Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|785250
Gene name
Location	scaffold_13:754678..756131
Strand	-
Gene length (bp)	1453
Transcript length (bp)	498
Coding sequence length (bp)	498
Protein length (aa)	166

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF17921	Integrase_H2C2	Integrase zinc binding domain	2.0E-12	103	149

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|785250 MGKADALSRRPDFEQGSKDDNKDQTLLKPEYFAIRAMEEGHMLINAEEEKILEEIRKSEAREDDVVKAVEEMKQA KVKSLRGDKWKLEEGLVLKKGKVYVPKDETLRTKIIRLHHNTPIAGHRGQWKTVEMVTRNYWWPGVTKQVQNKID RVVLNLLKLQLVEVL*
Coding	>Agabi119p4\|785250 ATGGGAAAGGCAGATGCATTAAGCAGAAGACCTGACTTCGAACAAGGATCAAAGGATGATAACAAGGATCAAACC TTGTTGAAACCAGAATATTTTGCAATTCGAGCAATGGAAGAGGGTCATATGTTAATCAATGCCGAGGAGGAGAAG ATATTAGAGGAAATCAGAAAATCAGAAGCAAGAGAAGATGACGTGGTGAAAGCGGTAGAAGAGATGAAGCAAGCA AAAGTGAAGTCGTTGAGGGGAGACAAGTGGAAGTTGGAAGAAGGATTAGTGCTGAAGAAAGGCAAAGTCTATGTG CCGAAGGATGAGACGTTAAGGACAAAAATCATTCGACTACATCACAATACCCCCATTGCCGGACACAGAGGACAA TGGAAGACAGTAGAAATGGTGACGCGCAATTACTGGTGGCCAGGCGTCACTAAGCAAGTCCAGAACAAGATTGAC CGGGTGGTCCTGAACTTGCTCAAGCTTCAACTGGTCGAAGTGCTGTGA
Transcript	>Agabi119p4\|785250 ATGGGAAAGGCAGATGCATTAAGCAGAAGACCTGACTTCGAACAAGGATCAAAGGATGATAACAAGGATCAAACC TTGTTGAAACCAGAATATTTTGCAATTCGAGCAATGGAAGAGGGTCATATGTTAATCAATGCCGAGGAGGAGAAG ATATTAGAGGAAATCAGAAAATCAGAAGCAAGAGAAGATGACGTGGTGAAAGCGGTAGAAGAGATGAAGCAAGCA AAAGTGAAGTCGTTGAGGGGAGACAAGTGGAAGTTGGAAGAAGGATTAGTGCTGAAGAAAGGCAAAGTCTATGTG CCGAAGGATGAGACGTTAAGGACAAAAATCATTCGACTACATCACAATACCCCCATTGCCGGACACAGAGGACAA TGGAAGACAGTAGAAATGGTGACGCGCAATTACTGGTGGCCAGGCGTCACTAAGCAAGTCCAGAACAAGATTGAC CGGGTGGTCCTGAACTTGCTCAAGCTTCAACTGGTCGAAGTGCTGTGA
Gene	>Agabi119p4\|785250 ATGGGAAAGGCAGATGCATTAAGCAGAAGACCTGACTTCGAACAAGGATCAAAGGATGATAACAAGGATCAAACC TTGTTGAAACCAGAATATTTTGCAATTCGAGCAATGGAAGAGGGTCATATGTTAATCAATGCCGAGGAGGAGAAG ATATTAGAGGAAATCAGAAAATCAGAAGCAAGAGAAGATGACGTGGTGAAAGCGGTAGAAGAGATGAAGCAAGCA AAAGTGAAGTCGTTGAGGGGAGACAAGTGGAAGTTGGAAGAAGGATTAGTGCTGAAGAAAGGCAAAGTCTATGTG CCGAAGGATGAGACGTTAAGGACAAAAATCATTCGACTACATCACAATACCCCCATTGCCGGACACAGAGGACAA TGGAAGACAGTAGAAATGGTGACGCGCAATTACTGGTGGCCAGGCGTCACTAAGCAAGTCCAGAAGTACGTGGAG GGATGCGATCAATGCCAACGAAACAAGAATTGACCAACACCACCAGCAGGAAAATTAATGCCAAACCCTATTTCC ACAAAACCATGGGCCGACGTATCTGTTGACTTCATAGTAAAATTGCCAGAATCCCAGGGAATGGACTCAATTTTA GTGGTGTGCGATTGATTTAGTAAAATGGCTCATTTCATCCTGACTACGGAAACAACATCAGCACTAGGACTGGCC AAGCTGTTTAGGGACCACGTATGGAAGTTGCATGGATTGCCAGAAACAGTAATCTCAGATAGGGGACCGCAGTTT GCTGCAGACTTTACAAAGGAATTGAATAAGATGTTGGGAATCGACACTAGGTTGTCTACGGCTTTTCACCCACAG ACTGATGGCCAGACAGAGTGAACCAATCAAGAGCTAGAACAATATCTCCAATCATTTGTTGATCATAAACAAACT GATTGGCCTGATTGGTTAGCAACGGCGGAGTTTTCCTATAACAATAAAGTACAATCATCAACAAAGGAAACTCCA TTTATGGTCAATGTGGGAAGACATCCGAGAACTGGCTTTGATCTCCGACGACAAGGCAATCACCCGGCAGCAGTA GAATTTGCGGACCGCATGAAACTTCAACACGAAGAAACTCAAGCGGCCCTAAAAAGGGCACAAGATGACATGCGG AGGTATGCAGATAGAGGCAGAGGGGAAGCGGTGAAATACAAAGTAGGAGATAAAGTTCTACTAGCTACCCGGGAC CTTCAAATCCAGGGACGACCTACCCGGAAACTTACGGAGAAATTCATCGGACCGTTGTAGAGGCAGAAATGGAAT ACGAAGCGTAGCTATGAGATAACCACACCAAGCTTCCAATACTGTGACTCGAAATGCGAGTTTGTGGGAGATAAA ACAATGTTAAAGTCTCGAAAGTATATATATAAATTCAATTAATAGCAAGATTGACCGGGTGGTCCTGAACTTGCT CAAGCTTCAACTGGTCGAAGTGCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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