCAGGAAAATTAATGCCAAACCCTATTTCC
ACAAAACCATGGGCCGACGTATCTGTTGACTTCATAGTAAAATTGCCAGAATCCCAGGGAATGGACTCAATTTTA
GTGGTGTGCGATTGATTTAGTAAAATGGCTCATTTCATCCTGACTACGGAAACAACATCAGCACTAGGACTGGCC
AAGCTGTTTAGGGACCACGTATGGAAGTTGCATGGATTGCCAGAAACAGTAATCTCAGATAGGGGACCGCAGTTT
GCTGCAGACTTTACAAAGGAATTGAATAAGATGTTGGGAATCGACACTAGGTTGTCTACGGCTTTTCACCCACAG
ACTGATGGCCAGACAGAGTGAACCAATCAAGAGCTAGAACAATATCTCCAATCATTTGTTGATCATAAACAAACT
GATTGGCCTGATTGGTTAGCAACGGCGGAGTTTTCCTATAACAATAAAGTACAATCATCAACAAAGGAAACTCCA
TTTATGGTCAATGTGGGAAGACATCCGAGAACTGGCTTTGATCTCCGACGACAAGGCAATCACCCGGCAGCAGTA
GAATTTGCGGACCGCATGAAACTTCAACACGAAGAAACTCAAGCGGCCCTAAAAAGGGCACAAGATGACATGCGG
AGGTATGCAGATAGAGGCAGAGGGGAAGCGGTGAAATACAAAGTAGGAGATAAAGTTCTACTAGCTACCCGGGAC
CTTCAAATCCAGGGACGACCTACCCGGAAACTTACGGAGAAATTCATCGGACCGTTGTAGAGGCAGAAATGGAAT
ACGAAGCGTAGCTATGAGATAACCACACCAAGCTTCCAATACTGTGACTCGAAATGCGAGTTTGTGGGAGATAAA
ACAATGTTAAAGTCTCGAAAGTATATATATAAATTCAATTAATAGCAAGATTGACCGGGTGGTCCTGAACTTGCT
CAAGCTTCAACTGGTCGAAGTGCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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